PMC Links for GEO Profiles (Select 17691104) - PMC

Select item 77757611.

Abnormal neocortex arealization and Sotos-like syndrome–associated behavior in Setd2 mutant mice

Lichao Xu, Yue Zheng, Xuejing Li, Andi Wang, Dawei Huo, Qinglan Li, Shikang Wang, Zhiyuan Luo, Ying Liu, Fuqiang Xu, Xudong Wu, Min Wu, Yan Zhou

Sci Adv. 2021 Jan; 7(1): eaba1180. Published online 2021 Jan 1. doi: 10.1126/sciadv.aba1180

PMCID:: PMC7775761

Abstract Article PDF–11M

Select item 73734312.

Clustered gamma-protocadherins regulate cortical interneuron programmed cell death

Walter R Mancia Leon, Julien Spatazza, Benjamin Rakela, Ankita Chatterjee, Viraj Pande, Tom Maniatis, Andrea R Hasenstaub, Michael P Stryker, Arturo Alvarez-Buylla

eLife. 2020; 9: e55374. Published online 2020 Jul 7. doi: 10.7554/eLife.55374

PMCID:: PMC7373431

Abstract Article PDF–11M

Select item 66655633.

Protocadherin-α Family Is Required for Serotonergic Projections to Appropriately Innervate Target Brain Areas

Shota Katori, Shun Hamada, Yukiko Noguchi, Emi Fukuda, Toshifumi Yamamoto, Hideko Yamamoto, Sonoko Hasegawa, Takeshi Yagi

J Neurosci. 2009 Jul 22; 29(29): 9137–9147. doi: 10.1523/JNEUROSCI.5478-08.2009

PMCID:: PMC6665563

Abstract Article PDF–6.6M

Select item 63316524.

CTCF Governs the Identity and Migration of MGE-Derived Cortical Interneurons

Adrienne Elbert, Daniel Vogt, Ashley Watson, Michael Levy, Yan Jiang, Emilie Brûlé, Megan E. Rowland, John Rubenstein, Nathalie G. Bérubé

J Neurosci. 2019 Jan 2; 39(1): 177–192. doi: 10.1523/JNEUROSCI.3496-17.2018

PMCID:: PMC6331652

Abstract Article PDF–5.8M

Select item 62980405.

Irisin Mediates Effects on Bone and Fat via αV Integrin Receptors

Hyeonwoo Kim, Christiane D. Wrann, Mark Jedrychowski, Sara Vidoni, Yukiko Kitase, Kenichi Nagano, Chenhe Zhou, Joshua Chou, Virginia-Jeni A. Parkman, Scott J. Novick, Timothy S. Strutzenberg, Bruce D. Pascal, Phuong T. Le, Daniel J. Brooks, Alexander M. Roche, Kaitlyn K. Gerber, Laura Mattheis, Wenjing Chen, Hua Tu, Mary L. Bouxsein, Patrick R. Griffin, Roland Baron, Clifford J. Rosen, Lynda F. Bonewald, Bruce M. Spiegelman

Cell. Author manuscript; available in PMC 2019 Dec 13.

Published in final edited form as: Cell. 2018 Dec 13; 175(7): 1756–1768.e17. doi: 10.1016/j.cell.2018.10.025

Correction in:: Cell. 2019 Jul 11; 178(2): 507–508.

PMCID:: PMC6298040

Abstract Article PDF–1.2M

Select item 60478866.

Alpha protocadherins and Pyk2 kinase regulate cortical neuron migration and cytoskeletal dynamics via Rac1 GTPase and WAVE complex in mice

Li Fan, Yichao Lu, Xiulian Shen, Hong Shao, Lun Suo, Qiang Wu

eLife. 2018; 7: e35242. Published online 2018 Jun 18. doi: 10.7554/eLife.35242

PMCID:: PMC6047886

Abstract Article PDF–13M

Select item 48733347.

Structural basis of diverse homophilic recognition by clustered α- and β-protocadherins

Kerry Marie Goodman, Rotem Rubinstein, Chan Aye Thu, Fabiana Bahna, Seetha Mannepalli, Göran Ahlsén, Chelsea Rittenhouse, Tom Maniatis, Barry Honig, Lawrence Shapiro

Neuron. Author manuscript; available in PMC 2017 May 18.

Published in final edited form as: Neuron. 2016 May 18; 90(4): 709–723. Published online 2016 May 5. doi: 10.1016/j.neuron.2016.04.004

PMCID:: PMC4873334

Abstract Article PDF–3.4M

Select item 37539088.

Epigenetic Functions of Smchd1 Repress Gene Clusters on the Inactive X Chromosome and on Autosomes

Anne-Valerie Gendrel, Y. Amy Tang, Masako Suzuki, Jonathan Godwin, Tatyana B. Nesterova, John M. Greally, Edith Heard, Neil Brockdorff

Mol Cell Biol. 2013 Aug; 33(16): 3150–3165. doi: 10.1128/MCB.00145-13

PMCID:: PMC3753908

Abstract Article PDF–3.9M

Select item 31780599.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 302253410.

A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo

Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio

PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582

PMCID:: PMC3022534

Abstract Article PDF–3.8M

Select item 295512811.

Proteolytic processing of protocadherin proteins requires endocytosis

Sean M. Buchanan, Stefanie S. Schalm, Tom Maniatis

Proc Natl Acad Sci U S A. 2010 Oct 12; 107(41): 17774–17779. Published online 2010 Sep 27. doi: 10.1073/pnas.1013105107

PMCID:: PMC2955128

Abstract Article PDF–570K

Select item 292222312.

Phosphorylation of protocadherin proteins by the receptor tyrosine kinase Ret

Stefanie S. Schalm, Bryan A. Ballif, Sean M. Buchanan, Greg R. Phillips, Tom Maniatis

Proc Natl Acad Sci U S A. 2010 Aug 3; 107(31): 13894–13899. Published online 2010 Jun 25. doi: 10.1073/pnas.1007182107

PMCID:: PMC2922223

Abstract Article PDF–850K

Select item 190001113.

Combinatorial Expression of α- and γ-Protocadherins Alters Their Presenilin-Dependent Processing

Stefan Bonn, Peter H. Seeburg, Martin K. Schwarz

Mol Cell Biol. 2007 Jun; 27(11): 4121–4132. Published online 2007 Apr 2. doi: 10.1128/MCB.01708-06

PMCID:: PMC1900011

Abstract Article PDF–783K

Select item 52892814.

The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)

Genome Res. 2004 Oct; 14(10b): 2121–2127. doi: 10.1101/gr.2596504

Correction in:: Genome Res. 2006 Jun; 16(6): 804.

PMCID:: PMC528928

Abstract Article PDF–140K

Select item 31104815.

Comparative DNA Sequence Analysis of Mouse and Human Protocadherin Gene Clusters

Qiang Wu, Theresa Zhang, Jan-Fang Cheng, Youngwook Kim, Jane Grimwood, Jeremy Schmutz, Mark Dickson, James P. Noonan, Michael Q. Zhang, Richard M. Myers, Tom Maniatis

Genome Res. 2001 Mar; 11(3): 389–404. doi: 10.1101/gr.167301

PMCID:: PMC311048

Abstract Article PDF–1.7M

Select item 31099216.

RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer

Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki

Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600

PMCID:: PMC310992

Abstract Article PDF–3.4M

Select item 31098017.

Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes

Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki

Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100

PMCID:: PMC310980

Abstract Article PDF–1.4M

Select item 18642218.

Molecular mechanisms governing Pcdh-γ gene expression: Evidence for a multiple promoter and cis-alternative splicing model

Xiaozhong Wang, Hong Su, Allan Bradley

Genes Dev. 2002 Aug 1; 16(15): 1890–1905. doi: 10.1101/gad.1004802

PMCID:: PMC186422

Abstract Article PDF–838K

Select item 13924119.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Mammalian Gene Collection (MGC) Program Team

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899

PMCID:: PMC139241

Abstract Article PDF–118K

Select item 1620320.

Large exons encoding multiple ectodomains are a characteristic feature of protocadherin genes

Qiang Wu, Tom Maniatis

Proc Natl Acad Sci U S A. 2000 Mar 28; 97(7): 3124–3129. Published online 2000 Mar 14. doi: 10.1073/pnas.060027397

PMCID:: PMC16203

Abstract Article PDF–254K

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