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Items: 1 to 20 of 21

1.
TGF-β signaling and Creb5 cooperatively regulate Fgf18 to control pharyngeal muscle development
Jifan Feng, Xia Han, Yuan Yuan, Courtney Kyeong Cho, Eva Janečková, Tingwei Guo, Siddhika Pareek, Md Shaifur Rahman, Banghong Zheng, Jing Bi, Junjun Jing, Mingyi Zhang, Jian Xu, Thach-Vu Ho, Yang Chai
eLife. 2022; 11: e80405. Published online 2022 Dec 21. doi: 10.7554/eLife.80405
PMCID:
PMC9771365
AbstractArticlePDF–17M
2.
Single-cell RNA transcriptomic analysis identifies Creb5 and CD11b-DCs as regulator of asthma exacerbations
Xiaojie Liu, Keilah G. Netto, Leon A. Sokulsky, Lujia Zhou, Huisha Xu, Chi Liu, Ming Wang, Huaqi Wang, Hui Li, Guojun Zhang, Paul S. Foster, Fuguang Li, Ming Yang
Mucosal Immunol. 2022; 15(6): 1363–1374. Published online 2022 Aug 29. doi: 10.1038/s41385-022-00556-1
PMCID:
PMC9705253
AbstractArticlePDF–6.0M
3.
Creb5 coordinates synovial joint formation with the genesis of articular cartilage
Cheng-Hai Zhang, Yao Gao, Han-Hwa Hung, Zhu Zhuo, Alan J. Grodzinsky, Andrew B. Lassar
Nat Commun. 2022; 13: 7295. Published online 2022 Nov 26. doi: 10.1038/s41467-022-35010-0
PMCID:
PMC9701237
AbstractArticlePDF–10M
4.
Control of spinal motor neuron terminal differentiation through sustained Hoxc8 gene activity
Catarina Catela, Yihan Chen, Yifei Weng, Kailong Wen, Paschalis Kratsios
eLife. 2022; 11: e70766. Published online 2022 Mar 22. doi: 10.7554/eLife.70766
PMCID:
PMC8940177
AbstractArticlePDF–6.0M
5.
Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development
Francesco Bedogni, Robert F. Hevner
Front Mol Neurosci. 2021; 14: 686034. Published online 2021 Jul 12. doi: 10.3389/fnmol.2021.686034
PMCID:
PMC8313239
AbstractArticlePDF–1.6M
6.
Cis-Repression of Foxq1 Expression Affects Foxf2-Mediated Gene Expression in Palate Development
Jingyue Xu, Han Liu, Yu Lan, Rulang Jiang
Front Cell Dev Biol. 2021; 9: 665109. Published online 2021 Apr 8. doi: 10.3389/fcell.2021.665109
PMCID:
PMC8060495
AbstractArticlePDF–4.3M
7.
Transcriptional Trajectories in Mouse Limb Buds Reveal the Transition from Anterior-Posterior to Proximal-Distal Patterning at Early Limb Bud Stage
Ines Desanlis, Rachel Paul, Marie Kmita
J Dev Biol. 2020 Dec; 8(4): 31. Published online 2020 Dec 7. doi: 10.3390/jdb8040031
PMCID:
PMC7768367
AbstractArticlePDF–9.5M
8.
Genome-wide Identification of Foxf2 Target Genes in Palate Development
J. Xu, H. Liu, Y. Lan, J.S. Park, R. Jiang
J Dent Res. 2020 Apr; 99(4): 463–471. Published online 2020 Feb 10. doi: 10.1177/0022034520904018
PMCID:
PMC7088206
AbstractArticlePDF–2.0M
9.
Irisin Mediates Effects on Bone and Fat via αV Integrin Receptors
Hyeonwoo Kim, Christiane D. Wrann, Mark Jedrychowski, Sara Vidoni, Yukiko Kitase, Kenichi Nagano, Chenhe Zhou, Joshua Chou, Virginia-Jeni A. Parkman, Scott J. Novick, Timothy S. Strutzenberg, Bruce D. Pascal, Phuong T. Le, Daniel J. Brooks, Alexander M. Roche, Kaitlyn K. Gerber, Laura Mattheis, Wenjing Chen, Hua Tu, Mary L. Bouxsein, Patrick R. Griffin, Roland Baron, Clifford J. Rosen, Lynda F. Bonewald, Bruce M. Spiegelman
Cell. Author manuscript; available in PMC 2019 Dec 13.
Published in final edited form as: Cell. 2018 Dec 13; 175(7): 1756–1768.e17. doi: 10.1016/j.cell.2018.10.025
Correction in:
Cell. 2019 Jul 11; 178(2): 507–508.
PMCID:
PMC6298040
AbstractArticlePDF–1.2M
10.
Distinct transcriptomic changes in E14.5 mouse skeletal muscle lacking RYR1 or Cav1.1 converge at E18.5
Dilyana Filipova, Margit Henry, Tamara Rotshteyn, Anna Brunn, Mariana Carstov, Martina Deckert, Jürgen Hescheler, Agapios Sachinidis, Gabriele Pfitzer, Symeon Papadopoulos
PLoS One. 2018; 13(3): e0194428. Published online 2018 Mar 15. doi: 10.1371/journal.pone.0194428
PMCID:
PMC5854361
AbstractArticlePDF–29M
11.
Parallel Pbx-Dependent Pathways Govern the Coalescence and Fate of Motor Columns
Olivia Hanley, Rediet Zewdu, Lisa J. Cohen, Heekyung Jung, Julie Lacombe, Polyxeni Philippidou, David H. Lee, Licia Selleri, Jeremy S. Dasen
Neuron. Author manuscript; available in PMC 2017 Sep 7.
Published in final edited form as: Neuron. 2016 Sep 7; 91(5): 1005–1020. Published online 2016 Aug 25. doi: 10.1016/j.neuron.2016.07.043
PMCID:
PMC5017921
AbstractArticlePDF–3.5M
12.
Spatiotemporal regulation of GLI target genes in the mammalian limb bud
Jordan P. Lewandowski, Fang Du, Shilu Zhang, Marian B. Powell, Kristin N. Falkenstein, Hongkai Ji, Steven A. Vokes
Dev Biol. Author manuscript; available in PMC 2016 Oct 1.
Published in final edited form as: Dev Biol. 2015 Oct 1; 406(1): 92–103. Published online 2015 Jul 31. doi: 10.1016/j.ydbio.2015.07.022
PMCID:
PMC4587286
AbstractArticlePDF–2.0M
13.
Transcriptomic Analysis of Murine Embryos Lacking Endogenous Retinoic Acid Signaling
Marie Paschaki, Carole Schneider, Muriel Rhinn, Christelle Thibault-Carpentier, Doulaye Dembélé, Karen Niederreither, Pascal Dollé
PLoS One. 2013; 8(4): e62274. Published online 2013 Apr 24. doi: 10.1371/journal.pone.0062274
PMCID:
PMC3634737
AbstractArticlePDF–3.3M
14.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
15.
A Systems Approach Reveals that the Myogenesis Genome Network Is Regulated by the Transcriptional Repressor RP58
Shigetoshi Yokoyama, Yoshiaki Ito, Hiroe Ueno-Kudoh, Hirohito Shimizu, Kenta Uchibe, Sonia Albini, Kazuhiko Mitsuoka, Shigeru Miyaki, Minako Kiso, Akane Nagai, Tomohiro Hikata, Tadahiro Osada, Noritsugu Fukuda, Satoshi Yamashita, Daisuke Harada, Valeria Mezzano, Masataka Kasai, Pier Lorenzo Puri, Yoshihide Hayashizaki, Haruo Okado, Megumi Hashimoto, Hiroshi Asahara
Dev Cell. Author manuscript; available in PMC 2011 Jun 7.
Published in final edited form as: Dev Cell. 2009 Dec; 17(6): 836–848. doi: 10.1016/j.devcel.2009.10.011
PMCID:
PMC3110151
AbstractArticlePDF–2.0M
16.
A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo
Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio
PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582
PMCID:
PMC3022534
AbstractArticlePDF–3.8M
17.
The Role of ATF-2 Family Transcription Factors in Adipocyte Differentiation: Antiobesity Effects of p38 Inhibitors
Toshio Maekawa, Wanzhu Jin, Shunsuke Ishii
Mol Cell Biol. 2010 Feb; 30(3): 613–625. Published online 2009 Nov 30. doi: 10.1128/MCB.00685-09
PMCID:
PMC2812240
AbstractArticlePDF–3.1M
18.
The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)
Genome Res. 2004 Oct; 14(10b): 2121–2127. doi: 10.1101/gr.2596504
Correction in:
Genome Res. 2006 Jun; 16(6): 804.
PMCID:
PMC528928
AbstractArticlePDF–140K
19.
RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer
Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki
Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600
PMCID:
PMC310992
AbstractArticlePDF–3.4M
20.
Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes
Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki
Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100
PMCID:
PMC310980
AbstractArticlePDF–1.4M

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