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Items: 1 to 20 of 61

1.
Misregulation of cell cycle-dependent methylation of budding yeast CENP-A contributes to chromosomal instability
Prashant K. Mishra, Wei-Chun Au, Pedro G. Castineira, Nazrin Ali, John Stanton, Lars Boeckmann, Yoshimitsu Takahashi, Michael Costanzo, Charles Boone, Kerry S. Bloom, Peter H. Thorpe, Munira A. Basrai
Mol Biol Cell. 2023 Sep 1; 34(10): ar99. Published online 2023 Aug 17. doi: 10.1091/mbc.E23-03-0108
PMCID:
PMC10551700
AbstractArticlePDF–3.7M
2.
SWR1 chromatin remodeling complex prevents mitotic slippage during spindle position checkpoint arrest
Ayse Koca Caydasi, Anton Khmelinskii, Zoulfia Darieva, Bahtiyar Kurtulmus, Michael Knop, Gislene Pereira
Mol Biol Cell. 2023 Feb 1; 34(2): ar11. Published online 2023 Jan 13. doi: 10.1091/mbc.E20-03-0179
PMCID:
PMC9930528
AbstractArticlePDF–8.4M
3.
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources
Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry
Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224
PMCID:
PMC9209811
AbstractArticlePDF–818K
4.
A regulatory phosphorylation site on Mec1 controls chromatin occupancy of RNA polymerases during replication stress
Verena Hurst, Kiran Challa, Felix Jonas, Romain Forey, Ragna Sack, Jan Seebacher, Christoph D Schmid, Naama Barkai, Kenji Shimada, Susan M Gasser, Jérôme Poli
EMBO J. 2021 Nov 2; 40(21): e108439. Published online 2021 Sep 27. doi: 10.15252/embj.2021108439
PMCID:
PMC8561635
AbstractArticlePDF–6.1M
5.
Ancient balancing selection maintains incompatible versions of the galactose pathway in yeast
James Boocock, Meru J. Sadhu, Arun Durvasula, Joshua S. Bloom, Leonid Kruglyak
Science. Author manuscript; available in PMC 2021 Aug 25.
Published in final edited form as: Science. 2021 Jan 22; 371(6527): 415–419. doi: 10.1126/science.aba0542
PMCID:
PMC8384573
AbstractArticlePDF–796K
6.
A ncRNA Modulates Histone Modification and mRNA Induction in the Yeast GAL Gene Cluster
Jonathan Houseley, Liudmilla Rubbi, Michael Grunstein, David Tollervey, Maria Vogelauer
Mol Cell. Author manuscript; available in PMC 2021 Jun 3.
Published in final edited form as: Mol Cell. 2008 Dec 5; 32(5): 685–95. doi: 10.1016/j.molcel.2008.09.027
PMCID:
PMC7610895
AbstractArticlePDF–2.0M
7.
Rad5 dysregulation drives hyperactive recombination at replication forks resulting in cisplatin sensitivity and genome instability
Eric E Bryant, Ivana Šunjevarić, Luke Berchowitz, Rodney Rothstein, Robert J D Reid
Nucleic Acids Res. 2019 Sep 26; 47(17): 9144–9159. Published online 2019 Jul 27. doi: 10.1093/nar/gkz631
PMCID:
PMC6753471
AbstractArticlePDF–6.0M
8.
Live‐cell imaging reveals the interplay between transcription factors, nucleosomes, and bursting
Benjamin T Donovan, Anh Huynh, David A Ball, Heta P Patel, Michael G Poirier, Daniel R Larson, Matthew L Ferguson, Tineke L Lenstra
EMBO J. 2019 Jun 17; 38(12): e100809. Published online 2019 May 17. doi: 10.15252/embj.2018100809
PMCID:
PMC6576174
AbstractArticlePDF–2.1M
9.
A Genome-Wide Screen Reveals a Role for the HIR Histone Chaperone Complex in Preventing Mislocalization of Budding Yeast CENP-A
Sultan Ciftci-Yilmaz, Wei-Chun Au, Prashant K. Mishra, Jessica R. Eisenstatt, Joy Chang, Anthony R. Dawson, Iris Zhu, Mahfuzur Rahman, Sven Bilke, Michael Costanzo, Anastasia Baryshnikova, Chad L. Myers, Paul S. Meltzer, David Landsman, Richard E. Baker, Charles Boone, Munira A. Basrai
Genetics. 2018 Sep; 210(1): 203–218. Published online 2018 Jul 16. doi: 10.1534/genetics.118.301305
PMCID:
PMC6116949
AbstractArticlePDF–2.1M
10.
Quantitative imaging of chromatin decompaction in living cells
Elisa Dultz, Roberta Mancini, Guido Polles, Pascal Vallotton, Frank Alber, Karsten Weis
Mol Biol Cell. 2018 Jul 15; 29(14): 1763–1777. doi: 10.1091/mbc.E17-11-0648
Correction in:
Mol Biol Cell. 2019 Mar 15; 30(6): 808–809.
PMCID:
PMC6080713
AbstractArticlePDF–919K
11.
Interdependent action of KH domain proteins Krr1 and Dim2 drive the 40S platform assembly
Miriam Sturm, Jingdong Cheng, Jochen Baßler, Roland Beckmann, Ed Hurt
Nat Commun. 2017; 8: 2213. Published online 2017 Dec 20. doi: 10.1038/s41467-017-02199-4
PMCID:
PMC5738357
AbstractArticlePDF–3.1M
12.
A global interaction network maps a wiring diagram of cellular function
Michael Costanzo, Benjamin VanderSluis, Elizabeth N. Koch, Anastasia Baryshnikova, Carles Pons, Guihong Tan, Wen Wang, Matej Usaj, Julia Hanchard, Susan D. Lee, Vicent Pelechano, Erin B. Styles, Maximilian Billmann, Jolanda van Leeuwen, Nydia van Dyk, Zhen-Yuan Lin, Elena Kuzmin, Justin Nelson, Jeff S. Piotrowski, Tharan Srikumar, Sondra Bahr, Yiqun Chen, Raamesh Deshpande, Christoph F. Kurat, Sheena C. Li, Zhijian Li, Mojca Mattiazzi Usaj, Hiroki Okada, Natasha Pascoe, Bryan-Joseph San Luis, Sara Sharifpoor, Emira Shuteriqi, Scott W. Simpkins, Jamie Snider, Harsha Garadi Suresh, Yizhao Tan, Hongwei Zhu, Noel Malod-Dognin, Vuk Janjic, Natasa Przulj, Olga G. Troyanskaya, Igor Stagljar, Tian Xia, Yoshikazu Ohya, Anne-Claude Gingras, Brian Raught, Michael Boutros, Lars M. Steinmetz, Claire L. Moore, Adam P. Rosebrock, Amy A. Caudy, Chad L. Myers, Brenda Andrews, Charles Boone
Science. Author manuscript; available in PMC 2017 Oct 30.
Published in final edited form as: Science. 2016 Sep 23; 353(6306): aaf1420. doi: 10.1126/science.aaf1420
PMCID:
PMC5661885
AbstractArticlePDF–2.6M
13.
The Genetic Landscape of a Cell
Michael Costanzo, Anastasia Baryshnikova, Jeremy Bellay, Yungil Kim, Eric D. Spear, Carolyn S. Sevier, Huiming Ding, Judice L.Y. Koh, Kiana Toufighi, Sara Mostafavi, Jeany Prinz, Robert P. St. Onge, Benjamin VanderSluis, Taras Makhnevych, Franco J. Vizeacoumar, Solmaz Alizadeh, Sondra Bahr, Renee L. Brost, Yiqun Chen, Murat Cokol, Raamesh Deshpande, Zhijian Li, Zhen-Yuan Lin, Wendy Liang, Michaela Marback, Jadine Paw, Bryan-Joseph San Luis, Ermira Shuteriqi, Amy Hin Yan Tong, Nydia van Dyk, Iain M. Wallace, Joseph A. Whitney, Matthew T. Weirauch, Guoqing Zhong, Hongwei Zhu, Walid A. Houry, Michael Brudno, Sasan Ragibizadeh, Balázs Papp, Csaba Pál, Frederick P. Roth, Guri Giaever, Corey Nislow, Olga G. Troyanskaya, Howard Bussey, Gary D. Bader, Anne-Claude Gingras, Quaid D. Morris, Philip M. Kim, Chris A. Kaiser, Chad L. Myers, Brenda J. Andrews, Charles Boone
Science. Author manuscript; available in PMC 2017 Sep 15.
Published in final edited form as: Science. 2010 Jan 22; 327(5964): 425–431. doi: 10.1126/science.1180823
PMCID:
PMC5600254
AbstractArticlePDF–2.4M
14.
Epigenetic Transcriptional Memory of GAL Genes Depends on Growth in Glucose and the Tup1 Transcription Factor in Saccharomyces cerevisiae
Varun Sood, Ivelisse Cajigas, Agustina D’Urso, William H. Light, Jason H. Brickner
Genetics. 2017 Aug; 206(4): 1895–1907. Published online 2017 Jun 12. doi: 10.1534/genetics.117.201632
PMCID:
PMC5560796
AbstractArticlePDF–1.8M
15.
Tma108, a putative M1 aminopeptidase, is a specific nascent chain-associated protein in Saccharomyces cerevisiae
Thierry Delaveau, Dimitri Davoine, Ariane Jolly, Antoine Vallot, Jérôme O. Rouvière, Athenaïs Gerber, Sandra Brochet, Marion Plessis, Roxane Roquigny, Jawad Merhej, Thibaut Leger, Camille Garcia, Gaëlle Lelandais, Elodie Laine, Benoit Palancade, Frédéric Devaux, Mathilde Garcia
Nucleic Acids Res. 2016 Oct 14; 44(18): 8826–8841. Published online 2016 Aug 31. doi: 10.1093/nar/gkw732
PMCID:
PMC5062994
AbstractArticlePDF–3.3M
16.
Regulation of Antisense Transcription by NuA4 Histone Acetyltransferase and Other Chromatin Regulatory Factors
Bhawana Uprety, Amala Kaja, Jannatul Ferdoush, Rwik Sen, Sukesh R. Bhaumik
Mol Cell Biol. 2016 Mar 15; 36(6): 992–1006. Prepublished online 2016 Jan 11. Published online 2016 Mar 1. doi: 10.1128/MCB.00808-15
PMCID:
PMC4810466
AbstractArticlePDF–2.8M
17.
Polygenic evolution of a sugar specialization tradeoff in yeast
Jeremy I. Roop, Kyu Chul Chang, Rachel B. Brem
Nature. Author manuscript; available in PMC 2016 Aug 18.
Published in final edited form as: Nature. 2016 Feb 18; 530(7590): 336–339. Published online 2016 Feb 10. doi: 10.1038/nature16938
PMCID:
PMC4760848
AbstractArticlePDF–1.1M
18.
Global reorganization of budding yeast chromosome conformation in different physiological conditions
Elisa Dultz, Harianto Tjong, Elodie Weider, Mareike Herzog, Barry Young, Christiane Brune, Daniel Müllner, Christopher Loewen, Frank Alber, Karsten Weis
J Cell Biol. 2016 Feb 1; 212(3): 321–334. doi: 10.1083/jcb.201507069
PMCID:
PMC4748577
AbstractArticlePDF–2.2M
19.
Regulated Formation of LncRNA-DNA Hybrids Enables Faster Transcriptional Induction and Environmental Adaptation
Sara C. Cloutier, Siwen Wang, Wai Kit Ma, Nadra Al Husini, Zuzer Dhoondia, Athar Ansari, Pete E. Pascuzzi, Elizabeth J. Tran
Mol Cell. Author manuscript; available in PMC 2017 Feb 4.
Published in final edited form as: Mol Cell. 2016 Feb 4; 61(3): 393–404. Published online 2016 Jan 28. doi: 10.1016/j.molcel.2015.12.024
Correction in:
Mol Cell. 2016 Apr 7; 62(1): 148.
PMCID:
PMC4744127
AbstractArticlePDF–2.5M
20.
Cmr1/WDR76 defines a nuclear genotoxic stress body linking genome integrity and protein quality control
Irene Gallina, Camilla Colding, Peter Henriksen, Petra Beli, Kyosuke Nakamura, Judith Offman, David P. Mathiasen, Sonia Silva, Eva Hoffmann, Anja Groth, Chunaram Choudhary, Michael Lisby
Nat Commun. 2015 Mar 30; 6: 6533. Published online 2015 Mar 30. doi: 10.1038/ncomms7533
PMCID:
PMC4389229
AbstractArticlePDF–3.1M

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