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Items: 1 to 20 of 26

1.
TRIM67 drives tumorigenesis in oligodendrogliomas through Rho GTPase-dependent membrane blebbing
Engin Demirdizen, Ruslan Al-Ali, Ashwin Narayanan, Xueyuan Sun, Julianna Patricia Varga, Bianca Steffl, Manuela Brom, Damir Krunic, Claudia Schmidt, Gabriele Schmidt, Felix Bestvater, Julian Taranda, Şevin Turcan
Neuro Oncol. 2023 Jun; 25(6): 1031–1043. Published online 2022 Nov 22. doi: 10.1093/neuonc/noac233
PMCID:
PMC10237422
AbstractArticlePDF–23M
2.
Chr21 protein–protein interactions: enrichment in proteins involved in intellectual disability, autism, and late-onset Alzheimer’s disease
Julia Viard, Yann Loe-Mie, Rachel Daudin, Malik Khelfaoui, Christine Plancon, Anne Boland, Francisco Tejedor, Richard L Huganir, Eunjoon Kim, Makoto Kinoshita, Guofa Liu, Volker Haucke, Thomas Moncion, Eugene Yu, Valérie Hindie, Henri Bléhaut, Clotilde Mircher, Yann Herault, Jean-François Deleuze, Jean-Christophe Rain, Michel Simonneau, Aude-Marie Lepagnol-Bestel
Life Sci Alliance. 2022 Dec; 5(12): e202101205. Published online 2022 Aug 1. doi: 10.26508/lsa.202101205
PMCID:
PMC9348576
AbstractArticlePDF–3.0M
3.
Tankyrase regulates epithelial lumen formation via suppression of Rab11 GEFs
Arun A. Chandrakumar, Étienne Coyaud, Christopher B. Marshall, Mitsuhiko Ikura, Brian Raught, Robert Rottapel
J Cell Biol. 2021 Jul 5; 220(7): e202008037. Published online 2021 Jun 15. doi: 10.1083/jcb.202008037
PMCID:
PMC8221736
AbstractArticlePDF–4.4M
4.
Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome
Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi
Cell. Author manuscript; available in PMC 2022 May 27.
Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011
PMCID:
PMC8165030
AbstractArticlePDF–2.2M
5.
A reference map of the human binary protein interactome
Katja Luck, Dae-Kyum Kim, Luke Lambourne, Kerstin Spirohn, Bridget E. Begg, Wenting Bian, Ruth Brignall, Tiziana Cafarelli, Francisco J. Campos-Laborie, Benoit Charloteaux, Dongsic Choi, Atina G. Coté, Meaghan Daley, Steven Deimling, Alice Desbuleux, Amélie Dricot, Marinella Gebbia, Madeleine F. Hardy, Nishka Kishore, Jennifer J. Knapp, István A. Kovács, Irma Lemmens, Miles W. Mee, Joseph C. Mellor, Carl Pollis, Carles Pons, Aaron D. Richardson, Sadie Schlabach, Bridget Teeking, Anupama Yadav, Mariana Babor, Dawit Balcha, Omer Basha, Christian Bowman-Colin, Suet-Feung Chin, Soon Gang Choi, Claudia Colabella, Georges Coppin, Cassandra D’Amata, David De Ridder, Steffi De Rouck, Miquel Duran-Frigola, Hanane Ennajdaoui, Florian Goebels, Liana Goehring, Anjali Gopal, Ghazal Haddad, Elodie Hatchi, Mohamed Helmy, Yves Jacob, Yoseph Kassa, Serena Landini, Roujia Li, Natascha van Lieshout, Andrew MacWilliams, Dylan Markey, Joseph N. Paulson, Sudharshan Rangarajan, John Rasla, Ashyad Rayhan, Thomas Rolland, Adriana San-Miguel, Yun Shen, Dayag Sheykhkarimli, Gloria M. Sheynkman, Eyal Simonovsky, Murat Taşan, Alexander Tejeda, Vincent Tropepe, Jean-Claude Twizere, Yang Wang, Robert J. Weatheritt, Jochen Weile, Yu Xia, Xinping Yang, Esti Yeger-Lotem, Quan Zhong, Patrick Aloy, Gary D. Bader, Javier De Las Rivas, Suzanne Gaudet, Tong Hao, Janusz Rak, Jan Tavernier, David E. Hill, Marc Vidal, Frederick P. Roth, Michael A. Calderwood
Nature. Author manuscript; available in PMC 2020 Oct 8.
Published in final edited form as: Nature. 2020 Apr; 580(7803): 402–408. Published online 2020 Apr 8. doi: 10.1038/s41586-020-2188-x
PMCID:
PMC7169983
AbstractArticlePDF–5.4M
6.
trans-Fatty acids facilitate DNA damage-induced apoptosis through the mitochondrial JNK-Sab-ROS positive feedback loop
Yusuke Hirata, Aya Inoue, Saki Suzuki, Miki Takahashi, Ryosuke Matsui, Nozomu Kono, Takuya Noguchi, Atsushi Matsuzawa
Sci Rep. 2020; 10: 2743. Published online 2020 Feb 17. doi: 10.1038/s41598-020-59636-6
PMCID:
PMC7026443
AbstractArticlePDF–2.9M
7.
Elevated SH3BP5 Correlates with Poor Outcome and Contributes to the Growth of Acute Myeloid Leukemia Cells
Minjing Li, Shiyu Hao, Chunling Li, Huimin Xiao, Liyuan Sun, Zhenhai Yu, Naili Zhang, Yanlian Xiong, Dongmei Zhao, Yancun Yin
Biomolecules. 2019 Sep; 9(9): 505. Published online 2019 Sep 19. doi: 10.3390/biom9090505
PMCID:
PMC6770748
AbstractArticlePDF–3.1M
8.
HENA, heterogeneous network-based data set for Alzheimer’s disease
Elena Sügis, Jerome Dauvillier, Anna Leontjeva, Priit Adler, Valerie Hindie, Thomas Moncion, Vincent Collura, Rachel Daudin, Yann Loe-Mie, Yann Herault, Jean-Charles Lambert, Henning Hermjakob, Tal Pupko, Jean-Christophe Rain, Ioannis Xenarios, Jaak Vilo, Michel Simonneau, Hedi Peterson
Sci Data. 2019; 6: 151. Published online 2019 Aug 14. doi: 10.1038/s41597-019-0152-0
PMCID:
PMC6694132
AbstractArticlePDF–2.8M
9.
Structural determinants of Rab11 activation by the guanine nucleotide exchange factor SH3BP5
Meredith L. Jenkins, Jean Piero Margaria, Jordan T. B. Stariha, Reece M. Hoffmann, Jacob A. McPhail, David J. Hamelin, Martin J. Boulanger, Emilio Hirsch, John E. Burke
Nat Commun. 2018; 9: 3772. Published online 2018 Sep 14. doi: 10.1038/s41467-018-06196-z
PMCID:
PMC6138693
AbstractArticlePDF–3.9M
10.
Architecture of the human interactome defines protein communities and disease networks
Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper
Nature. Author manuscript; available in PMC 2017 Nov 17.
Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366
PMCID:
PMC5531611
AbstractArticlePDF–2.7M
11.
Expressions of SH3BP5, LMO3, and SNAP25 in diffuse large B‐cell lymphoma cells and their association with clinical features
Kyoko Kobayashi, Motoko Yamaguchi, Kana Miyazaki, Hiroshi Imai, Kaori Yokoe, Ryoichi Ono, Tetsuya Nosaka, Naoyuki Katayama
Cancer Med. 2016 Aug; 5(8): 1802–1809. Published online 2016 May 17. doi: 10.1002/cam4.753
PMCID:
PMC4873606
AbstractArticlePDF–371K
12.
REI/SH3BP5 protein family: New GEFs for Rab11
Ken Sato, Aisa Sakaguchi, Miyuki Sato
Cell Cycle. 2016; 15(6): 767–769. Published online 2016 Jan 8. doi: 10.1080/15384101.2015.1137710
PMCID:
PMC4845920
ArticlePDF–348K
13.
A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning
Koray Kırlı, Samir Karaca, Heinz Jürgen Dehne, Matthias Samwer, Kuan Ting Pan, Christof Lenz, Henning Urlaub, Dirk Görlich
eLife. 2015; 4: e11466. Published online 2015 Dec 17. doi: 10.7554/eLife.11466
PMCID:
PMC4764573
AbstractArticlePDF–5.7M
14.
The BioPlex Network: A Systematic Exploration of the Human Interactome
Edward L. Huttlin, Lily Ting, Raphael J. Bruckner, Fana Gebreab, Melanie P. Gygi, John Szpyt, Stanley Tam, Gabriela Zarraga, Greg Colby, Kurt Baltier, Rui Dong, Virginia Guarani, Laura Pontano Vaites, Alban Ordureau, Ramin Rad, Brian K. Erickson, Martin Wühr, Joel Chick, Bo Zhai, Deepak Kolippakkam, Julian Mintseris, Robert A. Obar, Tim Harris, Spyros Artavanis-Tsakonas, Mathew E. Sowa, Pietro DeCamilli, Joao A. Paulo, J. Wade Harper, Steven P. Gygi
Cell. Author manuscript; available in PMC 2016 Jul 16.
Published in final edited form as: Cell. 2015 Jul 16; 162(2): 425–440. doi: 10.1016/j.cell.2015.06.043
PMCID:
PMC4617211
AbstractArticlePDF–2.2M
15.
Sab (Sh3bp5) dependence of JNK mediated inhibition of mitochondrial respiration in palmitic acid induced hepatocyte lipotoxicity
Sanda Win, Tin Aung Than, Bao Han Allison Le, Carmen García-Ruiz, Jose C Fernandez-Checa, Neil Kaplowitz
J Hepatol. Author manuscript; available in PMC 2016 Jun 1.
Published in final edited form as: J Hepatol. 2015 Jun; 62(6): 1367–1374. Published online 2015 Feb 7. doi: 10.1016/j.jhep.2015.01.032
PMCID:
PMC4439305
AbstractArticlePDF–2.2M
16.
SH3-binding Protein 5 Mediates the Neuroprotective Effect of the Secreted Bioactive Peptide Humanin by Inhibiting c-Jun NH2-terminal Kinase
Yuji Takeshita, Yuichi Hashimoto, Mikiro Nawa, Hiroyuki Uchino, Masaaki Matsuoka
J Biol Chem. 2013 Aug 23; 288(34): 24691–24704. Published online 2013 Jul 16. doi: 10.1074/jbc.M113.469692
PMCID:
PMC3750166
AbstractArticlePDF–2.9M
17.
Genome-wide search for replicable risk gene regions in alcohol and nicotine co-dependence
Lingjun Zuo, Fengyu Zhang, Heping Zhang, Xiang-Yang Zhang, Fei Wang, Chiang-Shan R. Li, Lingeng Lu, Jiang Hong, Lin Lu, John Krystal, Hong-Wen Deng, Xingguang Luo
Am J Med Genet B Neuropsychiatr Genet. Author manuscript; available in PMC 2013 Jun 1.
Published in final edited form as: Am J Med Genet B Neuropsychiatr Genet. 2012 Jun; 159B(4): 437–444. Published online 2012 Apr 4. doi: 10.1002/ajmg.b.32047
PMCID:
PMC3405545
AbstractArticlePDF–937K
18.
Genome-Wide Association Study of Alcohol Dependence Implicates KIAA0040 on Chromosome 1q
Lingjun Zuo, Joel Gelernter, Clarence K Zhang, Hongyu Zhao, Lingeng Lu, Henry R Kranzler, Robert T Malison, Chiang-Shan R Li, Fei Wang, Xiang-Yang Zhang, Hong-Wen Deng, John H Krystal, Fengyu Zhang, Xingguang Luo
Neuropsychopharmacology. 2012 Jan; 37(2): 557–566. Published online 2011 Sep 28. doi: 10.1038/npp.2011.229
Correction in:
Neuropsychopharmacology. 2012 Jan; 37(2): 581–582.
PMCID:
PMC3242317
AbstractArticlePDF–490K
19.
Interactions of Pathological Hallmark Proteins: TUBULIN POLYMERIZATION PROMOTING PROTEIN/p25, β-AMYLOID, AND α-SYNUCLEIN
Judit Oláh, Orsolya Vincze, Dezső Virók, Dóra Simon, Zsolt Bozsó, Natália Tőkési, István Horváth, Emma Hlavanda, János Kovács, Anna Magyar, Mária Szűcs, Ferenc Orosz, Botond Penke, Judit Ovádi
J Biol Chem. 2011 Sep 30; 286(39): 34088–34100. Published online 2011 Aug 8. doi: 10.1074/jbc.M111.243907
PMCID:
PMC3190826
AbstractArticlePDF–5.7M
20.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M

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