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Select item 111235661.

CaMKII inhibition due to TRIC-B loss-of-function dysregulates SMAD signalling in osteogenesis imperfecta

Roberta Besio, Barbara M. Contento, Nadia Garibaldi, Marta Filibian, Stephan Sonntag, Doron Shmerling, Francesca Tonelli, Marco Biggiogera, Marisa Brini, Andrea Salmaso, Milena Jovanovic, Joan C. Marini, Antonio Rossi, Antonella Forlino

Matrix Biol. Author manuscript; available in PMC 2024 Jun 1.

Published in final edited form as: Matrix Biol. 2023 Jun; 120: 43–59. Published online 2023 May 11. doi: 10.1016/j.matbio.2023.05.002

PMCID:: PMC11123566

Abstract Article PDF–2.6M

Select item 107333782.

Atypical cell death and insufficient matrix organization in long-bone growth plates from Tric-b-knockout mice

Atsuhiko Ichimura, Yuu Miyazaki, Hiroki Nagatomo, Takaaki Kawabe, Nobuhisa Nakajima, Ga Eun Kim, Masato Tomizawa, Naoki Okamoto, Shinji Komazaki, Sho Kakizawa, Miyuki Nishi, Hiroshi Takeshima

Cell Death Dis. 2023 Dec; 14(12): 848. Published online 2023 Dec 20. doi: 10.1038/s41419-023-06285-y

PMCID:: PMC10733378

Abstract Article PDF–4.2M

Select item 106349673.

Absence of TRIC-B from type XIV Osteogenesis Imperfecta osteoblasts alters cell adhesion and mitochondrial function – A multi-omics study

Milena Jovanovic, Apratim Mitra, Roberta Besio, Barbara Maria Contento, Ka Wai Wong, Alberta Derkyi, Michael To, Antonella Forlino, Ryan K Dale, Joan C Marini

Matrix Biol. Author manuscript; available in PMC 2024 Aug 1.

Published in final edited form as: Matrix Biol. 2023 Aug; 121: 127–148. Published online 2023 Jun 20. doi: 10.1016/j.matbio.2023.06.004

PMCID:: PMC10634967

Abstract Article PDF–3.0M

Select item 79387704.

BraInMap elucidates the macromolecular connectivity landscape of mammalian brain

Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili

Cell Syst. Author manuscript; available in PMC 2021 Apr 22.

Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003

Correction in:: Cell Syst. 2020 Aug 26; 11(2): 208.

PMCID:: PMC7938770

Abstract Article PDF–2.0M

Select item 77518665.

Decreased cardiac pacemaking and attenuated β-adrenergic response in TRIC-A knockout mice

Manabu Murakami, Yuichi Toyama, Manabu Yonekura, Takayoshi Ohba, Yasushi Matsuzaki, Daisuke Sawamura, Agnieszka M. Murakami, Miyuki Nishi, Shirou Itagaki, Hirofumi Tomita, Hiroshi Takeshima

PLoS One. 2020; 15(12): e0244254. Published online 2020 Dec 21. doi: 10.1371/journal.pone.0244254

PMCID:: PMC7751866

Abstract Article PDF–862K

Select item 74159916.

BioID screening of biotinylation sites using the avidin-like protein Tamavidin 2-REV identifies global interactors of stimulator of interferon genes (STING)

Kou Motani, Hidetaka Kosako

J Biol Chem. 2020 Aug 7; 295(32): 11174–11183. Published online 2020 Jun 17. doi: 10.1074/jbc.RA120.014323

PMCID:: PMC7415991

Abstract Article PDF–2.0M

Select item 65678527.

Enhanced activity of multiple TRIC‐B channels: an endoplasmic reticulum/sarcoplasmic reticulum mechanism to boost counterion currents

Fiona O'Brien, David Eberhardt, Katja Witschas, Sam El‐Ajouz, Tsunaki Iida, Miyuki Nishi, Hiroshi Takeshima, Rebecca Sitsapesan, Elisa Venturi

J Physiol. 2019 May 15; 597(10): 2691–2705. Published online 2019 Apr 14. doi: 10.1113/JP277241

PMCID:: PMC6567852

Abstract Article PDF–1.1M

Select item 46232098.

Subconductance Gating and Voltage Sensitivity of Sarcoplasmic Reticulum K⁺ Channels: A Modeling Approach

Antoni Matyjaszkiewicz, Elisa Venturi, Fiona O’Brien, Tsunaki Iida, Miyuki Nishi, Hiroshi Takeshima, Krasimira Tsaneva-Atanasova, Rebecca Sitsapesan

Biophys J. 2015 Jul 21; 109(2): 265–276. Published online 2015 Jul 21. doi: 10.1016/j.bpj.2015.06.020

PMCID:: PMC4623209

Abstract Article PDF–1007K

Select item 44721259.

High-throughput screening of mouse gene knockouts identifies established and novel skeletal phenotypes

Robert Brommage, Jeff Liu, Gwenn M Hansen, Laura L Kirkpatrick, David G Potter, Arthur T Sands, Brian Zambrowicz, David R Powell, Peter Vogel

Bone Res. 2014; 2: 14034. Published online 2014 Oct 28. doi: 10.1038/boneres.2014.34

PMCID:: PMC4472125

Abstract Article PDF–1.6M

Select item 395525410.

TRIC Channels and Sarcoplasmic/Endoplasmic Reticulum Calcium Homeostasis

Xinyu Zhou, Peihui Lin, Daiju Yamazaki, Ki Ho Park, Shinji Komazaki, S.R. Wayne Chen, Hiroshi Takeshima, Jianjie Ma

Circ Res. Author manuscript; available in PMC 2015 Feb 14.

Published in final edited form as: Circ Res. 2014 Feb 14; 114(4): 706–716. doi: 10.1161/CIRCRESAHA.114.301816

Correction in:: Circ Res. 2020 May 8; 126(10): e119.

PMCID:: PMC3955254

Abstract Article PDF–3.2M

Select item 373280111.

TRIC-B channels display labile gating: evidence from the TRIC-A knockout mouse model

Elisa Venturi, Antoni Matyjaszkiewicz, Samantha J. Pitt, Krasimira Tsaneva-Atanasova, Miyuki Nishi, Daiju Yamazaki, Hiroshi Takeshima, Rebecca Sitsapesan

Pflugers Arch. 2013; 465(8): 1135–1148. Published online 2013 Mar 7. doi: 10.1007/s00424-013-1251-y

PMCID:: PMC3732801

Abstract Article PDF–3.5M

Select item 366871912.

Facilitated Hyperpolarization Signaling in Vascular Smooth Muscle-overexpressing TRIC-A Channels

Shengchen Tao, Daiju Yamazaki, Shinji Komazaki, Chengzhu Zhao, Tsunaki Iida, Sho Kakizawa, Yuji Imaizumi, Hiroshi Takeshima

J Biol Chem. 2013 May 31; 288(22): 15581–15589. Published online 2013 Apr 16. doi: 10.1074/jbc.M112.435396

PMCID:: PMC3668719

Abstract Article PDF–2.3M

Select item 357241013.

A conditional knockout resource for the genome–wide study of mouse gene function

William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley

Nature. Author manuscript; available in PMC 2013 Feb 14.

Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163

PMCID:: PMC3572410

Abstract Article PDF–1.1M

Select item 302253414.

A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo

Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio

PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582

PMCID:: PMC3022534

Abstract Article PDF–3.8M

Select item 272934815.

Essential role of the TRIC-B channel in Ca²⁺ handling of alveolar epithelial cells and in perinatal lung maturation

Daiju Yamazaki, Shinji Komazaki, Hiroki Nakanishi, Aya Mishima, Miyuki Nishi, Masayuki Yazawa, Tetsuo Yamazaki, Ryo Taguchi, Hiroshi Takeshima

Development. 2009 Jul 15; 136(14): 2355–2361. Published online 2009 Jun 10. doi: 10.1242/dev.036798

PMCID:: PMC2729348

Abstract Article

Select item 255627016.

Large-scale gene trapping in C57BL/6N mouse embryonic stem cells

Gwenn M. Hansen, Diane C. Markesich, Michael B. Burnett, Qichao Zhu, Karen M. Dionne, Lizabeth J. Richter, Richard H. Finnell, Arthur T. Sands, Brian P. Zambrowicz, Alejandro Abuin

Genome Res. 2008 Oct; 18(10): 1670–1679. doi: 10.1101/gr.078352.108

PMCID:: PMC2556270

Abstract Article PDF–493K

Select item 31099217.

RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer

Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki

Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600

PMCID:: PMC310992

Abstract Article PDF–3.4M

Select item 31098018.

Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes

Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki

Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100

PMCID:: PMC310980

Abstract Article PDF–1.4M

Select item 28355419.

Wnk1 kinase deficiency lowers blood pressure in mice: A gene-trap screen to identify potential targets for therapeutic intervention

Brian P. Zambrowicz, Alejandro Abuin, Ramiro Ramirez-Solis, Lizabeth J. Richter, James Piggott, Hector BeltrandelRio, Eric C. Buxton, Joel Edwards, Rick A. Finch, Carl J. Friddle, Anupma Gupta, Gwenn Hansen, Yi Hu, Wenhu Huang, Crystal Jaing, Billie Wayne Key, Jr., Peter Kipp, Buckley Kohlhauff, Zhi-Qing Ma, Diane Markesich, Robert Payne, David G. Potter, Ny Qian, Joseph Shaw, Jeff Schrick, Zheng-Zheng Shi, Mary Jean Sparks, Isaac Van Sligtenhorst, Peter Vogel, Wade Walke, Nianhua Xu, Qichao Zhu, Christophe Person, Arthur T. Sands

Proc Natl Acad Sci U S A. 2003 Nov 25; 100(24): 14109–14114. Published online 2003 Nov 10. doi: 10.1073/pnas.2336103100

Correction in:: Proc Natl Acad Sci U S A. 2004 Mar 23; 101(12): 4332.

PMCID:: PMC283554

Abstract Article PDF–481K

Select item 18788520.

A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome

Jens Hansen, Thomas Floss, Petra Van Sloun, Ernst-Martin Füchtbauer, Franz Vauti, Hans-Hennig Arnold, Frank Schnütgen, Wolfgang Wurst, Harald von Melchner, Patricia Ruiz

Proc Natl Acad Sci U S A. 2003 Aug 19; 100(17): 9918–9922. Published online 2003 Aug 6. doi: 10.1073/pnas.1633296100

PMCID:: PMC187885

Abstract Article PDF–287K

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