PMC Links for GEO Profiles (Select 17900994) - PMC

Select item 87546371.

Genome-wide chromosomal association of Upf1 is linked to Pol II transcription in Schizosaccharomyces pombe

Sandip De, David M Edwards, Vibha Dwivedi, Jianming Wang, Wazeer Varsally, Hannah L Dixon, Anand K Singh, Precious O Owuamalam, Matthew T Wright, Reece P Summers, Md Nazmul Hossain, Emily M Price, Marcin W Wojewodzic, Francesco Falciani, Nikolas J Hodges, Marco Saponaro, Kayoko Tanaka, Claus M Azzalin, Peter Baumann, Daniel Hebenstreit, Saverio Brogna

Nucleic Acids Res. 2022 Jan 11; 50(1): 350–367. Published online 2021 Dec 20. doi: 10.1093/nar/gkab1249

PMCID:: PMC8754637

Article PDF–3.4M

Select item 84410492.

Transcription and chromatin-based surveillance mechanism controls suppression of cryptic antisense transcription

Dong-Hyuk Heo, Krzysztof Kuś, Pawel Grzechnik, Sue Mei Tan-Wong, Adrien Birot, Tea Kecman, Soren Nielsen, Nikolay Zenkin, Lidia Vasiljeva

Cell Rep. 2021 Sep 7; 36(10): 109671. Published online 2021 Sep 7. doi: 10.1016/j.celrep.2021.109671

PMCID:: PMC8441049

Article

Select item 63098533.

Clr4/Suv39 and RNA Quality Control Factors Cooperate to Trigger RNAi and Suppress Antisense RNA

Ke Zhang, Tamas Fischer, Rebecca L. Porter, Jothy Dhakshnamoorthy, Martin Zofall, Ming Zhou, Timothy Veenstra, Shiv I. S. Grewal

Science. Author manuscript; available in PMC 2018 Dec 28.

Published in final edited form as: Science. 2011 Mar 25; 331(6024): 1624–1627. doi: 10.1126/science.1198712

PMCID:: PMC6309853

Article PDF–1.4M

Select item 62654544.

Proteomic profiling and functional characterization of post-translational modifications of the fission yeast RNA exosome

Caroline Telekawa, François-Michel Boisvert, François Bachand

Nucleic Acids Res. 2018 Nov 30; 46(21): 11169–11183. Published online 2018 Oct 13. doi: 10.1093/nar/gky915

PMCID:: PMC6265454

Article PDF–6.3M

Select item 56087595.

A non-transcriptional role for the glucocorticoid receptor in mediating the cell stress response

Marina Ptushkina, Toryn Poolman, Mudassar Iqbal, Mark Ashe, Janni Petersen, Joanna Woodburn, Magnus Rattray, Anthony Whetton, David Ray

Sci Rep. 2017; 7: 12101. Published online 2017 Sep 21. doi: 10.1038/s41598-017-09722-z

PMCID:: PMC5608759

Article PDF–1.8M

Select item 53217446.

Chromatin remodeller Fun30^Fft3 induces nucleosome disassembly to facilitate RNA polymerase II elongation

Junwoo Lee, Eun Shik Choi, Hogyu David Seo, Keunsoo Kang, Joshua M. Gilmore, Laurence Florens, Michael P. Washburn, Joonho Choe, Jerry L. Workman, Daeyoup Lee

Nat Commun. 2017; 8: 14527. Published online 2017 Feb 20. doi: 10.1038/ncomms14527

PMCID:: PMC5321744

Article PDF–1.4M

Select item 41970477.

Yeast X-chromosome-associated protein 5 (Xap5) functions with H2A.Z to suppress aberrant transcripts

Shajahan Anver, Assen Roguev, Martin Zofall, Nevan J Krogan, Shiv I S Grewal, Stacey L Harmer

EMBO Rep. 2014 Aug; 15(8): 894–902. Published online 2014 Jun 23. doi: 10.15252/embr.201438902

PMCID:: PMC4197047

Article PDF–1.2M

Select item 40246418.

Post-transcriptional regulation of meiotic genes by a nuclear RNA silencing complex

Emily D. Egan, Craig R. Braun, Steven P. Gygi, Danesh Moazed

RNA. 2014 Jun; 20(6): 867–881. doi: 10.1261/rna.044479.114

PMCID:: PMC4024641

Article PDF–1.8M

Select item 40183559.

The S. pombe Translation Initiation Factor eIF4G Is Sumoylated and Associates with the SUMO Protease Ulp2

Jirapas Jongjitwimol, Min Feng, Lihong Zhou, Oliver Wilkinson, Lauren Small, Robert Baldock, Deborah L. Taylor, Duncan Smith, Lucas D. Bowler, Simon J. Morley, Felicity Z. Watts

PLoS One. 2014; 9(5): e94182. Published online 2014 May 12. doi: 10.1371/journal.pone.0094182

PMCID:: PMC4018355

Article PDF–2.9M

Select item 390458510.

Functional characterization of Upf1 targets in Schizosaccharomyces pombe

Ana M. Matia-González, Ayesha Hasan, Gøril H. Moe, Juan Mata, Miguel A. Rodríguez-Gabriel

RNA Biol. 2013 Jun 1; 10(6): 1057–1065. Published online 2013 Apr 16. doi: 10.4161/rna.24569

PMCID:: PMC3904585

Article PDF–1.4M

Select item 383800411.

Poly(A) Tail-Mediated Gene Regulation by Opposing Roles of Nab2 and Pab2 Nuclear Poly(A)-Binding Proteins in Pre-mRNA Decay

Valérie Grenier St-Sauveur, Sharon Soucek, Anita H. Corbett, François Bachand

Mol Cell Biol. 2013 Dec; 33(23): 4718–4731. doi: 10.1128/MCB.00887-13

PMCID:: PMC3838004

Article PDF–1.9M

Select item 365032212.

Comprehensive Proteomics Analysis Reveals New Substrates and Regulators of the Fission Yeast Clp1/Cdc14 Phosphatase

Jun-Song Chen, Matthew R. Broadus, Janel R. McLean, Anna Feoktistova, Liping Ren, Kathleen L. Gould

Mol Cell Proteomics. 2013 May; 12(5): 1074–1086. Published online 2013 Jan 7. doi: 10.1074/mcp.M112.025924

PMCID:: PMC3650322

Article PDF–914K

Select item 338063613.

Hierarchical modularity and the evolution of genetic interactomes across species

Colm J. Ryan, Assen Roguev, Kristin Patrick, Jiewei Xu, Harlizawati Jahari, Zongtian Tong, Pedro Beltrao, Michael Shales, Hong Qu, Sean R. Collins, Joseph I. Kliegman, Lingli Jiang, Dwight Kuo, Elena Tosti, Hyun-Soo Kim, Winfried Edelmann, Michael-Christopher Keogh, Derek Greene, Chao Tang, Pádraig Cunningham, Kevan M. Shokat, Gerard Cagney, J. Peter Svensson, Christine Guthrie, Peter J. Espenshade, Trey Ideker, Nevan J. Krogan

Mol Cell. Author manuscript; available in PMC 2013 Jun 8.

Published in final edited form as: Mol Cell. 2012 Jun 8; 46(5): 691–704. doi: 10.1016/j.molcel.2012.05.028

PMCID:: PMC3380636

Article PDF–2.1M

Select item 308363314.

Yeast SREBP cleavage activation requires the Golgi Dsc E3 ligase complex

Emerson V. Stewart, Christine C. Nwosu, Zongtian Tong, Assen Roguev, Timothy D. Cummins, Dong-Uk Kim, Jacqueline Hayles, Han-Oh Park, Kwang-Lae Hoe, David W. Powell, Nevan J. Krogan, Peter J. Espenshade

Mol Cell. Author manuscript; available in PMC 2012 Apr 22.

Published in final edited form as: Mol Cell. 2011 Apr 22; 42(2): 160–171. doi: 10.1016/j.molcel.2011.02.035

PMCID:: PMC3083633

Article PDF–1.3M

Select item 257547515.

Significant conservation of synthetic lethal genetic interaction networks between distantly related eukaryotes

Scott J. Dixon, Yaroslav Fedyshyn, Judice L. Y. Koh, T. S. Keshava Prasad, Charly Chahwan, Gordon Chua, Kiana Toufighi, Anastasija Baryshnikova, Jacqueline Hayles, Kwang-Lae Hoe, Dong-Uk Kim, Han-Oh Park, Chad L. Myers, Akhilesh Pandey, Daniel Durocher, Brenda J. Andrews, Charles Boone

Proc Natl Acad Sci U S A. 2008 Oct 28; 105(43): 16653–16658. Published online 2008 Oct 17. doi: 10.1073/pnas.0806261105