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Select item 79387701.

BraInMap elucidates the macromolecular connectivity landscape of mammalian brain

Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili

Cell Syst. Author manuscript; available in PMC 2021 Apr 22.

Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003

Correction in:: Cell Syst. 2020 Aug 26; 11(2): 208.

PMCID:: PMC7938770

Abstract Article PDF–2.0M

Select item 74159912.

BioID screening of biotinylation sites using the avidin-like protein Tamavidin 2-REV identifies global interactors of stimulator of interferon genes (STING)

Kou Motani, Hidetaka Kosako

J Biol Chem. 2020 Aug 7; 295(32): 11174–11183. Published online 2020 Jun 17. doi: 10.1074/jbc.RA120.014323

PMCID:: PMC7415991

Abstract Article PDF–2.0M

Select item 56560053.

Csk-associated adaptor PAG inhibits effector T cell activation in cooperation with phosphatase PTPN22 and Dok adaptors

Dominique Davidson, Ming-Chao Zhong, Pier Paolo Pandolfi, Silvia Bolland, Ramnik J. Xavier, Brian Seed, Xin Li, Hua Gu, André Veillette

Cell Rep. Author manuscript; available in PMC 2017 Dec 6.

Published in final edited form as: Cell Rep. 2016 Dec 6; 17(10): 2776–2788. doi: 10.1016/j.celrep.2016.11.035

PMCID:: PMC5656005

Abstract Article PDF–2.4M

Select item 47155604.

Differential expression of HDAC and HAT genes in atrophying skeletal muscle

Adam W. Beharry, Andrew R. Judge

Muscle Nerve. Author manuscript; available in PMC 2016 Dec 1.

Published in final edited form as: Muscle Nerve. 2015 Dec; 52(6): 1098–1101. Published online 2015 Oct 10. doi: 10.1002/mus.24912

PMCID:: PMC4715560

Abstract Article PDF–242K

Select item 46180865.

The Interleukin-2-mTORc1 Axis Defines the Reciprocal Signaling, Differentiation, and Metabolism of T Helper 1 and Follicular B Helper T Cells

John P. Ray, Matthew M. Staron, Justin A. Shyer, Ping-Chih Ho, Heather D. Marshall, Simon M. Gray, Brian J. Laidlaw, Koichi Araki, Rafi Ahmed, Susan M. Kaech, Joe Craft

Immunity. Author manuscript; available in PMC 2016 Oct 20.

Published in final edited form as: Immunity. 2015 Oct 20; 43(4): 690–702. Published online 2015 Sep 22. doi: 10.1016/j.immuni.2015.08.017

PMCID:: PMC4618086

Abstract Article PDF–2.2M

Select item 42487536.

Transmembrane Adaptor Protein PAG/CBP Is Involved in both Positive and Negative Regulation of Mast Cell Signaling

Lubica Draberova, Viktor Bugajev, Lucie Potuckova, Ivana Halova, Monika Bambouskova, Iva Polakovicova, Ramnik J. Xavier, Brian Seed, Petr Draber

Mol Cell Biol. 2014 Dec; 34(23): 4285–4300. doi: 10.1128/MCB.00983-14

PMCID:: PMC4248753

Abstract Article PDF–2.4M

Select item 39681437.

Roles of Raft-Anchored Adaptor Cbp/PAG1 in Spatial Regulation of c-Src Kinase

Takashi Saitou, Kentaro Kajiwara, Chitose Oneyama, Takashi Suzuki, Masato Okada

PLoS One. 2014; 9(3): e93470. Published online 2014 Mar 27. doi: 10.1371/journal.pone.0093470

PMCID:: PMC3968143

Abstract Article PDF–1.3M

Select item 35724108.

A conditional knockout resource for the genome–wide study of mouse gene function

William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley

Nature. Author manuscript; available in PMC 2013 Feb 14.

Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163

PMCID:: PMC3572410

Abstract Article PDF–1.1M

Select item 32330289.

The Transcriptional Coactivator Cbp Regulates Self-Renewal and Differentiation in Adult Hematopoietic Stem Cells

Wai-In Chan, Rebecca L. Hannah, Mark A. Dawson, Clare Pridans, Donna Foster, Anagha Joshi, Berthold Göttgens, Jan M. Van Deursen, Brian J. P. Huntly

Mol Cell Biol. 2011 Dec; 31(24): 5046–5060. doi: 10.1128/MCB.05830-11

PMCID:: PMC3233028

Abstract Article PDF–3.6M

Select item 317805910.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 316782011.

Phosphoprotein Associated with Glycosphingolipid-Enriched Microdomains Differentially Modulates Src Kinase Activity in Brain Maturation

Sabine Lindquist, Diana Karitkina, Kristina Langnaese, Anita Posevitz-Fejfar, Burkhart Schraven, Ramnik Xavier, Brian Seed, Jonathan A. Lindquist

PLoS One. 2011; 6(9): e23978. Published online 2011 Sep 6. doi: 10.1371/journal.pone.0023978

PMCID:: PMC3167820

Abstract Article PDF–2.0M

Select item 309117812.

Down-regulation of the Tumor Suppressor C-terminal Src Kinase (Csk)-binding Protein (Cbp)/PAG1 Is Mediated by Epigenetic Histone Modifications via the Mitogen-activated Protein Kinase (MAPK)/Phosphatidylinositol 3-Kinase (PI3K) Pathway

Kei Suzuki, Chitose Oneyama, Hironobu Kimura, Shoji Tajima, Masato Okada

J Biol Chem. 2011 May 6; 286(18): 15698–15706. Published online 2011 Mar 9. doi: 10.1074/jbc.M110.195362

PMCID:: PMC3091178

Abstract Article PDF–1.6M

Select item 309100213.

MAP3K4/CBP Regulated H2B Acetylation Controls Epithelial-Mesenchymal Transition in Trophoblast Stem Cells

Amy N. Abell, Nicole Vincent Jordan, Weichun Huang, Aleix Prat, Alicia A. Midland, Nancy L. Johnson, Deborah A. Granger, Piotr A. Mieczkowski, Charles M. Perou, Shawn M. Gomez, Leping Li, Gary L. Johnson

Cell Stem Cell. Author manuscript; available in PMC 2012 May 6.

Published in final edited form as: Cell Stem Cell. 2011 May 6; 8(5): 525–537. doi: 10.1016/j.stem.2011.03.008

PMCID:: PMC3091002

Abstract Article PDF–3.3M

Select item 302253414.

A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo

Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio

PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582

PMCID:: PMC3022534

Abstract Article PDF–3.8M

Select item 277319515.

The transmembrane protein CBP plays a role in transiently anchoring small clusters of Thy-1, a GPI-anchored protein, to the cytoskeleton

Yun Chen, Laurence Veracini, Christine Benistant, Ken Jacobson

J Cell Sci. 2009 Nov 1; 122(21): 3966–3972. Published online 2009 Oct 13. doi: 10.1242/jcs.049346

PMCID:: PMC2773195

Abstract Article

Select item 250014316.

The Csk-binding protein PAG regulates PDGF-induced Src mitogenic signaling via GM1

Laurence Veracini, Valérie Simon, Véronique Richard, Burkhart Schraven, Vaclav Horejsi, Serge Roche, Christine Benistant

J Cell Biol. 2008 Aug 11; 182(3): 603–614. doi: 10.1083/jcb.200705102

PMCID:: PMC2500143

Abstract Article PDF–2.6M

Select item 221344217.

Phosphoprotein Associated with Glycosphingolipid-Enriched Microdomains (Pag), a Novel Ubiquitously Expressed Transmembrane Adaptor Protein, Binds the Protein Tyrosine Kinase Csk and Is Involved in Regulation of T Cell Activation

Tomá

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ka, Dagmar Pavli

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tová, Albrecht Leo, Eddy Bruyns, Vladimír Ko

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ínek, Pavla Angelisová, Jeanette Scherer, Andrej Shevchenko, Anna Shevchenko, Ivan Hilgert, Jan

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erný, Karel Drbal, Yasuhiro Kuramitsu, Birgit Kornacker, Václav Ho

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í, Burkhart Schraven

J Exp Med. 2000 May 1; 191(9): 1591–1604. doi: 10.1084/jem.191.9.1591

PMCID:: PMC2213442

Abstract Article PDF–429K

Select item 129125018.

The Ubiquitously Expressed Csk Adaptor Protein Cbp Is Dispensable for Embryogenesis and T-Cell Development and Function

Marc-Werner Dobenecker, Christian Schmedt, Masato Okada, Alexander Tarakhovsky

Mol Cell Biol. 2005 Dec; 25(23): 10533–10542. doi: 10.1128/MCB.25.23.10533-10542.2005

PMCID:: PMC1291250

Abstract Article PDF–533K

Select item 126573419.

Cbp Deficiency Alters Csk Localization in Lipid Rafts but Does Not Affect T-Cell Development

Shengli Xu, Jianxin Huo, Joy En-Lin Tan, Kong-Peng Lam

Mol Cell Biol. 2005 Oct; 25(19): 8486–8495. doi: 10.1128/MCB.25.19.8486-8495.2005

PMCID:: PMC1265734

Abstract Article PDF–494K

Select item 31099220.

RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer

Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki

Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600

PMCID:: PMC310992

Abstract Article PDF–3.4M

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