PMC Links for GEO Profiles (Select 183670) - PMC

Asif Ali, Rania Garde, Olivia C. Schaffer, Jared A. M. Bard, Kabir Husain, Samantha Keyport Kik, Kathleen A. Davis, Sofia Luengo-Woods, Maya G. Igarashi, D. Allan Drummond, Allison H. Squires, David Pincus

Nat Cell Biol. Author manuscript; available in PMC 2024 Feb 15.

Published in final edited form as: Nat Cell Biol. 2023 Nov; 25(11): 1691–1703. Published online 2023 Oct 16. doi: 10.1038/s41556-023-01253-2

PMCID:: PMC10868727

Abstract Article PDF–7.0M

Select item 107988584.

Fast-evolving cofactors regulate the role of HEATR5 complexes in intra-Golgi trafficking

Lucas J. Marmorale, Huan Jin, Thomas G. Reidy, Brandon Palomino-Alonso, Christopher J. Zysnarski, Fatima Jordan-Javed, Sagar Lahiri, Mara C. Duncan

J Cell Biol. 2024 Mar 4; 223(3): e202309047. Published online 2024 Jan 19. doi: 10.1083/jcb.202309047

PMCID:: PMC10798858

Abstract Article PDF–6.4M

Select item 107001385.

The social and structural architecture of the yeast protein interactome

André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann

Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5

PMCID:: PMC10700138

Abstract Article PDF–20M

Select item 106295566.

Mechanism of RanGTP priming H2A-H2B release from Kap114 in an atypical RanGTP•Kap114•H2A-H2B complex

Jenny Jiou, Joy M. Shaffer, Natalia E. Bernades, Ho Yee Joyce Fung, Juliana Kikumoto Dias, Sheena D’Arcy, Yuh Min Chook

Proc Natl Acad Sci U S A. 2023 Jul 18; 120(29): e2301199120. Published online 2023 Jul 14. doi: 10.1073/pnas.2301199120

PMCID:: PMC10629556

Abstract Article PDF–2.2M

Select item 103819657.

Cryo-EM structure of the complete inner kinetochore of the budding yeast point centromere

Tom Dendooven, Ziguo Zhang, Jing Yang, Stephen H. McLaughlin, Johannes Schwab, Sjors H. W. Scheres, Stanislau Yatskevich, David Barford

Sci Adv. 2023 Jul; 9(30): eadg7480. Published online 2023 Jul 28. doi: 10.1126/sciadv.adg7480

PMCID:: PMC10381965

Abstract Article PDF–2.1M

Select item 103552878.

A SAM-key domain required for enzymatic activity of the Fun30 nucleosome remodeler

Leonhard A Karl, Lorenzo Galanti, Susanne CS Bantele, Felix Metzner, Barbara Šafarić, Lional Rajappa, Benjamin Foster, Vanessa Borges Pires, Priyanka Bansal, Erika Chacin, Jerôme Basquin, Karl E Duderstadt, Christoph F Kurat, Till Bartke, Karl-Peter Hopfner, Boris Pfander

Life Sci Alliance. 2023 Sep; 6(9): e202201790. Published online 2023 Jul 19. doi: 10.26508/lsa.202201790

PMCID:: PMC10355287

Abstract Article PDF–3.3M

Select item 102333689.

A systematic proximity ligation approach to studying protein‐substrate specificity identifies the substrate spectrum of the Ssh1 translocon

Nir Cohen, Naama Aviram, Maya Schuldiner

EMBO J. 2023 Jun; 42(11): e113385. Published online 2023 Apr 19. doi: 10.15252/embj.2022113385

PMCID:: PMC10233368

Abstract Article PDF–1.2M

Select item 963098610.

A balancing act: interactions within NuA4/TIP60 regulate picNuA4 function in Saccharomyces cerevisiae and humans

Phoebe Y T Lu, Alyssa C Kirlin, Maria J Aristizabal, Hilary T Brewis, Nancy Lévesque, Dheva T Setiaputra, Nikita Avvakumov, Joris J Benschop, Marian Groot Koerkamp, Frank C P Holstege, Nevan J Krogan, Calvin K Yip, Jacques Côté, Michael S Kobor

Genetics. 2022 Nov; 222(3): iyac136. Published online 2022 Sep 6. doi: 10.1093/genetics/iyac136

PMCID:: PMC9630986

Abstract Article PDF–2.2M

Select item 935157011.

A hexasome is the preferred substrate for the INO80 chromatin remodeling complex, allowing versatility of function

Laura J. Hsieh, Muryam A. Gourdet, Camille M. Moore, Elise N. Muñoz, Nathan Gamarra, Vijay Ramani, Geeta J. Narlikar

Mol Cell. Author manuscript; available in PMC 2023 Jun 2.

Published in final edited form as: Mol Cell. 2022 Jun 2; 82(11): 2098–2112.e4. Published online 2022 May 20. doi: 10.1016/j.molcel.2022.04.026

PMCID:: PMC9351570

Abstract Article PDF–2.2M

Select item 920981112.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 900791713.

Identification of 14-3-3 Proteins, Polo kinase, and RNA-binding protein Pes4 as Key Regulators of Meiotic Commitment in Budding Yeast

Janardan N. Gavade, Chris M. Puccia, S. Grace Herod, Jonathan C. Trinidad, Luke E. Berchowitz, Soni Lacefield

Curr Biol. Author manuscript; available in PMC 2023 Apr 11.

Published in final edited form as: Curr Biol. 2022 Apr 11; 32(7): 1534–1547.e9. Published online 2022 Mar 2. doi: 10.1016/j.cub.2022.02.022

PMCID:: PMC9007917

Abstract Article PDF–2.2M

Select item 888653114.

Spt5 histone binding activity preserves chromatin during transcription by RNA polymerase II

Cecile Evrin, Albert Serra‐Cardona, Shoufu Duan, Progya P Mukherjee, Zhiguo Zhang, Karim P M Labib

EMBO J. 2022 Mar 1; 41(5): e109783. Published online 2022 Feb 1. doi: 10.15252/embj.2021109783

PMCID:: PMC8886531

Abstract Article PDF–1.4M

Select item 867592615.

What makes a histone variant a variant: Changing H2A to become H2A.Z

Hilary T. Brewis, Alice Y. Wang, Aline Gaub, Justine J. Lau, Peter C. Stirling, Michael S. Kobor

PLoS Genet. 2021 Dec; 17(12): e1009950. Published online 2021 Dec 6. doi: 10.1371/journal.pgen.1009950

PMCID:: PMC8675926

Abstract Article PDF–3.6M

Select item 860801616.

DNA Damage-Induced Phosphorylation of Histone H2A at Serine 15 Is Linked to DNA End Resection

Salar Ahmad, Valérie Côté, Jacques Côté

Mol Cell Biol. 2021 Dec; 41(12): e00056-21. Prepublished online 2021 Sep 27. Published online 2021 Nov 22. doi: 10.1128/MCB.00056-21

PMCID:: PMC8608016

Abstract Article PDF–2.2M

Select item 855165417.

Replication stress inhibits synthesis of histone mRNAs in yeast by removing Spt10p and Spt21p from the histone promoters

Madhura Bhagwat, Shreya Nagar, Pritpal Kaur, Riddhi Mehta, Ivana Vancurova, Ales Vancura

J Biol Chem. 2021 Nov; 297(5): 101246. Published online 2021 Sep 25. doi: 10.1016/j.jbc.2021.101246

PMCID:: PMC8551654

Abstract Article PDF–3.5M

Select item 842120418.

Investigation of RNA metabolism through large-scale genetic interaction profiling in yeast

Laurence Decourty, Christophe Malabat, Emmanuel Frachon, Alain Jacquier, Cosmin Saveanu

Nucleic Acids Res. 2021 Sep 7; 49(15): 8535–8555. Published online 2021 Aug 6. doi: 10.1093/nar/gkab680

PMCID:: PMC8421204

Abstract Article PDF–2.9M

Select item 837314219.

The conserved Tpk1 regulates non-homologous end joining double-strand break repair by phosphorylation of Nej1, a homolog of the human XLF

Matthew Jessulat, Shahreen Amin, Mohsen Hooshyar, Ramy Malty, Mohamed Taha Moutaoufik, Mara Zilocchi, Zoe Istace, Sadhna Phanse, Hiroyuki Aoki, Katayoun Omidi, Daniel Burnside, Bahram Samanfar, Khaled A Aly, Ashkan Golshani, Mohan Babu

Nucleic Acids Res. 2021 Aug 20; 49(14): 8145–8160. Published online 2021 Jul 9. doi: 10.1093/nar/gkab585