PMC Links for GEO Profiles (Select 2100965) - PMC

Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili

Cell Syst. Author manuscript; available in PMC 2021 Apr 22.

Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003

Correction in:: Cell Syst. 2020 Aug 26; 11(2): 208.

PMCID:: PMC7938770

Abstract Article PDF–2.0M

Select item 74159915.

BioID screening of biotinylation sites using the avidin-like protein Tamavidin 2-REV identifies global interactors of stimulator of interferon genes (STING)

Kou Motani, Hidetaka Kosako

J Biol Chem. 2020 Aug 7; 295(32): 11174–11183. Published online 2020 Jun 17. doi: 10.1074/jbc.RA120.014323

PMCID:: PMC7415991

Abstract Article PDF–2.0M

Select item 44634736.

Kelch Repeat and BTB Domain Containing Protein 5 (Kbtbd5) Regulates Skeletal Muscle Myogenesis through the E2F1-DP1 Complex

Wuming Gong, Rachel M. Gohla, Kathy M. Bowlin, Naoko Koyano-Nakagawa, Daniel J. Garry, Xiaozhong Shi

J Biol Chem. 2015 Jun 12; 290(24): 15350–15361. Published online 2015 May 4. doi: 10.1074/jbc.M114.629956

PMCID:: PMC4463473

Abstract Article PDF–2.4M

Select item 43195597.

A high resolution spatiotemporal atlas of gene expression of the developing mouse brain

Carol L. Thompson, Lydia Ng, Vilas Menon, Salvador Martinez, Chang-Kyu Lee, Katie Glattfelder, Susan M. Sunkin, Alex Henry, Christopher Lau, Chinh Dang, Raquel Garcia-Lopez, Almudena Martinez-Ferre, Ana Pombero, John L.R. Rubenstein, Wayne B. Wakeman, John Hohmann, Nick Dee, Andrew J. Sodt, Rob Young, Kimberly Smith, Thuc-Nghi Nguyen, Jolene Kidney, Leonard Kuan, Andreas Jeromin, Ajamete Kaykas, Jeremy Miller, Damon Page, Geri Orta, Amy Bernard, Zackery Riley, Simon Smith, Paul Wohnoutka, Mike Hawrylycz, Luis Puelles, Allan R. Jones

Neuron. Author manuscript; available in PMC 2015 Jul 16.

Published in final edited form as: Neuron. 2014 Jul 16; 83(2): 309–323. Published online 2014 Jun 19. doi: 10.1016/j.neuron.2014.05.033

PMCID:: PMC4319559

Abstract Article PDF–3.0M

Select item 42315368.

Radial glia require PDGFD/PDGFRß signaling in human but not mouse neocortex

Jan H. Lui, Tomasz J. Nowakowski, Alex A. Pollen, Ashkan Javaherian, Arnold R. Kriegstein, Michael C. Oldham

Nature. Author manuscript; available in PMC 2015 May 13.

Published in final edited form as: Nature. 2014 Nov 13; 515(7526): 264–268. doi: 10.1038/nature13973

PMCID:: PMC4231536

Abstract Article PDF–11M

Select item 41664979.

Identification of Novel Amplification Gene Targets in Mouse and Human Breast Cancer at a Syntenic Cluster Mapping to Mouse Identification of Novel Amplification Gene Targets in Mouse and Human Breast Cancer at a Syntenic Cluster Mapping to Mouse ch8A1 and Human ch13q34

Martin C. Abba, Victoria T. Fabris, Yuhui Hu, Frances S. Kittrell, Wei-Wen Cai, Lawrence A. Donehower, Aysegul Sahin, Daniel Medina, C. Marcelo Aldaz

Cancer Res. Author manuscript; available in PMC 2014 Sep 17.

Published in final edited form as: Cancer Res. 2007 May 1; 67(9): 4104–4112. doi: 10.1158/0008-5472.CAN-06-4672

PMCID:: PMC4166497

Abstract Article PDF–485K

Select item 364745610.

The Polycomb Group Protein L3mbtl2 Assembles an Atypical PRC1-Family Complex that Is Essential in Pluripotent Stem Cells and Early Development

Jinzhong Qin, Warren A. Whyte, Endre Anderssen, Effie Apostolou, Hsu-Hsin Chen, Schahram Akbarian, Roderick T. Bronson, Konrad Hochedlinger, Sridhar Ramaswamy, Richard A. Young, Hanno Hock

Cell Stem Cell. Author manuscript; available in PMC 2013 May 8.

Published in final edited form as: Cell Stem Cell. 2012 Sep 7; 11(3): 319–332. Published online 2012 Jul 5. doi: 10.1016/j.stem.2012.06.002

PMCID:: PMC3647456

Abstract Article PDF–5.1M

Select item 343984511.

A Genome-Wide Screen to Identify Transcription Factors Expressed in Pelvic Ganglia of the Lower Urinary Tract

Carrie B. Wiese, Sara Ireland, Nicole L. Fleming, Jing Yu, M. Todd Valerius, Kylie Georgas, Han Sheng Chiu, Jane Brennan, Jane Armstrong, Melissa H. Little, Andrew P. McMahon, E. Michelle Southard-Smith

Front Neurosci. 2012; 6: 130. Published online 2012 Sep 12. doi: 10.3389/fnins.2012.00130

PMCID:: PMC3439845

Abstract Article PDF–1.4M

Select item 341992412.

Dual functions of DP1 promote biphasic Wnt-on and Wnt-off states during anteroposterior neural patterning

Wan-tae Kim, Hyunjoon Kim, Vladimir L Katanaev, Seung Joon Lee, Tohru Ishitani, Boksik Cha, Jin-Kwan Han, Eek-hoon Jho

EMBO J. 2012 Aug 15; 31(16): 3384–3397. Published online 2012 Jul 6. doi: 10.1038/emboj.2012.181

PMCID:: PMC3419924

Abstract Article PDF–2.4M

Select item 335650513.

Congenital Asplenia in Mice and Humans with Mutations in a Pbx/Nkx2-5/p15 Module

Matthew Koss, Alexandre Bolze, Andrea Brendolan, Matilde Saggese, Terence D. Capellini, Ekaterina Bojilova, Bertrand Boisson, Owen W.J. Prall, David Elliott, Mark Solloway, Elisa Lenti, Chisa Hidaka, Ching-Pin Chang, Nizar Mahlaoui, Richard P. Harvey, Jean-Laurent Casanova, Licia Selleri

Dev Cell. Author manuscript; available in PMC 2013 May 15.

Published in final edited form as: Dev Cell. 2012 May 15; 22(5): 913–926. Published online 2012 May 3. doi: 10.1016/j.devcel.2012.02.009

PMCID:: PMC3356505

Abstract Article PDF–6.8M

Select item 328717514.

The CHR promoter element controls cell cycle-dependent gene transcription and binds the DREAM and MMB complexes

Gerd A. Müller, Marianne Quaas, Michael Schümann, Eberhard Krause, Megha Padi, Martin Fischer, Larisa Litovchick, James A. DeCaprio, Kurt Engeland

Nucleic Acids Res. 2012 Feb; 40(4): 1561–1578. Published online 2011 Nov 7. doi: 10.1093/nar/gkr793

PMCID:: PMC3287175

Abstract Article PDF–1.5M

Select item 318949215.

Three-dimensional visualisation of testis cord morphogenesis, a novel tubulogenic mechanism in development

Alexander N. Combes, Emmanuelle Lesieur, Vincent R. Harley, Andrew H. Sinclair, Melissa H. Little, Dagmar Wilhelm, Peter Koopman

Dev Dyn. Author manuscript; available in PMC 2011 Oct 9.

Published in final edited form as: Dev Dyn. 2009 May; 238(5): 1033–1041. doi: 10.1002/dvdy.21925

PMCID:: PMC3189492

Abstract Article PDF–2.5M

Select item 317805916.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 311015117.

A Systems Approach Reveals that the Myogenesis Genome Network Is Regulated by the Transcriptional Repressor RP58

Shigetoshi Yokoyama, Yoshiaki Ito, Hiroe Ueno-Kudoh, Hirohito Shimizu, Kenta Uchibe, Sonia Albini, Kazuhiko Mitsuoka, Shigeru Miyaki, Minako Kiso, Akane Nagai, Tomohiro Hikata, Tadahiro Osada, Noritsugu Fukuda, Satoshi Yamashita, Daisuke Harada, Valeria Mezzano, Masataka Kasai, Pier Lorenzo Puri, Yoshihide Hayashizaki, Haruo Okado, Megumi Hashimoto, Hiroshi Asahara

Dev Cell. Author manuscript; available in PMC 2011 Jun 7.

Published in final edited form as: Dev Cell. 2009 Dec; 17(6): 836–848. doi: 10.1016/j.devcel.2009.10.011

PMCID:: PMC3110151

Abstract Article PDF–2.0M

Select item 309399318.

Csf2 Null Mutation Alters Placental Gene Expression and Trophoblast Glycogen Cell and Giant Cell Abundance in Mice

Amanda N. Sferruzzi-Perri, Anne M. Macpherson, Claire T. Roberts, Sarah A. Robertson

Biol Reprod. 2009 Jul; 81(1): 207–221. Published online 2009 Feb 18. doi: 10.1095/biolreprod.108.073312

PMCID:: PMC3093993

Abstract Article PDF–4.5M

Select item 302253419.

A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo

Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio

PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582

PMCID:: PMC3022534

Abstract Article PDF–3.8M

Select item 286358720.

Repression of Transcriptional Activity of C/EBPα by E2F-Dimerization Partner Complexes

Katrin Zaragoza, Valérie Bégay, Anja Schuetz, Udo Heinemann, Achim Leutz

Mol Cell Biol. 2010 May; 30(9): 2293–2304. Published online 2010 Feb 22. doi: 10.1128/MCB.01619-09

PMCID:: PMC2863587

Abstract Article PDF–3.0M

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