PMC Links for GEO Profiles (Select 21864538) - PMC

Judith Bossen, Ruben Prange, Jan-Philip Kühle, Sven Künzel, Xiao Niu, Jörg U. Hammel, Laura Krieger, Mirjam Knop, Birte Ehrhardt, Karin Uliczka, Susanne Krauss-Etschmann, Thomas Roeder

Int J Mol Sci. 2023 Mar; 24(6): 5628. Published online 2023 Mar 15. doi: 10.3390/ijms24065628

PMCID:: PMC10052349

Abstract Article PDF–5.6M

Select item 99335174.

Manual curation and phylogenetic analysis of chitinase family genes in the Asian citrus psyllid, Diaphorina citri

Teresa D. Shippy, Sherry Miller, Blessy Tamayo, Prashant S. Hosmani, Mirella Flores-Gonzalez, Lukas A. Mueller, Wayne B. Hunter, Susan J. Brown, Tom D’Elia, Surya Saha

GigaByte. 2022; 2022: gigabyte46. Published online 2022 Mar 17. doi: 10.46471/gigabyte.46

PMCID:: PMC9933517

Abstract Article PDF–1.0M

Select item 99104135.

Imaginal disk growth factors are Drosophila chitinase-like proteins with roles in morphogenesis and CO₂ response

Anne E Sustar, Liesl G Strand, Sandra G Zimmerman, Celeste A Berg

Genetics. 2023 Feb; 223(2): iyac185. Published online 2022 Dec 28. doi: 10.1093/genetics/iyac185

PMCID:: PMC9910413

Abstract Article PDF–1.9M

Select item 74148806.

Glycosylhydrolase genes control respiratory tubes sizes and airway stability

Matthias Behr, Dietmar Riedel

Sci Rep. 2020; 10: 13377. Published online 2020 Aug 7. doi: 10.1038/s41598-020-70185-w

PMCID:: PMC7414880

Abstract Article PDF–2.9M

Select item 68353967.

Expansion of Imaginal Disc Growth Factor Gene Family in Diptera Reflects the Evolution of Novel Functions

Martina Zurovcova, Vladimir Benes, Michal Zurovec, Lucie Kucerova

Insects. 2019 Oct; 10(10): 365. Published online 2019 Oct 20. doi: 10.3390/insects10100365

PMCID:: PMC6835396

Abstract Article PDF–1.2M

Select item 57078058.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 56890029.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 549919810.

Proteomics Analysis Identifies Orthologs of Human Chitinase-Like Proteins as Inducers of Tube Morphogenesis Defects in Drosophila melanogaster

Sandra G. Zimmerman, Gennifer E. Merrihew, Michael J. MacCoss, Celeste A. Berg

Genetics. 2017 Jun; 206(2): 973–984. Published online 2017 Apr 12. doi: 10.1534/genetics.116.199323

PMCID:: PMC5499198

Abstract Article PDF–2.3M

Select item 512686411.

Latitudinal clines in gene expression and cis-regulatory element variation in Drosophila melanogaster

Punita Juneja, Andrew Quinn, Francis M. Jiggins

BMC Genomics. 2016; 17: 981. Published online 2016 Nov 28. doi: 10.1186/s12864-016-3333-7

PMCID:: PMC5126864

Abstract Article PDF–1.1M

Select item 488965812.

mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster

Gildas Lepennetier, Francesco Catania

G3 (Bethesda) 2016 Jun; 6(6): 1617–1626. Published online 2016 Mar 28. doi: 10.1534/g3.116.029231

PMCID:: PMC4889658

Abstract Article PDF–1.5M

Select item 473824713.

Chitinases and Imaginal disc growth factors organize the extracellular matrix formation at barrier tissues in insects

Yanina-Yasmin Pesch, Dietmar Riedel, Kapil R Patil, Gerrit Loch, Matthias Behr

Sci Rep. 2016; 6: 18340. Published online 2016 Feb 3. doi: 10.1038/srep18340

PMCID:: PMC4738247

Abstract Article PDF–2.8M

Select item 452833014.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 452832915.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

Select item 435288716.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114

PMCID:: PMC4352887

Abstract Article PDF–1022K

Select item 427152717.

Phylostratigraphic Bias Creates Spurious Patterns of Genome Evolution

Bryan A. Moyers, Jianzhi Zhang

Mol Biol Evol. 2015 Jan 1; 32(1): 258–267. Published online 2014 Oct 13. doi: 10.1093/molbev/msu286

Correction in:: Mol Biol Evol. 2016 Nov; 33(11): 3031.

PMCID:: PMC4271527

Abstract Article PDF–618K

Select item 386152418.

p120 Catenin Is Required for the Stress Response in Drosophila

Rhoda K. Stefanatos, Christin Bauer, Marcos Vidal

PLoS One. 2013; 8(12): e83942. Published online 2013 Dec 12. doi: 10.1371/journal.pone.0083942

PMCID:: PMC3861524

Abstract Article PDF–2.3M

Select item 368862019.

The Hemolymph Proteome of Fed and Starved Drosophila Larvae

Björn Handke, Ingrid Poernbacher, Sandra Goetze, Christian H. Ahrens, Ulrich Omasits, Florian Marty, Nikiana Simigdala, Imke Meyer, Bernd Wollscheid, Erich Brunner, Ernst Hafen, Christian F. Lehner

PLoS One. 2013; 8(6): e67208. Published online 2013 Jun 20. doi: 10.1371/journal.pone.0067208

PMCID:: PMC3688620

Abstract Article PDF–1.5M

Select item 353067720.

High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression

Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras

Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112

PMCID:: PMC3530677

Abstract Article PDF–1.5M

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