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Select item 106355731.

The pleiotropic functions of Pri smORF peptides synchronize leg development regulators

Damien Markus, Aurore Pelletier, Muriel Boube, Fillip Port, Michael Boutros, François Payre, Benedikt Obermayer, Jennifer Zanet

PLoS Genet. 2023 Oct; 19(10): e1011004. Published online 2023 Oct 30. doi: 10.1371/journal.pgen.1011004

PMCID:: PMC10635573

Abstract Article PDF–4.5M

Select item 104827002.

SCENIC+: single-cell multiomic inference of enhancers and gene regulatory networks

Carmen Bravo González-Blas, Seppe De Winter, Gert Hulselmans, Nikolai Hecker, Irina Matetovici, Valerie Christiaens, Suresh Poovathingal, Jasper Wouters, Sara Aibar, Stein Aerts

Nat Methods. 2023; 20(9): 1355–1367. Published online 2023 Jul 13. doi: 10.1038/s41592-023-01938-4

PMCID:: PMC10482700

Abstract Article PDF–27M

Select item 104107493.

Using single-cell RNA sequencing to generate predictive cell-type-specific split-GAL4 reagents throughout development

Yu-Chieh David Chen, Yen-Chung Chen, Raghuvanshi Rajesh, Nathalie Shoji, Maisha Jacy, Haluk Lacin, Ted Erclik, Claude Desplan

Proc Natl Acad Sci U S A. 2023 Aug 8; 120(32): e2307451120. Published online 2023 Jul 31. doi: 10.1073/pnas.2307451120

PMCID:: PMC10410749

Abstract Article PDF–4.8M

Select item 102380944.

Shared enhancer gene regulatory networks between wound and oncogenic programs

Swann Floc'hlay, Ramya Balaji, Dimitrije Stanković, Valerie M Christiaens, Carmen Bravo González-Blas, Seppe De Winter, Gert J Hulselmans, Maxime De Waegeneer, Xiaojiang Quan, Duygu Koldere, Mardelle Atkins, Georg Halder, Mirka Uhlirova, Anne-Kathrin Classen, Stein Aerts

eLife. 2023; 12: e81173. Published online 2023 May 3. doi: 10.7554/eLife.81173

PMCID:: PMC10238094

Abstract Article PDF–8.8M

Select item 101057365.

Next-generation large-scale binary protein interaction network for Drosophila melanogaster

Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István A. Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth H. Wan, Joel S. Bader, Dawit Balcha, Wenting Bian, Benjamin W. Booth, Atina G. Coté, Steffi de Rouck, Alice Desbuleux, Kah Yong Goh, Dae-Kyum Kim, Jennifer J. Knapp, Wen Xing Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Julianne Lim, Yifang Liu, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Dayag Sheykhkarimli, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael A. Calderwood, David E. Hill, Susan E. Celniker, Marc Vidal, Norbert Perrimon, Stephanie E. Mohr

Nat Commun. 2023; 14: 2162. Published online 2023 Apr 15. doi: 10.1038/s41467-023-37876-0

PMCID:: PMC10105736

Abstract Article PDF–3.2M

Select item 96356446.

Enteric bacterial infection in Drosophila induces whole-body alterations in metabolic gene expression independently of the immune deficiency signaling pathway

Rujuta Deshpande, Byoungchun Lee, Savraj S Grewal

G3 (Bethesda) 2022 Nov; 12(11): jkac163. Published online 2022 Jul 4. doi: 10.1093/g3journal/jkac163

PMCID:: PMC9635644

Abstract Article PDF–2.2M

Select item 95443507.

Dachshund acts with Abdominal‐B to trigger programmed cell death in the Drosophila central nervous system at the frontiers of Abd‐B expression

Luis Clarembaux‐Badell, Pablo Baladrón‐de‐Juan, Hugo Gabilondo, Irene Rubio‐Ferrera, Irene Millán, Carlos Estella, Félix S. Valverde‐Ortega, Ignacio Monedero Cobeta, Stefan Thor, Jonathan Benito‐Sipos

Dev Neurobiol. 2022 Sep; 82(6): 495–504. Published online 2022 Jul 10. doi: 10.1002/dneu.22894

PMCID:: PMC9544350

Abstract Article PDF–4.1M

Select item 93989988.

A promoter-proximal silencer modifies the activity of a shared enhancer to mediate divergent expression of nub and pdm2 paralogs in wing development

Ryan Loker, Richard S. Mann

Curr Biol. Author manuscript; available in PMC 2023 Aug 22.

Published in final edited form as: Curr Biol. 2022 Aug 22; 32(16): 3545–3555.e4. Published online 2022 Jul 18. doi: 10.1016/j.cub.2022.06.069

PMCID:: PMC9398998

Abstract Article PDF–2.9M

Select item 93871199.

Ets21C sustains a pro-regenerative transcriptional program in blastema cells of Drosophila imaginal discs

Melanie I. Worley, Nicholas J. Everetts, Riku Yasutomi, Rebecca J. Chang, Shrey Saretha, Nir Yosef, Iswar K. Hariharan

Curr Biol. Author manuscript; available in PMC 2023 Aug 8.

Published in final edited form as: Curr Biol. 2022 Aug 8; 32(15): 3350–3364.e6. Published online 2022 Jul 11. doi: 10.1016/j.cub.2022.06.040

PMCID:: PMC9387119

Abstract Article PDF–4.5M

Select item 895917510.

A shared ancient enhancer element differentially regulates the bric-a-brac tandem gene duplicates in the developing Drosophila leg

Henri-Marc G. Bourbon, Mikhail H. Benetah, Emmanuelle Guillou, Luis Humberto Mojica-Vazquez, Aissette Baanannou, Sandra Bernat-Fabre, Vincent Loubiere, Frédéric Bantignies, Giacomo Cavalli, Muriel Boube

PLoS Genet. 2022 Mar; 18(3): e1010083. Published online 2022 Mar 16. doi: 10.1371/journal.pgen.1010083

PMCID:: PMC8959175

Abstract Article PDF–2.7M

Select item 859981911.

Transcriptional Correlates of Chronic Alcohol Neuroadaptation in Drosophila Larvae

Amanda Anqueira-González, Jenny P. Acevedo-Gonzalez, Airined Montes-Mercado, Claudia Irizarry-Hernández, Nicolás L. Fuenzalida-Uribe, Alfredo Ghezzi

Front Behav Neurosci. 2021; 15: 768694. Published online 2021 Nov 4. doi: 10.3389/fnbeh.2021.768694

PMCID:: PMC8599819

Abstract Article PDF–1.0M

Select item 787014612.

Single-cell transcriptomes of developing and adult olfactory receptor neurons in Drosophila

Colleen N McLaughlin, Maria Brbić, Qijing Xie, Tongchao Li, Felix Horns, Sai Saroja Kolluru, Justus M Kebschull, David Vacek, Anthony Xie, Jiefu Li, Robert C Jones, Jure Leskovec, Stephen R Quake, Liqun Luo, Hongjie Li

eLife. 2021; 10: e63856. Published online 2021 Feb 8. doi: 10.7554/eLife.63856

PMCID:: PMC7870146

Abstract Article PDF–11M

Select item 785159613.

Genomics of Recombination Rate Variation in Temperature-Evolved Drosophila melanogaster Populations

Ari Winbush, Nadia D Singh

Genome Biol Evol. 2021 Jan; 13(1): evaa252. Published online 2020 Nov 28. doi: 10.1093/gbe/evaa252

PMCID:: PMC7851596

Abstract Article PDF–778K

Select item 749778314.

Frizzled-Dependent Planar Cell Polarity without Secreted Wnt Ligands

Joyce J.S. Yu, Aude Maugarny-Calès, Stéphane Pelletier, Cyrille Alexandre, Yohanns Bellaiche, Jean-Paul Vincent, Ian J. McGough

Dev Cell. 2020 Sep 14; 54(5): 583–592.e5. doi: 10.1016/j.devcel.2020.08.004

PMCID:: PMC7497783

Abstract Article

Select item 696157815.

CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans

Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang

Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119

PMCID:: PMC6961578

Abstract Article PDF–3.6M

Select item 668445616.

Insights into Regeneration Tool Box: An Animal Model Approach

Abijeet S. Mehta, Amit Singh

Dev Biol. Author manuscript; available in PMC 2020 Sep 15.

Published in final edited form as: Dev Biol. 2019 Sep 15; 453(2): 111–129. Published online 2019 Apr 13. doi: 10.1016/j.ydbio.2019.04.006

PMCID:: PMC6684456

Abstract Article PDF–2.4M

Select item 667437417.

A Pheromone Receptor Mediates 11-cis-Vaccenyl Acetate-Induced Responses in Drosophila

Tal Soo Ha, Dean P. Smith

J Neurosci. 2006 Aug 23; 26(34): 8727–8733. doi: 10.1523/JNEUROSCI.0876-06.2006

PMCID:: PMC6674374

Abstract Article PDF–402K

Select item 648595618.

A Comprehensive Drosophila melanogaster Transcription Factor Interactome

Leila Shokri, Sachi Inukai, Antonina Hafner, Kathryn Weinand, Korneel Hens, Anastasia Vedenko, Stephen S. Gisselbrecht, Riccardo Dainese, Johannes Bischof, Edy Furger, Jean-Daniel Feuz, Konrad Basler, Bart Deplancke, Martha L. Bulyk

Cell Rep. Author manuscript; available in PMC 2019 Apr 26.

Published in final edited form as: Cell Rep. 2019 Apr 16; 27(3): 955–970.e7. doi: 10.1016/j.celrep.2019.03.071

PMCID:: PMC6485956

Abstract Article PDF–1.6M

Select item 632589519.

Nuclear Transcriptomes of the Seven Neuronal Cell Types That Constitute the Drosophila Mushroom Bodies

Meng-Fu Maxwell Shih, Fred Pejman Davis, Gilbert Lee Henry, Josh Dubnau

G3 (Bethesda) 2019 Jan; 9(1): 81–94. Published online 2018 Nov 5. doi: 10.1534/g3.118.200726

PMCID:: PMC6325895

Abstract Article PDF–2.0M

Select item 617725720.

Generation of a versatile BiFC ORFeome library for analyzing protein–protein interactions in live Drosophila

Johannes Bischof, Marilyne Duffraisse, Edy Furger, Leiore Ajuria, Guillaume Giraud, Solene Vanderperre, Rachel Paul, Mikael Björklund, Damien Ahr, Alexis W Ahmed, Lionel Spinelli, Christine Brun, Konrad Basler, Samir Merabet

eLife. 2018; 7: e38853. Published online 2018 Sep 24. doi: 10.7554/eLife.38853

PMCID:: PMC6177257

Abstract Article PDF–4.9M

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