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Select item 114465481.

The zinc-finger transcription factor Sfp1 imprints specific classes of mRNAs and links their synthesis to cytoplasmic decay

Moran Kelbert, Antonio Jordán-Pla, Lola de Miguel-Jiménez, José García-Martínez, Michael Selitrennik, Adi Guterman, Noa Henig, Sander Granneman, José E Pérez-Ortín, Sebastián Chávez, Mordechai Choder

eLife. 2024; 12: RP90766. Published online 2024 Oct 2. doi: 10.7554/eLife.90766

PMCID:: PMC11446548

Abstract Article PDF–7.1M

Select item 113023062.

Involvement of 2-deoxyglucose-6-phosphate phosphatases in facilitating resilience against ionic and osmotic stress in Saccharomyces cerevisiae

Chinmayee Awasthy, Zeinab Abdelmoghis Hefny, Wouter Van Genechten, Uwe Himmelreich, Patrick Van Dijck

Microbiol Spectr. 2024 Aug; 12(8): e00136-24. Published online 2024 Jul 2. doi: 10.1128/spectrum.00136-24

PMCID:: PMC11302306

Abstract Article PDF–1.4M

Select item 110241853.

The DEAD-box ATPase Dbp10/DDX54 initiates peptidyl transferase center formation during 60S ribosome biogenesis

Victor E. Cruz, Christine S. Weirich, Nagesh Peddada, Jan P. Erzberger

Nat Commun. 2024; 15: 3296. Published online 2024 Apr 17. doi: 10.1038/s41467-024-47616-7

PMCID:: PMC11024185

Abstract Article PDF–7.4M

Select item 108724774.

Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle

Michael J. O’Brien, Athar Ansari

Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.

Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968

PMCID:: PMC10872477

Abstract Article PDF–1.7M

Select item 108687275.

Adaptive preservation of orphan ribosomal proteins in chaperone-dispersed condensates

Asif Ali, Rania Garde, Olivia C. Schaffer, Jared A. M. Bard, Kabir Husain, Samantha Keyport Kik, Kathleen A. Davis, Sofia Luengo-Woods, Maya G. Igarashi, D. Allan Drummond, Allison H. Squires, David Pincus

Nat Cell Biol. Author manuscript; available in PMC 2024 Feb 15.

Published in final edited form as: Nat Cell Biol. 2023 Nov; 25(11): 1691–1703. Published online 2023 Oct 16. doi: 10.1038/s41556-023-01253-2

PMCID:: PMC10868727

Abstract Article PDF–7.0M

Select item 107700426.

Nuclear Hsp104 safeguards the dormant translation machinery during quiescence

Verena Kohler, Andreas Kohler, Lisa Larsson Berglund, Xinxin Hao, Sarah Gersing, Axel Imhof, Thomas Nyström, Johanna L. Höög, Martin Ott, Claes Andréasson, Sabrina Büttner

Nat Commun. 2024; 15: 315. Published online 2024 Jan 5. doi: 10.1038/s41467-023-44538-8

PMCID:: PMC10770042

Abstract Article PDF–5.1M

Select item 107001387.

The social and structural architecture of the yeast protein interactome

André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann

Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5

PMCID:: PMC10700138

Abstract Article PDF–20M

Select item 105211378.

Checkpoint kinase interaction with DNA polymerase alpha regulates replication progression during stress

Andreas Hadjicharalambous, Alex J. Whale, Geylani Can, J. Mark Skehel, Jonathan M. Houseley, Philip Zegerman

Version 1. Wellcome Open Res. 2023; 8: 327. Published online 2023 Jul 26. doi: 10.12688/wellcomeopenres.19617.1

PMCID:: PMC10521137

Abstract Article PDF–4.0M

Select item 103996209.

Design and Characterization of Rapid Optogenetic Circuits for Dynamic Control in Yeast Metabolic Engineering

Evan M. Zhao, Makoto A. Lalwani, Robert J. Lovelett, Sergio A. García-Echauri, Shannon M. Hoffman, Christopher L. Gonzalez, Jared E. Toettcher, Ioannis G. Kevrekidis, José L. Avalos

ACS Synth Biol. Author manuscript; available in PMC 2023 Aug 3.

Published in final edited form as: ACS Synth Biol. 2020 Dec 18; 9(12): 3254–3266. Published online 2020 Nov 24. doi: 10.1021/acssynbio.0c00305

PMCID:: PMC10399620

Abstract Article PDF–1.3M

Select item 1039889710.

Activation of CWI pathway through high hydrostatic pressure, enhancing glycerol efflux via the aquaglyceroporin Fps1 in Saccharomyces cerevisiae

Takahiro Mochizuki, Toshiki Tanigawa, Seiya Shindo, Momoka Suematsu, Yuki Oguchi, Tetsuo Mioka, Yusuke Kato, Mina Fujiyama, Eri Hatano, Masashi Yamaguchi, Hiroji Chibana, Fumiyoshi Abe

Mol Biol Cell. 2023 Aug 1; 34(9): ar92. Published online 2023 Aug 1. doi: 10.1091/mbc.E23-03-0086

PMCID:: PMC10398897

Abstract Article PDF–9.9M

Select item 983634811.

A synthetic genetic array screen for interactions with the RNA helicase DED1 during cell stress in budding yeast

Sara B Carey, Hannah M List, Ashwin Siby, Paolo Guerra, Timothy A Bolger

G3 (Bethesda) 2023 Jan; 13(1): jkac296. Published online 2022 Nov 21. doi: 10.1093/g3journal/jkac296

PMCID:: PMC9836348

Abstract Article PDF–857K

Select item 920981112.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 783610013.

Dynamic 3D proteomes reveal protein functional alterations at high resolution in situ

Valentina Cappelletti, Thomas Hauser, Ilaria Piazza, Monika Pepelnjak, Liliana Malinovska, Tobias Fuhrer, Yaozong Li, Christian Dörig, Paul Boersema, Ludovic Gillet, Jan Grossbach, Aurelien Dugourd, Julio Saez-Rodriguez, Andreas Beyer, Nicola Zamboni, Amedeo Caflisch, Natalie de Souza, Paola Picotti

Cell. 2021 Jan 21; 184(2): 545–559.e22. doi: 10.1016/j.cell.2020.12.021

PMCID:: PMC7836100

Abstract Article

Select item 731154114.

Single-particle imaging of stress-promoters induction reveals the interplay between MAPK signaling, chromatin and transcription factors

Victoria Wosika, Serge Pelet

Nat Commun. 2020; 11: 3171. Published online 2020 Jun 23. doi: 10.1038/s41467-020-16943-w

PMCID:: PMC7311541

Abstract Article PDF–2.8M

Select item 715103415.

Genetic Analysis of Peroxisomal Genes Required for Longevity in a Yeast Model of Citrin Deficiency

Chalongchai Chalermwat, Thitipa Thosapornvichai, Laran T. Jensen, Duangrurdee Wattanasirichaigoon

Diseases. 2020 Mar; 8(1): 2. Published online 2020 Jan 9. doi: 10.3390/diseases8010002

PMCID:: PMC7151034

Abstract Article PDF–5.7M

Select item 699938916.

Evaluation of pyruvate decarboxylase‐negative Saccharomyces cerevisiae strains for the production of succinic acid

Ahmed Zahoor, Felix T. F. Küttner, Lars M. Blank, Birgitta E. Ebert

Eng Life Sci. 2019 Oct; 19(10): 711–720. Published online 2019 Aug 29. doi: 10.1002/elsc.201900080

PMCID:: PMC6999389

Abstract Article PDF–421K

Select item 674345517.

Methylated metabolite of arsenite blocks glycerol production in yeast by inhibition of glycerol-3-phosphate dehydrogenase

Jongmin Lee, David E. Levin

Mol Biol Cell. 2019 Aug 1; 30(17): 2134–2140. doi: 10.1091/mbc.E19-04-0228

PMCID:: PMC6743455

Abstract Article PDF–554K

Select item 668908618.

The Hsp90 isoforms from S. cerevisiae differ in structure, function and client range

Hannah Girstmair, Franziska Tippel, Abraham Lopez, Katarzyna Tych, Frank Stein, Per Haberkant, Philipp Werner Norbert Schmid, Dominic Helm, Matthias Rief, Michael Sattler, Johannes Buchner

Nat Commun. 2019; 10: 3626. Published online 2019 Aug 9. doi: 10.1038/s41467-019-11518-w