PMC Links for GEO Profiles (Select 21477421) - PMC

Om Singh Rathore, Rui D. Silva, Mariana Ascensão-Ferreira, Ricardo Matos, Célia Carvalho, Bruno Marques, Margarida N. Tiago, Pedro Prudêncio, Raquel P. Andrade, Jean-Yves Roignant, Nuno L. Barbosa-Morais, Rui Gonçalo Martinho

RNA. 2020 Dec; 26(12): 1935–1956. doi: 10.1261/rna.077446.120

Correction in:: RNA. 2024 Jan; 30(1): 99.

PMCID:: PMC7668242

Abstract Article PDF–6.3M

Select item 69615784.

CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans

Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang

Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119

PMCID:: PMC6961578

Abstract Article PDF–3.6M

Select item 66149145.

Molecular determinants of metazoan tricRNA biogenesis

Casey A Schmidt, Joseph D Giusto, Alicia Bao, Anita K Hopper, A Gregory Matera

Nucleic Acids Res. 2019 Jul 9; 47(12): 6452–6465. Published online 2019 Apr 29. doi: 10.1093/nar/gkz311

PMCID:: PMC6614914

Abstract Article PDF–6.3M

Select item 65306426.

Drosophila CrebB is a Substrate of the Nonsense-Mediated mRNA Decay Pathway that Sustains Circadian Behaviors

Hwajung Ri, Jongbin Lee, Jun Young Sonn, Eunseok Yoo, Chunghun Lim, Joonho Choe

Mol Cells. 2019 Apr; 42(4): 301–312. Published online 2019 Feb 20. doi: 10.14348/molcells.2019.2451

PMCID:: PMC6530642

Abstract Article PDF–2.6M

Select item 60632307.

Multiple Nonsense-Mediated mRNA Processes Require Smg5 in Drosophila

Jonathan O. Nelson, Dominique Förster, Kimberly A. Frizzell, Stefan Luschnig, Mark M. Metzstein

Genetics. 2018 Aug; 209(4): 1073–1084. Published online 2018 Jun 13. doi: 10.1534/genetics.118.301140

PMCID:: PMC6063230

Abstract Article PDF–1.2M

Select item 57078058.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 56890029.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 488965810.

mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster

Gildas Lepennetier, Francesco Catania

G3 (Bethesda) 2016 Jun; 6(6): 1617–1626. Published online 2016 Mar 28. doi: 10.1534/g3.116.029231

PMCID:: PMC4889658

Abstract Article PDF–1.5M

Select item 469182811.

Suppressor of sable [Su(s)] and Wdr82 down-regulate RNA from heat-shock-inducible repetitive elements by a mechanism that involves transcription termination

Paul Brewer-Jensen, Carrie B. Wilson, John Abernethy, Lonna Mollison, Samantha Card, Lillie L. Searles

RNA. 2016 Jan; 22(1): 139–154. doi: 10.1261/rna.048819.114

PMCID:: PMC4691828

Abstract Article PDF–586K

Select item 452833012.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 452832913.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

Select item 435288714.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114