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Items: 1 to 20 of 29

1.
The social and structural architecture of the yeast protein interactome
André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann
Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5
PMCID:
PMC10700138
AbstractArticlePDF–20M
2.
Checkpoint kinase interaction with DNA polymerase alpha regulates replication progression during stress
Andreas Hadjicharalambous, Alex J. Whale, Geylani Can, J. Mark Skehel, Jonathan M. Houseley, Philip Zegerman
Version 1. Wellcome Open Res. 2023; 8: 327. Published online 2023 Jul 26. doi: 10.12688/wellcomeopenres.19617.1
PMCID:
PMC10521137
AbstractArticlePDF–4.0M
3.
The Hsp90 molecular chaperone governs client proteins by targeting intrinsically disordered regions
Janhavi A. Kolhe, Neethu L. Babu, Brian C. Freeman
Mol Cell. Author manuscript; available in PMC 2024 Jun 15.
Published in final edited form as: Mol Cell. 2023 Jun 15; 83(12): 2035–2044.e7. Published online 2023 Jun 8. doi: 10.1016/j.molcel.2023.05.021
PMCID:
PMC10297700
AbstractArticlePDF–2.0M
4.
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources
Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry
Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224
PMCID:
PMC9209811
AbstractArticlePDF–818K
5.
Actin cytoskeletal inhibitor 19,20-epoxycytochalasin Q sensitizes yeast cells lacking ERG6 through actin-targeting and secondarily through disruption of lipid homeostasis
Kwanrutai Watchaputi, Pichayada Somboon, Nipatthra Phromma-in, Khanok Ratanakhanokchai, Nitnipa Soontorngun
Sci Rep. 2021; 11: 7779. Published online 2021 Apr 8. doi: 10.1038/s41598-021-87342-4
PMCID:
PMC8032726
AbstractArticlePDF–9.0M
6.
Chaperone-Mediated Protein Disaggregation Triggers Proteolytic Clearance of Intra-nuclear Protein Inclusions
Fabian den Brave, Lucas V. Cairo, Chandhuru Jagadeesan, Carmen Ruger-Herreros, Axel Mogk, Bernd Bukau, Stefan Jentsch
Cell Rep. 2020 Jun 2; 31(9): 107680. Published online 2020 Jun 2. doi: 10.1016/j.celrep.2020.107680
PMCID:
PMC7273177
AbstractArticle
7.
Recruitment of Cytosolic J-Proteins by TOM Receptors Promotes Mitochondrial Protein Biogenesis
Łukasz Opaliński, Jiyao Song, Chantal Priesnitz, Lena-Sophie Wenz, Silke Oeljeklaus, Bettina Warscheid, Nikolaus Pfanner, Thomas Becker
Cell Rep. 2018 Nov 20; 25(8): 2036–2043.e5. Published online 2018 Nov 20. doi: 10.1016/j.celrep.2018.10.083
PMCID:
PMC6280124
AbstractArticle
8.
Overexpression or Deletion of Ergosterol Biosynthesis Genes Alters Doubling Time, Response to Stress Agents, and Drug Susceptibility in Saccharomyces cerevisiae
Somanon Bhattacharya, Brooke D. Esquivel, Theodore C. White
mBio. 2018 Jul-Aug; 9(4): e01291-18. Published online 2018 Jul 24. doi: 10.1128/mBio.01291-18
PMCID:
PMC6058291
AbstractArticlePDF–2.4M
9.
The yeast protein kinase Sch9 adjusts V-ATPase assembly/disassembly to control pH homeostasis and longevity in response to glucose availability
Tobias Wilms, Erwin Swinnen, Elja Eskes, Laura Dolz-Edo, Alice Uwineza, Ruben Van Essche, Joëlle Rosseels, Piotr Zabrocki, Elisabetta Cameroni, Vanessa Franssens, Claudio De Virgilio, Gertien J. Smits, Joris Winderickx
PLoS Genet. 2017 Jun; 13(6): e1006835. Published online 2017 Jun 12. doi: 10.1371/journal.pgen.1006835
PMCID:
PMC5484544
AbstractArticlePDF–14M
10.
A novel translational control mechanism involving RNA structures within coding sequences
Jennifer Jungfleisch, Danny D. Nedialkova, Ivan Dotu, Katherine E. Sloan, Neus Martinez-Bosch, Lukas Brüning, Emanuele Raineri, Pilar Navarro, Markus T. Bohnsack, Sebastian A. Leidel, Juana Díez
Genome Res. 2017 Jan; 27(1): 95–106. doi: 10.1101/gr.209015.116
Correction in:
Genome Res. 2017 Apr; 27(4): 663.
PMCID:
PMC5204348
AbstractArticlePDF–1.3M
11.
Identification of Yeast Mutants Exhibiting Altered Sensitivity to Valinomycin and Nigericin Demonstrate Pleiotropic Effects of Ionophores on Cellular Processes
Michaela Jakubkova, Vladimira Dzugasova, Dominika Truban, Lenka Abelovska, Ingrid Bhatia-Kissova, Martin Valachovic, Vlasta Klobucnikova, Lucia Zeiselova, Peter Griac, Jozef Nosek, Lubomir Tomaska
PLoS One. 2016; 11(10): e0164175. Published online 2016 Oct 6. doi: 10.1371/journal.pone.0164175
PMCID:
PMC5053447
AbstractArticlePDF–3.1M
12.
One library to make them all: Streamlining yeast library creation by a SWAp-Tag (SWAT) strategy
Ido Yofe, Uri Weill, Matthias Meurer, Silvia Chuartzman, Einat Zalckvar, Omer Goldman, Shifra Ben-Dor, Conny Schütze, Nils Wiedemann, Michael Knop, Anton Khmelinskii, Maya Schuldiner
Nat Methods. Author manuscript; available in PMC 2016 Sep 22.
Published in final edited form as: Nat Methods. 2016 Apr; 13(4): 371–378. Published online 2016 Feb 29. doi: 10.1038/nmeth.3795
PMCID:
PMC4869835
AbstractArticlePDF–2.7M
13.
Protein-RNA networks revealed through covalent RNA marks
Christopher P. Lapointe, Daniel Wilinski, Harriet A. J. Saunders, Marvin Wickens
Nat Methods. Author manuscript; available in PMC 2016 May 18.
Published in final edited form as: Nat Methods. 2015 Dec; 12(12): 1163–1170. Published online 2015 Nov 2. doi: 10.1038/nmeth.3651
PMCID:
PMC4707952
AbstractArticlePDF–856K
14.
A Conserved Endoplasmic Reticulum Membrane Protein Complex (EMC) Facilitates Phospholipid Transfer from the ER to Mitochondria
Sujoy Lahiri, Jesse T. Chao, Shabnam Tavassoli, Andrew K. O. Wong, Vineet Choudhary, Barry P. Young, Christopher J. R. Loewen, William A. Prinz
PLoS Biol. 2014 Oct; 12(10): e1001969. Published online 2014 Oct 14. doi: 10.1371/journal.pbio.1001969
PMCID:
PMC4196738
AbstractArticlePDF–8.0M
15.
Pervasive and dynamic protein binding sites of the mRNA transcriptome in Saccharomyces cerevisiae
Mallory A Freeberg, Ting Han, James J Moresco, Andy Kong, Yu-Cheng Yang, Zhi John Lu, John R Yates, John K Kim
Genome Biol. 2013; 14(2): R13. Published online 2013 Feb 14. doi: 10.1186/gb-2013-14-2-r13
PMCID:
PMC4053964
AbstractArticlePDF–1.7M
16.
Arabidopsis ERG28 Tethers the Sterol C4-Demethylation Complex to Prevent Accumulation of a Biosynthetic Intermediate That Interferes with Polar Auxin Transport
Alexis Samba Mialoundama, Nurul Jadid, Julien Brunel, Thomas Di Pascoli, Dimitri Heintz, Mathieu Erhardt, Jérôme Mutterer, Marc Bergdoll, Daniel Ayoub, Alain Van Dorsselaer, Alain Rahier, Paul Nkeng, Philippe Geoffroy, Michel Miesch, Bilal Camara, Florence Bouvier
Plant Cell. 2013 Dec; 25(12): 4879–4893. Published online 2013 Dec 10. doi: 10.1105/tpc.113.115576
PMCID:
PMC3903993
AbstractArticlePDF–1.5M
17.
Mapping the functional yeast ABC transporter interactome
Jamie Snider, Asad Hanif, Mid Eum Lee, Ke Jin, Analyn R. Yu, Chris Graham, Matthew Chuk, Dunja Damjanovic, Marta Wierzbicka, Priscilla Tang, Dina Balderes, Victoria Wong, Matthew Jessulat, Katelyn D. Darowski, Bryan-Joseph San Luis, Igor Shevelev, Stephen L Sturley, Charles Boone, Jack F. Greenblatt, Zhaolei Zhang, Christian M. Paumi, Mohan Babu, Hay-Oak Park, Susan Michaelis, Igor Stagljar
Nat Chem Biol. Author manuscript; available in PMC 2014 Mar 1.
Published in final edited form as: Nat Chem Biol. 2013 Sep; 9(9): 565–572. Published online 2013 Jul 7. doi: 10.1038/nchembio.1293
PMCID:
PMC3835492
AbstractArticlePDF–1.2M
18.
The Molecular Mechanism of a Cis-Regulatory Adaptation in Yeast
Jessica Chang, Yiqi Zhou, Xiaoli Hu, Lucia Lam, Cameron Henry, Erin M. Green, Ryosuke Kita, Michael S. Kobor, Hunter B. Fraser
PLoS Genet. 2013 Sep; 9(9): e1003813. Published online 2013 Sep 19. doi: 10.1371/journal.pgen.1003813
PMCID:
PMC3778017
AbstractArticlePDF–889K
19.
Conformational dynamics control ubiquitin-deubiquitinase interactions and influence in vivo signaling
Aaron H. Phillips, Yingnan Zhang, Christian N. Cunningham, Lijuan Zhou, William F. Forrest, Peter S. Liu, Micah Steffek, James Lee, Christine Tam, Elizabeth Helgason, Jeremy M. Murray, Donald S. Kirkpatrick, Wayne J. Fairbrother, Jacob E. Corn
Proc Natl Acad Sci U S A. 2013 Jul 9; 110(28): 11379–11384. Published online 2013 Jun 25. doi: 10.1073/pnas.1302407110
PMCID:
PMC3710810
AbstractArticlePDF–1.0M
20.
Identification of dosage-sensitive genes in Saccharomyces cerevisiae using the genetic tug-of-war method
Koji Makanae, Reiko Kintaka, Takashi Makino, Hiroaki Kitano, Hisao Moriya
Genome Res. 2013 Feb; 23(2): 300–311. doi: 10.1101/gr.146662.112
PMCID:
PMC3561871
AbstractArticlePDF–2.3M

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