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Select item 105718041.

Sedentary Behavior Impacts on the Epigenome and Transcriptome: Lessons from Muscle Inactivation in Drosophila Larvae

Avivit Brener, Dana Lorber, Adriana Reuveny, Hila Toledano, Lilach Porat-Kuperstein, Yael Lebenthal, Eviatar Weizman, Tsviya Olender, Talila Volk

Cells. 2023 Oct; 12(19): 2333. Published online 2023 Sep 22. doi: 10.3390/cells12192333

PMCID:: PMC10571804

Abstract Article PDF–1.3M

Select item 92394012.

Polyploidy in development and tumor models in Drosophila

Caique Almeida Machado Costa, Xian-Feng Wang, Calder Ellsworth, Wu-Min Deng

Semin Cancer Biol. Author manuscript; available in PMC 2023 Jun 1.

Published in final edited form as: Semin Cancer Biol. 2022 Jun; 81: 106–118. Published online 2021 Sep 22. doi: 10.1016/j.semcancer.2021.09.011

PMCID:: PMC9239401

Abstract Article PDF–1.2M

Select item 91347673.

Differential condensation of sister chromatids acts with Cdc6 to ensure asynchronous S-phase entry in Drosophila male germline stem cell lineage

Rajesh Ranjan, Jonathan Snedeker, Matthew Wooten, Carolina Chu, Sabrina Bracero, Taylar Mouton, Xin Chen

Dev Cell. Author manuscript; available in PMC 2023 May 9.

Published in final edited form as: Dev Cell. 2022 May 9; 57(9): 1102–1118.e7. Published online 2022 Apr 27. doi: 10.1016/j.devcel.2022.04.007

PMCID:: PMC9134767

Abstract Article PDF–4.0M

Select item 88130524.

Molecular determinants of phase separation for Drosophila DNA replication licensing factors

Matthew W Parker, Jonchee A Kao, Alvin Huang, James M Berger, Michael R Botchan

eLife. 2021; 10: e70535. Published online 2021 Dec 24. doi: 10.7554/eLife.70535

PMCID:: PMC8813052

Abstract Article PDF–4.6M

Select item 83792305.

Su(Hw) primes 66D and 7F Drosophila chorion genes loci for amplification through chromatin decondensation

Nadezhda E. Vorobyeva, Maksim Erokhin, Darya Chetverina, Alexey N. Krasnov, Marina Yu. Mazina

Sci Rep. 2021; 11: 16963. Published online 2021 Aug 20. doi: 10.1038/s41598-021-96488-0

PMCID:: PMC8379230

Abstract Article PDF–6.5M

Select item 76065236.

Understanding microcephaly through the study of centrosome regulation in Drosophila neural stem cells

Beverly V. Robinson, Victor Faundez, Dorothy A. Lerit

Biochem Soc Trans. Author manuscript; available in PMC 2020 Nov 3.

Published in final edited form as: Biochem Soc Trans. 2020 Oct 30; 48(5): 2101–2115. doi: 10.1042/BST20200261

PMCID:: PMC7606523

Abstract Article PDF–1.7M

Select item 74500967.

Structural mechanism for replication origin binding and remodeling by a metazoan origin recognition complex and its co-loader Cdc6

Jan Marten Schmidt, Franziska Bleichert

Nat Commun. 2020; 11: 4263. Published online 2020 Aug 26. doi: 10.1038/s41467-020-18067-7

PMCID:: PMC7450096

Abstract Article PDF–6.8M

Select item 74474508.

Polyploidy in the adult Drosophila brain

Shyama Nandakumar, Olga Grushko, Laura A Buttitta

eLife. 2020; 9: e54385. Published online 2020 Aug 25. doi: 10.7554/eLife.54385

PMCID:: PMC7447450

Abstract Article PDF–4.1M

Select item 69615789.

CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans

Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang

Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119

PMCID:: PMC6961578

Abstract Article PDF–3.6M

Select item 676482010.

A new class of disordered elements controls DNA replication through initiator self-assembly

Matthew W Parker, Maren Bell, Mustafa Mir, Jonchee A Kao, Xavier Darzacq, Michael R Botchan, James M Berger

eLife. 2019; 8: e48562. Published online 2019 Sep 27. doi: 10.7554/eLife.48562

PMCID:: PMC6764820

Abstract Article PDF–3.6M

Select item 672775011.

Unbiased Boolean analysis of public gene expression data for cell cycle gene identification

Sarah A. Dabydeen, Arshad Desai, Debashis Sahoo

Mol Biol Cell. 2019 Jul 1; 30(14): 1770–1779. doi: 10.1091/mbc.E19-01-0013

PMCID:: PMC6727750

Abstract Article PDF–5.4M

Select item 604214712.

Conformational control and DNA-binding mechanism of the metazoan origin recognition complex

Franziska Bleichert, Alexander Leitner, Ruedi Aebersold, Michael R. Botchan, James M. Berger

Proc Natl Acad Sci U S A. 2018 Jun 26; 115(26): E5906–E5915. Published online 2018 Jun 13. doi: 10.1073/pnas.1806315115

PMCID:: PMC6042147

Abstract Article PDF–2.1M

Select item 601019213.

Study of DNA replication in Drosophila using cell free in vitro system

Anton Svitin, Igor Chesnokov

Cell Cycle. Author manuscript; available in PMC 2018 Jun 20.

Published in final edited form as: Cell Cycle. 2010 Feb 15; 9(4): 815–819. Published online 2010 Feb 23. doi: 10.4161/cc.9.4.10730

PMCID:: PMC6010192

Abstract Article PDF–707K

Select item 570780514.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900215.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 558637916.

DNA Replication Control During Drosophila Development: Insights into the Onset of S Phase, Replication Initiation, and Fork Progression

Brian L. Hua, Terry L. Orr-Weaver

Genetics. 2017 Sep; 207(1): 29–47. Published online 2017 Aug 31. doi: 10.1534/genetics.115.186627

PMCID:: PMC5586379

Abstract Article PDF–1.2M

Select item 488965817.

mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster

Gildas Lepennetier, Francesco Catania

G3 (Bethesda) 2016 Jun; 6(6): 1617–1626. Published online 2016 Mar 28. doi: 10.1534/g3.116.029231

PMCID:: PMC4889658

Abstract Article PDF–1.5M

Select item 477787118.

Juvenile Hormone Activates the Transcription of Cell-division-cycle 6 (Cdc6) for Polyploidy-dependent Insect Vitellogenesis and Oogenesis

Zhongxia Wu, Wei Guo, Yingtian Xie, Shutang Zhou

J Biol Chem. 2016 Mar 4; 291(10): 5418–5427. Published online 2016 Jan 4. doi: 10.1074/jbc.M115.698936

PMCID:: PMC4777871

Abstract Article PDF–1.8M

Select item 473800519.

Proteome-wide dataset supporting the study of ancient metazoan macromolecular complexes

Sadhna Phanse, Cuihong Wan, Blake Borgeson, Fan Tu, Kevin Drew, Greg Clark, Xuejian Xiong, Olga Kagan, Julian Kwan, Alexandr Bezginov, Kyle Chessman, Swati Pal, Graham Cromar, Ophelia Papoulas, Zuyao Ni, Daniel R. Boutz, Snejana Stoilova, Pierre C. Havugimana, Xinghua Guo, Ramy H. Malty, Mihail Sarov, Jack Greenblatt, Mohan Babu, W. Brent Derry, Elisabeth R. Tillier, John B. Wallingford, John Parkinson, Edward M. Marcotte, Andrew Emili

Data Brief. 2016 Mar; 6: 715–721. Published online 2015 Dec 12. doi: 10.1016/j.dib.2015.11.062

PMCID:: PMC4738005

Abstract Article PDF–205K

Select item 452833020.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

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