PMC Links for GEO Profiles (Select 21085688) - PMC - NCBI

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Items: 16

Select item 26146991.

Small membrane proteins found by comparative genomics and ribosome binding site models

Matthew R. Hemm, Brian J. Paul, Thomas D. Schneider, Gisela Storz, Kenneth E. Rudd

Mol Microbiol. Author manuscript; available in PMC 2009 Jan 7.

Published in final edited form as: Mol Microbiol. 2008 Dec; 70(6): 1487–1501. doi: 10.1111/j.1365-2958.2008.06495.x

PMCID:: PMC2614699

Article PDF–1.1M

Select item 19248872.

RNA-based regulation of genes of tryptophan synthesis and degradation, in bacteria

Charles Yanofsky

RNA. 2007 Aug; 13(8): 1141–1154. doi: 10.1261/rna.620507

PMCID:: PMC1924887

Article PDF–1.5M

Select item 17973093.

Genome-Wide Screening of Genes Required for Swarming Motility in Escherichia coli K-12

Tetsuyoshi Inoue, Ryuji Shingaki, Shotaro Hirose, Kaori Waki, Hirotada Mori, Kazuhiro Fukui

J Bacteriol. 2007 Feb; 189(3): 950–957. Published online 2006 Nov 22. doi: 10.1128/JB.01294-06

PMCID:: PMC1797309

Article PDF–141K

Select item 16814814.

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110

Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi

Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049

PMCID:: PMC1681481

Article PDF–141K

Select item 15787585.

Multiple feedback loop design in the tryptophan regulatory network of Escherichia coli suggests a paradigm for robust regulation of processes in series

Sharad Bhartiya, Nikhil Chaudhary, K.V Venkatesh, Francis J Doyle, III

J R Soc Interface. 2006 Jun 22; 3(8): 383–391. Published online 2005 Nov 29. doi: 10.1098/rsif.2005.0103

PMCID:: PMC1578758

Article PDF–320K

Select item 13252006.

Escherichia coli K-12: a cooperatively developed annotation snapshot—2005

Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner

Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405

PMCID:: PMC1325200

Article PDF–204K

Select item 11835087.

What Makes Ribosome-Mediated Transcriptional Attenuation Sensitive to Amino Acid Limitation?

Johan Elf, Måns Ehrenberg

PLoS Comput Biol. 2005 Jun; 1(1): e2. Published online 2005 Jun 24. doi: 10.1371/journal.pcbi.0010002

PMCID:: PMC1183508

Article PDF–341K

Select item 4116818.

Attenuation in the Escherichia coli tryptophan operon: role of RNA secondary structure involving the tryptophan codon region.

D L Oxender, G Zurawski, C Yanofsky

Proc Natl Acad Sci U S A. 1979 Nov; 76(11): 5524–5528. doi: 10.1073/pnas.76.11.5524

PMCID:: PMC411681

Article PDF–1.3M

Select item 3931029.

Translational control of transcription termination at the attenuator of the Escherichia coli tryptophan operon.

G Zurawski, D Elseviers, G V Stauffer, C Yanofsky

Proc Natl Acad Sci U S A. 1978 Dec; 75(12): 5988–5992. doi: 10.1073/pnas.75.12.5988

PMCID:: PMC393102

Article PDF–1.3M

Select item 39044610.

Translation activates the paused transcription complex and restores transcription of the trp operon leader region.

R Landick, J Carey, C Yanofsky

Proc Natl Acad Sci U S A. 1985 Jul; 82(14): 4663–4667. doi: 10.1073/pnas.82.14.4663

PMCID:: PMC390446

Article PDF–1.3M

Select item 34588611.

Effects of DNA base analogs on transcription termination at the tryptophan operon attenuator of Escherichia coli

Peggy J. Farnham, Terry Platt

Proc Natl Acad Sci U S A. 1982 Feb; 79(4): 998–1002. doi: 10.1073/pnas.79.4.998

PMCID:: PMC345886

Article PDF–1.1M

Select item 34277612.

The attenuator of the tryptophan operon in E.coli: rho-mediated release of RNA polymerase from a transcription termination complex in vitro.

R S Fuller, T Platt

Nucleic Acids Res. 1978 Dec; 5(12): 4613–4623.

PMCID:: PMC342776

Article PDF–1.1M

Select item 33621513.

Single base-pair alterations in the Escherichia coli trp operon leader region that relieve transcription termination at the trp attenuator.

G V Stauffer, G Zurawski, C Yanofsky

Proc Natl Acad Sci U S A. 1978 Oct; 75(10): 4833–4837. doi: 10.1073/pnas.75.10.4833

PMCID:: PMC336215

Article PDF–952K

Select item 32763214.

The complete nucleotide sequence of the tryptophan operon of Escherichia coli.

C Yanofsky, T Platt, I P Crawford, B P Nichols, G E Christie, H Horowitz, M VanCleemput, A M Wu

Nucleic Acids Res. 1981 Dec 21; 9(24): 6647–6668. doi: 10.1093/nar/9.24.6647

PMCID:: PMC327632

Article PDF–1.7M

Select item 19696515.

Role of regulatory features of the trp operon of Escherichia coli in mediating a response to a nutritional shift.

C Yanofsky, V Horn

J Bacteriol. 1994 Oct; 176(20): 6245–6254. doi: 10.1128/jb.176.20.6245-6254.1994

PMCID:: PMC196965

Article PDF–2.2M

Select item 9423216.

Transcription Attenuation: Once Viewed as a Novel Regulatory Strategy

Charles Yanofsky

J Bacteriol. 2000 Jan; 182(1): 1–8. doi: 10.1128/jb.182.1.1-8.2000

PMCID:: PMC94232

Article PDF–121K

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