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Items: 1 to 20 of 77

1.
Tissue-specific RNA Polymerase II promoter-proximal pause release and burst kinetics in a Drosophila embryonic patterning network
George Hunt, Roshan Vaid, Sergei Pirogov, Alexander Pfab, Christoph Ziegenhain, Rickard Sandberg, Johan Reimegård, Mattias Mannervik
Genome Biol. 2024; 25: 2. Published online 2024 Jan 2. doi: 10.1186/s13059-023-03135-0
PMCID:
PMC10763363
AbstractArticlePDF–9.8M
2.
Damage sensing mediated by serine proteases Hayan and Persephone for Toll pathway activation in apoptosis-deficient flies
Shotaro Nakano, Soshiro Kashio, Kei Nishimura, Asuka Takeishi, Hina Kosakamoto, Fumiaki Obata, Erina Kuranaga, Takahiro Chihara, Yoshio Yamauchi, Toshiaki Isobe, Masayuki Miura
PLoS Genet. 2023 Jun; 19(6): e1010761. Published online 2023 Jun 15. doi: 10.1371/journal.pgen.1010761
PMCID:
PMC10270351
AbstractArticlePDF–2.8M
3.
The epithelial polarity genes frazzled and GUK-holder adjust morphogen gradients to coordinate changes in cell position with cell fate specification
Yongqiang Xue, Aravindan Krishnan, Juan Sebastian Chahda, Robert Allen Schweickart, Rui Sousa-Neves, Claudia Mieko Mizutani
PLoS Biol. 2023 Mar; 21(3): e3002021. Published online 2023 Mar 13. doi: 10.1371/journal.pbio.3002021
PMCID:
PMC10035841
AbstractArticlePDF–4.2M
4.
Injury-induced inflammatory signaling and hematopoiesis in Drosophila
Cory J. Evans, Ting Liu, Juliet R. Girard, Utpal Banerjee
Proc Natl Acad Sci U S A. 2022 Mar 22; 119(12): e2119109119. Published online 2022 Mar 14. doi: 10.1073/pnas.2119109119
PMCID:
PMC8944666
AbstractArticlePDF–2.5M
5.
Independence of chromatin conformation and gene regulation during Drosophila dorsoventral patterning
Elizabeth Ing-Simmons, Roshan Vaid, Xin Yang Bing, Michael Levine, Mattias Mannervik, Juan M. Vaquerizas
Nat Genet. 2021; 53(4): 487–499. Published online 2021 Apr 1. doi: 10.1038/s41588-021-00799-x
PMCID:
PMC8035076
AbstractArticlePDF–12M
6.
A SuperFamily-Wide Activity Atlas of Serine Hydrolases in Drosophila Melanogaster
Kundan Kumar, Amol Mhetre, Girish S. Ratnaparkhi, Siddhesh S. Kamat
Biochemistry. Author manuscript; available in PMC 2021 Oct 27.
Published in final edited form as: Biochemistry. 2021 Apr 27; 60(16): 1312–1324. Published online 2021 Apr 7. doi: 10.1021/acs.biochem.1c00171
PMCID:
PMC7610703
AbstractArticlePDF–1.7M
7.
Topology-driven protein-protein interaction network analysis detects genetic sub-networks regulating reproductive capacity
Tarun Kumar, Leo Blondel, Cassandra G Extavour
eLife. 2020; 9: e54082. Published online 2020 Sep 9. doi: 10.7554/eLife.54082
PMCID:
PMC7550192
AbstractArticlePDF–2.8M
8.
Isolation of secreted proteins from Drosophila ovaries and embryos through in vivo BirA-mediated biotinylation
Leslie M. Stevens, Yuan Zhang, Yuri Volnov, Geng Chen, David S. Stein
PLoS One. 2019; 14(10): e0219878. Published online 2019 Oct 28. doi: 10.1371/journal.pone.0219878
PMCID:
PMC6816556
AbstractArticlePDF–1.6M
9.
A Drosophila Calcium Channel α1 Subunit Gene Maps to a Genetic Locus Associated with Behavioral and Visual Defects
Lee A. Smith, XinJing Wang, Alexandre A. Peixoto, Eric K. Neumann, Linda M. Hall, Jeffrey C. Hall
J Neurosci. 1996 Dec 15; 16(24): 7868–7879. doi: 10.1523/JNEUROSCI.16-24-07868.1996
PMCID:
PMC6579206
AbstractArticlePDF–605K
10.
A developmental program truncates long transcripts to temporally regulate cell signaling
Jeremy E. Sandler, Jihyun Irizarry, Vincent Stepanik, Leslie Dunipace, Henry Amrhein, Angelike Stathopoulos
Dev Cell. Author manuscript; available in PMC 2019 Dec 17.
Published in final edited form as: Dev Cell. 2018 Dec 17; 47(6): 773–784.e6. doi: 10.1016/j.devcel.2018.11.019
PMCID:
PMC6506262
AbstractArticlePDF–2.2M
11.
Building a platform for predicting functions of serine protease-related proteins in Drosophila melanogaster and other insects
Xiaolong Cao, Haobo Jiang
Insect Biochem Mol Biol. Author manuscript; available in PMC 2019 Dec 1.
Published in final edited form as: Insect Biochem Mol Biol. 2018 Dec; 103: 53–69. Published online 2018 Oct 24. doi: 10.1016/j.ibmb.2018.10.006
PMCID:
PMC6358214
AbstractArticlePDF–6.9M
12.
Spatially restricted regulation of Spätzle/Toll signaling during cell competition
Lale Alpar, Cora Bergantiños, Laura A. Johnston
Dev Cell. Author manuscript; available in PMC 2019 Sep 24.
Published in final edited form as: Dev Cell. 2018 Sep 24; 46(6): 706–719.e5. Published online 2018 Aug 23. doi: 10.1016/j.devcel.2018.08.001
PMCID:
PMC6156939
AbstractArticlePDF–2.8M
13.
Capicua controls Toll/IL-1 signaling targets independently of RTK regulation
Aikaterini Papagianni, Marta Forés, Wanqing Shao, Shuonan He, Nina Koenecke, María José Andreu, Núria Samper, Ze’ev Paroush, Sergio González-Crespo, Julia Zeitlinger, Gerardo Jiménez
Proc Natl Acad Sci U S A. 2018 Feb 20; 115(8): 1807–1812. Published online 2018 Feb 5. doi: 10.1073/pnas.1713930115
PMCID:
PMC5828586
AbstractArticlePDF–1.7M
14.
Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster
Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira
RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117
PMCID:
PMC5689002
AbstractArticlePDF–4.0M
15.
A novel role for the 3′-5′ exoribonuclease Dis3L2 in controlling cell proliferation and tissue growth
Benjamin P. Towler, Christopher I. Jones, Kirsty L. Harper, Joseph A. Waldron, Sarah F. Newbury
RNA Biol. 2016; 13(12): 1286–1299. Published online 2016 Sep 14. doi: 10.1080/15476286.2016.1232238
PMCID:
PMC5207379
AbstractArticlePDF–1.3M
16.
Drosophila poised enhancers are generated during tissue patterning with the help of repression
Nina Koenecke, Jeff Johnston, Qiye He, Samuel Meier, Julia Zeitlinger
Genome Res. 2017 Jan; 27(1): 64–74. doi: 10.1101/gr.209486.116
PMCID:
PMC5204345
AbstractArticlePDF–825K
17.
A genome-wide resource for the analysis of protein localisation in Drosophila
Mihail Sarov, Christiane Barz, Helena Jambor, Marco Y Hein, Christopher Schmied, Dana Suchold, Bettina Stender, Stephan Janosch, Vinay Vikas KJ, RT Krishnan, Aishwarya Krishnamoorthy, Irene RS Ferreira, Radoslaw K Ejsmont, Katja Finkl, Susanne Hasse, Philipp Kämpfer, Nicole Plewka, Elisabeth Vinis, Siegfried Schloissnig, Elisabeth Knust, Volker Hartenstein, Matthias Mann, Mani Ramaswami, K VijayRaghavan, Pavel Tomancak, Frank Schnorrer
eLife. 2016; 5: e12068. Published online 2016 Feb 20. doi: 10.7554/eLife.12068
PMCID:
PMC4805545
AbstractArticlePDF–9.1M
18.
Maternal control of the Drosophila dorsal–ventral body axis
David S. Stein, Leslie M. Stevens
Wiley Interdiscip Rev Dev Biol. Author manuscript; available in PMC 2016 Jan 24.
Published in final edited form as: Wiley Interdiscip Rev Dev Biol. 2014 Sep-Oct; 3(5): 301–330. Published online 2014 May 29. doi: 10.1002/wdev.138
PMCID:
PMC4724419
AbstractArticlePDF–1.4M
19.
RNA-seq reveals post-transcriptional regulation of Drosophila insulin-like peptide dilp8 and the neuropeptide-like precursor Nplp2 by the exoribonuclease Pacman/XRN1
Christopher I. Jones, Amy L. Pashler, Benjamin P. Towler, Sophie R. Robinson, Sarah F. Newbury
Nucleic Acids Res. 2016 Jan 8; 44(1): 267–280. Published online 2015 Dec 9. doi: 10.1093/nar/gkv1336
PMCID:
PMC4705666
AbstractArticlePDF–7.5M
20.
Actin in the Drosophila Embryo: Is There a Relationship to Developmental Cue Localization?
Elaine L. Bearer
Bioessays. Author manuscript; available in PMC 2015 Dec 1.
Published in final edited form as: Bioessays. 1991 Apr; 13(4): 199–204. doi: 10.1002/bies.950130410
PMCID:
PMC4666703
AbstractArticlePDF–124K

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