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Items: 1 to 20 of 22

1.
Genetic determinants of micronucleus formation in vivo
D. J. Adams, B. Barlas, R. E. McIntyre, I. Salguero, L. van der Weyden, A. Barros, J. R. Vicente, N. Karimpour, A. Haider, M. Ranzani, G. Turner, N. A. Thompson, V. Harle, R. Olvera-León, C. D. Robles-Espinoza, A. O. Speak, N. Geisler, W. J. Weninger, S. H. Geyer, J. Hewinson, N. A. Karp, The Sanger Mouse Genetics Project, B. Fu, F. Yang, Z. Kozik, J. Choudhary, L. Yu, M. S. van Ruiten, B. D. Rowland, C. J. Lelliott, M. del Castillo Velasco-Herrera, R. Verstraten, L. Bruckner, A. G. Henssen, M. A. Rooimans, J. de Lange, T. J. Mohun, M. J. Arends, K. A. Kentistou, P. A. Coelho, Y. Zhao, H. Zecchini, J. R. B. Perry, S. P. Jackson, G. Balmus
Nature. 2024; 627(8002): 130–136. Published online 2024 Feb 14. doi: 10.1038/s41586-023-07009-0
PMCID:
PMC10917660
AbstractArticlePDF–4.8M
2.
An essential function for autocrine hedgehog signaling in epithelial proliferation and differentiation in the trachea
Wenguang Yin, Andreas Liontos, Janine Koepke, Maroua Ghoul, Luciana Mazzocchi, Xinyuan Liu, Chunyan Lu, Haoyu Wu, Athanasios Fysikopoulos, Alexandros Sountoulidis, Werner Seeger, Clemens Ruppert, Andreas Günther, Didier Y. R. Stainier, Christos Samakovlis
Development. 2022 Feb 1; 149(3): dev199804. Published online 2022 Feb 7. doi: 10.1242/dev.199804
PMCID:
PMC8918789
AbstractArticle
3.
Spatiotemporal Expression of Three Secretoglobin Proteins, SCGB1A1, SCGB3A1, and SCGB3A2, in Mouse Airway Epithelia
Xu Naizhen, Taketomo Kido, Shigetoshi Yokoyama, R. Ilona Linnoila, Shioko Kimura
J Histochem Cytochem. 2019 Jun; 67(6): 453–463. Published online 2019 Feb 15. doi: 10.1369/0022155419829050
PMCID:
PMC6542149
AbstractArticlePDF–1.3M
4.
Neonatal Hyperoxic Exposure Persistently Alters Lung Secretoglobins and Annexin A1
Thomas M. Raffay, Morgan L. Locy, Cynthia L. Hill, Nik S. Jindal, Lynette K. Rogers, Stephen E. Welty, Trent E. Tipple
Biomed Res Int. 2013; 2013: 408485. Published online 2013 Sep 26. doi: 10.1155/2013/408485
PMCID:
PMC3804154
AbstractArticlePDF–1.7M
5.
RNAi Screen Reveals Potentially Novel Roles of Cytokines in Myoblast Differentiation
Yejing Ge, Rachel J. Waldemer, Ramakrishna Nalluri, Paul D. Nuzzi, Jie Chen
PLoS One. 2013; 8(7): e68068. Published online 2013 Jul 2. doi: 10.1371/journal.pone.0068068
PMCID:
PMC3699544
AbstractArticlePDF–1.5M
6.
A conditional knockout resource for the genome–wide study of mouse gene function
William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley
Nature. Author manuscript; available in PMC 2013 Feb 14.
Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163
PMCID:
PMC3572410
AbstractArticlePDF–1.1M
7.
In Utero Exposure to Arsenic Alters Lung Development and Genes Related to Immune and Mucociliary Function in Mice
Kathryn A. Ramsey, Anthony Bosco, Katherine L. McKenna, Kim W. Carter, John G. Elliot, Luke J. Berry, Peter D. Sly, Alexander N. Larcombe, Graeme R. Zosky
Environ Health Perspect. 2013 Feb; 121(2): 244–250. Published online 2012 Dec 4. doi: 10.1289/ehp.1205590
PMCID:
PMC3569690
AbstractArticlePDF–946K
8.
The Transcription Factors Grainyhead-like 2 and NK2-Homeobox 1 Form a Regulatory Loop That Coordinates Lung Epithelial Cell Morphogenesis and Differentiation
Saaket Varma, Yuxia Cao, Jean-Bosco Tagne, Meenakshi Lakshminarayanan, Jun Li, Thomas B. Friedman, Robert J. Morell, David Warburton, Darrell N. Kotton, Maria I. Ramirez
J Biol Chem. 2012 Oct 26; 287(44): 37282–37295. Published online 2012 Sep 6. doi: 10.1074/jbc.M112.408401
PMCID:
PMC3481326
AbstractArticlePDF–4.4M
9.
Thyroid Hormone Receptor Repression Linked to Type I Pneumocyte Associated Respiratory Distress Syndrome
Liming Pei, Mathias Leblanc, Grant Barish, Annette Atkins, Russell Nofsinger, Jamie Whyte, David Gold, Mingxiao He, Kazuko Kawamura, Hai-Ri Li, Michael Downes, Ruth T. Yu, Harry Powell, Jerry B. Lingrel, Ronald M. Evans
Nat Med. Author manuscript; available in PMC 2012 Apr 16.
Published in final edited form as: Nat Med. 2011; 17(11): 1466–1472. Published online 2011 Oct 16. doi: 10.1038/nm.2450
PMCID:
PMC3210920
AbstractArticlePDF–2.5M
10.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
11.
Site-specific Differences in Gene Expression of Secreted Proteins in the Mouse Lung: Comparison of Methods to Show Differences by Location
Katherine M. Sutherland, Trenton J. Combs, Patricia C. Edwards, Laura S. Van Winkle
J Histochem Cytochem. 2010 Dec; 58(12): 1107–1119. doi: 10.1369/jhc.2010.956052
PMCID:
PMC2989247
AbstractArticlePDF–1.9M
12.
IFN-γ down-regulates Secretoglobin 3A1 gene expression
Atsushi Yamada, Dai Suzuki, Agasa Miyazono, Kumiko Oshima, Akihide Kamiya, Baohong Zhao, Masamichi Takami, Raymond P. Donnelly, Hiroyuki Itabe, Matsuo Yamamoto, Shioko Kimura, Ryutaro Kamijo
Biochem Biophys Res Commun. Author manuscript; available in PMC 2010 Feb 20.
Published in final edited form as: Biochem Biophys Res Commun. 2009 Feb 20; 379(4): 964–968. Published online 2009 Jan 9. doi: 10.1016/j.bbrc.2008.12.187
PMCID:
PMC2792195
AbstractArticlePDF–1018K
13.
Oncostatin M Regulates Secretoglobin 3A1 and 3A2 Expression in a Bidirectional Manner
Takeshi Tomita, Atsushi Yamada, Masaaki Miyakoshi, Taketomo Kido, Faruk Sheikh, Achara Srisodsai, Atsushi Miyajima, Raymond P. Donnelly, Shioko Kimura
Am J Respir Cell Mol Biol. 2009 May; 40(5): 620–630. Published online 2008 Oct 31. doi: 10.1165/rcmb.2008-0062OC
PMCID:
PMC2677441
AbstractArticlePDF–1.0M
14.
Regulation of mouse Scgb3a1 gene expression by NF-Y and association of CpG methylation with its tissue-specific expression
Takeshi Tomita, Shioko Kimura
BMC Mol Biol. 2008; 9: 5. Published online 2008 Jan 14. doi: 10.1186/1471-2199-9-5
PMCID:
PMC2266941
AbstractArticlePDF–1.0M
15.
Murine candidate bleomycin induced pulmonary fibrosis susceptibility genes identified by gene expression and sequence analysis of linkage regions
C Haston, T Tomko, N Godin, L Kerckhoff, M Hallett
J Med Genet. 2005 Jun; 42(6): 464–473. doi: 10.1136/jmg.2004.027938
PMCID:
PMC1736068
SummaryPDF–201K
16.
Induction of Uteroglobin-Related Protein 2 (Ugrp2) Gene Expression by the Th2 Cytokines IL-4 and IL-13
Atsushi Yamada, Faruk Sheikh, Tomoaki Niimi, Francesco J. DeMayo, Achsah D. Keegan, Raymond P. Donnelly, Shioko Kimura
J Immunol. Author manuscript; available in PMC 2006 Feb 13.
Published in final edited form as: J Immunol. 2005 Nov 1; 175(9): 5708–5715. doi: 10.4049/jimmunol.175.9.5708
PMCID:
PMC1364478
AbstractArticlePDF–801K
17.
Induction of uteroglobin-related protein 2 (Ugrp2) expression by EGF and TGFα
Atsushi Yamada, Shioko Kimura
FEBS Lett. Author manuscript; available in PMC 2006 Jan 20.
Published in final edited form as: FEBS Lett. 2005 Apr 11; 579(10): 2221–2225. doi: 10.1016/j.febslet.2005.03.017
PMCID:
PMC1343457
AbstractArticlePDF–152K
18.
RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer
Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki
Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600
PMCID:
PMC310992
AbstractArticlePDF–3.4M
19.
Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes
Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki
Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100
PMCID:
PMC310980
AbstractArticlePDF–1.4M
20.
Wnk1 kinase deficiency lowers blood pressure in mice: A gene-trap screen to identify potential targets for therapeutic intervention
Brian P. Zambrowicz, Alejandro Abuin, Ramiro Ramirez-Solis, Lizabeth J. Richter, James Piggott, Hector BeltrandelRio, Eric C. Buxton, Joel Edwards, Rick A. Finch, Carl J. Friddle, Anupma Gupta, Gwenn Hansen, Yi Hu, Wenhu Huang, Crystal Jaing, Billie Wayne Key, Jr., Peter Kipp, Buckley Kohlhauff, Zhi-Qing Ma, Diane Markesich, Robert Payne, David G. Potter, Ny Qian, Joseph Shaw, Jeff Schrick, Zheng-Zheng Shi, Mary Jean Sparks, Isaac Van Sligtenhorst, Peter Vogel, Wade Walke, Nianhua Xu, Qichao Zhu, Christophe Person, Arthur T. Sands
Proc Natl Acad Sci U S A. 2003 Nov 25; 100(24): 14109–14114. Published online 2003 Nov 10. doi: 10.1073/pnas.2336103100
Correction in:
Proc Natl Acad Sci U S A. 2004 Mar 23; 101(12): 4332.
PMCID:
PMC283554
AbstractArticlePDF–481K

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