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Items: 1 to 20 of 28

1.
CircInpp5b Ameliorates Renal Interstitial Fibrosis by Promoting the Lysosomal Degradation of DDX1
Xi Fang, Chengyuan Tang, Dong Zeng, Yi Shan, Qianfang Liu, Xuemin Yin, Ying Li
Biomolecules. 2024 Jun; 14(6): 613. Published online 2024 May 23. doi: 10.3390/biom14060613
PMCID:
PMC11201918
AbstractArticlePDF–6.7M
2.
The ATG5 interactome links clathrin-mediated vesicular trafficking with the autophagosome assembly machinery
Kiren Baines, Kazuaki Yoshioka, Yoh Takuwa, Jon D. Lane
Autophagy Rep. 2022; 1(1): 88–118. Published online 2022 Apr 7. doi: 10.1080/27694127.2022.2042054
PMCID:
PMC9015699
AbstractArticlePDF–3.3M
3.
OCRL regulates lysosome positioning and mTORC1 activity through SSX2IP‐mediated microtubule anchoring
Biao Wang, Wei He, Philipp P Prosseda, Liang Li, Tia J Kowal, Jorge A Alvarado, Qing Wang, Yang Hu, Yang Sun
EMBO Rep. 2021 Jul 5; 22(7): e52173. Published online 2021 May 13. doi: 10.15252/embr.202052173
PMCID:
PMC8406401
AbstractArticlePDF–3.1M
4.
BioID screening of biotinylation sites using the avidin-like protein Tamavidin 2-REV identifies global interactors of stimulator of interferon genes (STING)
Kou Motani, Hidetaka Kosako
J Biol Chem. 2020 Aug 7; 295(32): 11174–11183. Published online 2020 Jun 17. doi: 10.1074/jbc.RA120.014323
PMCID:
PMC7415991
AbstractArticlePDF–2.0M
5.
OCRL deficiency impairs endolysosomal function in a humanized mouse model for Lowe syndrome and Dent disease
Beatrice Paola Festa, Marine Berquez, Alkaly Gassama, Irmgard Amrein, Hesham M Ismail, Marijana Samardzija, Leopoldo Staiano, Alessandro Luciani, Christian Grimm, Robert L Nussbaum, Maria Antonietta De Matteis, Olivier M Dorchies, Leonardo Scapozza, David Paul Wolfer, Olivier Devuyst
Hum Mol Genet. 2019 Jun 15; 28(12): 1931–1946. Published online 2018 Dec 26. doi: 10.1093/hmg/ddy449
PMCID:
PMC6548226
AbstractArticlePDF–48M
6.
Kidney Tubular Ablation of Ocrl/Inpp5b Phenocopies Lowe Syndrome Tubulopathy
Kazunori Inoue, Daniel M. Balkin, Lijuan Liu, Ramiro Nandez, Yumei Wu, Xuefei Tian, Tong Wang, Robert Nussbaum, Pietro De Camilli, Shuta Ishibe
J Am Soc Nephrol. 2017 May; 28(5): 1399–1407. Published online 2016 Nov 28. doi: 10.1681/ASN.2016080913
PMCID:
PMC5407733
AbstractArticle
7.
A conditional knockout resource for the genome–wide study of mouse gene function
William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley
Nature. Author manuscript; available in PMC 2013 Feb 14.
Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163
PMCID:
PMC3572410
AbstractArticlePDF–1.1M
8.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
9.
Mouse Model for Lowe Syndrome/Dent Disease 2 Renal Tubulopathy
Susan P. Bothwell, Emily Chan, Isa M. Bernardini, Yien-Ming Kuo, William A. Gahl, Robert L. Nussbaum
J Am Soc Nephrol. 2011 Mar; 22(3): 443–448. doi: 10.1681/ASN.2010050565
PMCID:
PMC3060438
AbstractArticle
10.
A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo
Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio
PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582
PMCID:
PMC3022534
AbstractArticlePDF–3.8M
11.
Species-specific difference in expression and splice-site choice in Inpp5b, an inositol polyphosphate 5-phosphatase paralogous to the enzyme deficient in Lowe Syndrome
Susan P. Bothwell, Leslie W. Farber, Adam Hoagland, Robert L. Nussbaum
Mamm Genome. 2010; 21(9): 458–466. Published online 2010 Sep 26. doi: 10.1007/s00335-010-9281-7
PMCID:
PMC2974198
AbstractArticlePDF–546K
12.
Multivariate analysis of male reproductive function in Inpp5b−/− mice reveals heterogeneity in defects in fertility, sperm–egg membrane interaction and proteolytic cleavage of sperm ADAMs
Matthew R. Marcello, Janice P. Evans
Mol Hum Reprod. 2010 Jul; 16(7): 492–505. Published online 2010 Apr 19. doi: 10.1093/molehr/gaq029
PMCID:
PMC2882869
AbstractArticlePDF–508K
13.
X-inactivation analysis of embryonic lethality in Ocrlwt/−;Inpp5b−/− mice
David J. Bernard, Robert L. Nussbaum
Mamm Genome. 2010; 21(3): 186–194. Published online 2010 Feb 27. doi: 10.1007/s00335-010-9255-9
PMCID:
PMC2844970
AbstractArticlePDF–319K
14.
Phosphatidylinositol 3-Phosphate [PtdIns(3)P] Is Generated at the Plasma Membrane by an Inositol Polyphosphate 5-Phosphatase: Endogenous PtdIns(3)P Can Promote GLUT4 Translocation to the Plasma Membrane
Anne M. Kong, Kristy A. Horan, Absorn Sriratana, Charles G. Bailey, Luke J. Collyer, Harshal H. Nandurkar, Assia Shisheva, Meredith J. Layton, John E. J. Rasko, Tony Rowe, Christina A. Mitchell
Mol Cell Biol. 2006 Aug; 26(16): 6065–6081. doi: 10.1128/MCB.00203-06
PMCID:
PMC1592800
AbstractArticlePDF–1.1M
15.
Cracking the egg: molecular dynamics and evolutionary aspects of the transition from the fully grown oocyte to embryo
Alexei V. Evsikov, Joel H. Graber, J. Michael Brockman, Aleš Hampl, Andrea E. Holbrook, Priyam Singh, John J. Eppig, Davor Solter, Barbara B. Knowles
Genes Dev. 2006 Oct 1; 20(19): 2713–2727. doi: 10.1101/gad.1471006
PMCID:
PMC1578697
AbstractArticlePDF–1.7M
16.
BGEM: An In Situ Hybridization Database of Gene Expression in the Embryonic and Adult Mouse Nervous System
Susan Magdaleno, Patricia Jensen, Craig L Brumwell, Anna Seal, Karen Lehman, Andrew Asbury, Tony Cheung, Tommie Cornelius, Diana M Batten, Christopher Eden, Shannon M Norland, Dennis S Rice, Nilesh Dosooye, Sundeep Shakya, Perdeep Mehta, Tom Curran
PLoS Biol. 2006 Apr; 4(4): e86. Published online 2006 Mar 28. doi: 10.1371/journal.pbio.0040086
PMCID:
PMC1413568
ArticlePDF–99K
17.
Mammalian inositol polyphosphate 5-phosphatase II can compensate for the absence of all three yeast Sac1-like-domain-containing 5-phosphatases.
C J O'Malley, B K McColl, A M Kong, S L Ellis, A P Wijayaratnam, J Sambrook, C A Mitchell
Biochem J. 2001 May 1; 355(Pt 3): 805–817. doi: 10.1042/bj3550805
PMCID:
PMC1221798
SummaryPDF–411K
18.
Functional overlap between murine Inpp5b and Ocrl1 may explain why deficiency of the murine ortholog for OCRL1 does not cause Lowe syndrome in mice.
P A Jänne, S F Suchy, D Bernard, M MacDonald, J Crawley, A Grinberg, A Wynshaw-Boris, H Westphal, R L Nussbaum
J Clin Invest. 1998 May 15; 101(10): 2042–2053. doi: 10.1172/JCI2414
PMCID:
PMC508792
SummaryPDF–397K
19.
Targeting a Complex Transcriptome: The Construction of the Mouse Full-Length cDNA Encyclopedia
Piero Carninci, Kazunori Waki, Toshiyuki Shiraki, Hideaki Konno, Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Takahiro Arakawa, Yoshiyuki Ishii, Daisuke Sasaki, Hidemasa Bono, Shinji Kondo, Yuichi Sugahara, Rintaro Saito, Naoki Osato, Shiro Fukuda, Kenjiro Sato, Akira Watahiki, Tomoko Hirozane-Kishikawa, Mari Nakamura, Yuko Shibata, Ayako Yasunishi, Noriko Kikuchi, Atsushi Yoshiki, Moriaki Kusakabe, Stefano Gustincich, Kirk Beisel, William Pavan, Vassilis Aidinis, Akira Nakagawara, William A. Held, Hiroo Iwata, Tomohiro Kono, Hiromitsu Nakauchi, Paul Lyons, Christine Wells, David A. Hume, Michela Fagiolini, Takao K. Hensch, Michelle Brinkmeier, Sally Camper, Junji Hirota, Peter Mombaerts, Masami Muramatsu, Yasushi Okazaki, Jun Kawai, Yoshihide Hayashizaki
Genome Res. 2003 Jun; 13(6b): 1273–1289. doi: 10.1101/gr.1119703
PMCID:
PMC403712
AbstractArticlePDF–770K
20.
Construction of Long-Transcript Enriched cDNA Libraries from Submicrogram Amounts of Total RNAs by a Universal PCR Amplification Method
Yulan Piao, Naomi T. Ko, Meng K. Lim, Minoru S.H. Ko
Genome Res. 2001 Sep; 11(9): 1553–1558. doi: 10.1101/gr.185501
PMCID:
PMC311119
AbstractArticlePDF–743K

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