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Items: 1 to 20 of 24

1.
In vivo validation of late‐onset Alzheimer's disease genetic risk factors
Michael Sasner, Christoph Preuss, Ravi S. Pandey, Asli Uyar, Dylan Garceau, Kevin P. Kotredes, Harriet Williams, Adrian L. Oblak, Peter Bor‐Chian Lin, Bridget Perkins, Disha Soni, Cindy Ingraham, Audrey Lee‐Gosselin, Bruce T. Lamb, Gareth R. Howell, Gregory W. Carter
Alzheimers Dement. 2024 Jul; 20(7): 4970–4984. Published online 2024 Apr 30. doi: 10.1002/alz.13840
PMCID:
PMC11247676
AbstractArticlePDF–3.3M
2.
CREG1 promotes lysosomal biogenesis and function
Jie Liu, Yanmei Qi, Joshua Chao, Pranav Sathuvalli, Leonard Y. Lee, Shaohua Li
Autophagy. 2021; 17(12): 4249–4265. Published online 2021 May 8. doi: 10.1080/15548627.2021.1909997
PMCID:
PMC8726608
AbstractArticlePDF–9.2M
3.
Vacuolar-type proton ATPase is required for maintenance of apicobasal polarity of embryonic visceral endoderm
Ge-Hong Sun-Wada, Hiroyuki Tabata, Yoh Wada
Sci Rep. 2021; 11: 19355. Published online 2021 Sep 29. doi: 10.1038/s41598-021-98952-3
PMCID:
PMC8481250
AbstractArticlePDF–3.5M
4.
Rab7-Mediated Endocytosis Establishes Patterning of Wnt Activity through Inactivation of Dkk Antagonism
Nobuyuki Kawamura, Katsuyoshi Takaoka, Hiroshi Hamada, Anna-Katerina Hadjantonakis, Ge-Hong Sun-Wada, Yoh Wada
Cell Rep. Author manuscript; available in PMC 2021 Jun 2.
Published in final edited form as: Cell Rep. 2020 Jun 9; 31(10): 107733. doi: 10.1016/j.celrep.2020.107733
PMCID:
PMC8171381
AbstractArticlePDF–1.3M
5.
Structural insights into membrane remodeling by SNX1
Yan Zhang, Xiaoyun Pang, Jian Li, Jiashu Xu, Victor W. Hsu, Fei Sun
Proc Natl Acad Sci U S A. 2021 Mar 9; 118(10): e2022614118. Published online 2021 Mar 3. doi: 10.1073/pnas.2022614118
PMCID:
PMC7958236
AbstractArticlePDF–2.9M
6.
BraInMap elucidates the macromolecular connectivity landscape of mammalian brain
Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili
Cell Syst. Author manuscript; available in PMC 2021 Apr 22.
Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003
Correction in:
Cell Syst. 2020 Aug 26; 11(2): 208.
PMCID:
PMC7938770
AbstractArticlePDF–2.0M
7.
Sorting nexin 1 loss results in increased oxidative stress and hypertension
Jian Yang, Laureano D. Asico, Amber L. Beitelshees, Jun B. Feranil, Xiaoyan Wang, John E. Jones, Ines Armando, Santiago G. Cuevas, Gary L. Schwartz, John G. Gums, Arlene B. Chapman, Stephen T. Turner, Eric Boerwinkle, Rhonda M. Cooper-DeHoff, Julie A. Johnson, Robin A. Felder, Edward J. Weinman, Chunyu Zeng, Pedro A. Jose, Van Anthony M. Villar
FASEB J. Author manuscript; available in PMC 2020 Nov 5.
Published in final edited form as: FASEB J. 2020 Jun; 34(6): 7941–7957. Published online 2020 Apr 15. doi: 10.1096/fj.201902448R
PMCID:
PMC7643053
AbstractArticlePDF–1.0M
8.
BioID screening of biotinylation sites using the avidin-like protein Tamavidin 2-REV identifies global interactors of stimulator of interferon genes (STING)
Kou Motani, Hidetaka Kosako
J Biol Chem. 2020 Aug 7; 295(32): 11174–11183. Published online 2020 Jun 17. doi: 10.1074/jbc.RA120.014323
PMCID:
PMC7415991
AbstractArticlePDF–2.0M
9.
A Critical Role for Sorting Nexin 1 in the Trafficking of Metabotropic Glutamate Receptors
Rohan Sharma, Ravinder Gulia, Samarjit Bhattacharyya
J Neurosci. 2018 Oct 3; 38(40): 8605–8620. doi: 10.1523/JNEUROSCI.0454-18.2018
PMCID:
PMC6596224
AbstractArticlePDF–7.0M
10.
Fancd2 in vivo interaction network reveals a non-canonical role in mitochondrial function
Tingting Zhang, Wei Du, Andrew F. Wilson, Satoshi H. Namekawa, Paul R. Andreassen, Amom Ruhikanta Meetei, Qishen Pang
Sci Rep. 2017; 7: 45626. Published online 2017 Apr 5. doi: 10.1038/srep45626
PMCID:
PMC5381226
AbstractArticlePDF–1.4M
11.
Sorting Nexin 1 Loss Results in D5 Dopamine Receptor Dysfunction in Human Renal Proximal Tubule Cells and Hypertension in Mice
Van Anthony M. Villar, John Edward Jones, Ines Armando, Laureano D. Asico, Crisanto S. Escano, Jr., Hewang Lee, Xiaoyan Wang, Yu Yang, Annabelle M. Pascua-Crusan, Cynthia P. Palmes-Saloma, Robin A. Felder, Pedro A. Jose
J Biol Chem. 2013 Jan 4; 288(1): 152–163. Published online 2012 Nov 14. doi: 10.1074/jbc.M112.428458
PMCID:
PMC3537009
AbstractArticlePDF–2.8M
12.
SNX5 is essential for efficient macropinocytosis and antigen processing in primary macrophages
Jet Phey Lim, Rohan D. Teasdale, Paul A. Gleeson
Biol Open. 2012 Sep 15; 1(9): 904–914. Published online 2012 Jul 25. doi: 10.1242/bio.20122204
PMCID:
PMC3507233
AbstractArticlePDF–641K
13.
Mapping the Interactions between a RUN Domain from DENND5/Rab6IP1 and Sorting Nexin 1
Humberto Fernandes, Edward Franklin, Florence Jollivet, Katharina Bliedtner, Amir R. Khan
PLoS One. 2012; 7(4): e35637. Published online 2012 Apr 25. doi: 10.1371/journal.pone.0035637
PMCID:
PMC3338420
AbstractArticlePDF–1.2M
14.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
15.
A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo
Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio
PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582
PMCID:
PMC3022534
AbstractArticlePDF–3.8M
16.
Cargo-selective endosomal sorting for retrieval to the Golgi requires retromer
Matthew N.J. Seaman
J Cell Biol. 2004 Apr 12; 165(1): 111–122. doi: 10.1083/jcb.200312034
PMCID:
PMC2172078
AbstractArticlePDF–3.2M
17.
Genetic evidence for a mammalian retromer complex containing sorting nexins 1 and 2
Courtney T. Griffin, JoAnn Trejo, Terry Magnuson
Proc Natl Acad Sci U S A. 2005 Oct 18; 102(42): 15173–15177. Published online 2005 Oct 7. doi: 10.1073/pnas.0409558102
PMCID:
PMC1257690
AbstractArticlePDF–409K
18.
RLP, a novel Ras-like protein, is an immediate-early transforming growth factor-β (TGF-β) target gene that negatively regulates transcriptional activity induced by TGF-β
Ester Piek, Maarten van Dinther, W. Tony Parks, John M. Sallee, Erwin P. BöTTINGER, Anita B. Roberts, Peter ten DIJKE
Biochem J. 2004 Oct 1; 383(Pt 1): 187–199. Prepublished online 2004 Jul 8. Published online 2004 Sep 24. doi: 10.1042/BJ20040774
PMCID:
PMC1134058
AbstractArticlePDF–946K
19.
RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer
Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki
Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600
PMCID:
PMC310992
AbstractArticlePDF–3.4M
20.
Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes
Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki
Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100
PMCID:
PMC310980
AbstractArticlePDF–1.4M

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