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Items: 1 to 20 of 42

1.
Genetic and Epigenetic Regulation of Drosophila Oocyte Determination
Brigite Cabrita, Rui Gonçalo Martinho
J Dev Biol. 2023 Jun; 11(2): 21. Published online 2023 May 24. doi: 10.3390/jdb11020021
PMCID:
PMC10299578
AbstractArticlePDF–1.2M
2.
Systematic analysis of YFP traps reveals common mRNA/protein discordance in neural tissues
Joshua S. Titlow, Maria Kiourlappou, Ana Palanca, Jeffrey Y. Lee, Dalia S. Gala, Darragh Ennis, Joyce J.S. Yu, Florence L. Young, David Miguel Susano Pinto, Sam Garforth, Helena S. Francis, Finn Strivens, Hugh Mulvey, Alex Dallman-Porter, Staci Thornton, Diana Arman, Marissa J. Millard, Aino I. Järvelin, Mary Kay Thompson, Martin Sargent, Ilias Kounatidis, Richard M. Parton, Stephen Taylor, Ilan Davis
J Cell Biol. 2023 Jun 5; 222(6): e202205129. Published online 2023 May 5. doi: 10.1083/jcb.202205129
PMCID:
PMC10165541
AbstractArticlePDF–8.4M
3.
Proximity labeling reveals a new in vivo network of interactors for the histone demethylase KDM5
Matanel Yheskel, Simone Sidoli, Julie Secombe
Epigenetics Chromatin. 2023; 16: 8. Published online 2023 Feb 18. doi: 10.1186/s13072-023-00481-y
PMCID:
PMC9938590
AbstractArticlePDF–4.8M
4.
Stonewall prevents expression of ectopic genes in the ovary and accumulates at insulator elements in D. melanogaster
Daniel Zinshteyn, Daniel A. Barbash
PLoS Genet. 2022 Mar; 18(3): e1010110. Published online 2022 Mar 24. doi: 10.1371/journal.pgen.1010110
PMCID:
PMC8982855
AbstractArticlePDF–2.7M
5.
Unravelling HP1 functions: post-transcriptional regulation of stem cell fate
Assunta Maria Casale, Ugo Cappucci, Lucia Piacentini
Chromosoma. 2021; 130(2-3): 103–111. Published online 2021 Jun 15. doi: 10.1007/s00412-021-00760-1
PMCID:
PMC8426308
AbstractArticlePDF–1.3M
6.
Novel perspectives of target-binding by the evolutionarily conserved PP4 phosphatase
Zoltan Karman, Zsuzsanna Rethi-Nagy, Edit Abraham, Lilla Fabri-Ordogh, Akos Csonka, Peter Vilmos, Janusz Debski, Michal Dadlez, David M. Glover, Zoltan Lipinszki
Open Biol. 2020 Dec; 10(12): 200343. Published online 2020 Dec 23. doi: 10.1098/rsob.200343
PMCID:
PMC7776573
AbstractArticlePDF–941K
7.
A Comprehensive Drosophila melanogaster Transcription Factor Interactome
Leila Shokri, Sachi Inukai, Antonina Hafner, Kathryn Weinand, Korneel Hens, Anastasia Vedenko, Stephen S. Gisselbrecht, Riccardo Dainese, Johannes Bischof, Edy Furger, Jean-Daniel Feuz, Konrad Basler, Bart Deplancke, Martha L. Bulyk
Cell Rep. Author manuscript; available in PMC 2019 Apr 26.
Published in final edited form as: Cell Rep. 2019 Apr 16; 27(3): 955–970.e7. doi: 10.1016/j.celrep.2019.03.071
PMCID:
PMC6485956
AbstractArticlePDF–1.6M
8.
Stonewall and Brickwall: Two Partially Redundant Determinants Required for the Maintenance of Female Germline in Drosophila
Vallari Shukla, Neena Dhiman, Prajna Nayak, Neelesh Dahanukar, Girish Deshpande, Girish S. Ratnaparkhi
G3 (Bethesda) 2018 Jun; 8(6): 2027–2041. Published online 2018 Apr 24. doi: 10.1534/g3.118.200192
PMCID:
PMC5982830
AbstractArticlePDF–2.3M
9.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
AbstractArticlePDF–3.2M
10.
Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster
Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira
RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117
PMCID:
PMC5689002
AbstractArticlePDF–4.0M
11.
A genome-wide resource for the analysis of protein localisation in Drosophila
Mihail Sarov, Christiane Barz, Helena Jambor, Marco Y Hein, Christopher Schmied, Dana Suchold, Bettina Stender, Stephan Janosch, Vinay Vikas KJ, RT Krishnan, Aishwarya Krishnamoorthy, Irene RS Ferreira, Radoslaw K Ejsmont, Katja Finkl, Susanne Hasse, Philipp Kämpfer, Nicole Plewka, Elisabeth Vinis, Siegfried Schloissnig, Elisabeth Knust, Volker Hartenstein, Matthias Mann, Mani Ramaswami, K VijayRaghavan, Pavel Tomancak, Frank Schnorrer
eLife. 2016; 5: e12068. Published online 2016 Feb 20. doi: 10.7554/eLife.12068
PMCID:
PMC4805545
AbstractArticlePDF–9.1M
12.
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders
Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937
PMCID:
PMC4528330
AbstractArticlePDF–2.2M
13.
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data
Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929
PMCID:
PMC4528329
AbstractArticlePDF–4.9M
14.
The Drosophila Retinoblastoma Binding Protein 6 Family Member Has Two Isoforms and Is Potentially Involved in Embryonic Patterning
Rodney Hull, Brent Oosthuysen, Umar-Faruq Cajee, Lehlogonolo Mokgohloa, Ekene Nweke, Ricardo Jorge Antunes, Theresa H. T. Coetzer, Monde Ntwasa
Int J Mol Sci. 2015 May; 16(5): 10242–10266. Published online 2015 May 6. doi: 10.3390/ijms160510242
PMCID:
PMC4463644
AbstractArticlePDF–2.2M
15.
Adaptive Evolution of Genes Involved in the Regulation of Germline Stem Cells in Drosophila melanogaster and D. simulans
Heather A. Flores, Vanessa L. Bauer DuMont, Aalya Fatoo, Diana Hubbard, Mohammed Hijji, Daniel A. Barbash, Charles F. Aquadro
G3 (Bethesda) 2015 Apr; 5(4): 583–592. Published online 2015 Feb 9. doi: 10.1534/g3.114.015875
PMCID:
PMC4390574
AbstractArticlePDF–995K
16.
A large-scale, in vivo transcription factor screen defines bivalent chromatin as a key property of regulatory factors mediating Drosophila wing development
Claus Schertel, Monica Albarca, Claudia Rockel-Bauer, Nicholas W. Kelley, Johannes Bischof, Korneel Hens, Erik van Nimwegen, Konrad Basler, Bart Deplancke
Genome Res. 2015 Apr; 25(4): 514–523. doi: 10.1101/gr.181305.114
PMCID:
PMC4381523
AbstractArticlePDF–700K
17.
The Release 6 reference sequence of the Drosophila melanogaster genome
Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker
Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114
PMCID:
PMC4352887
AbstractArticlePDF–1022K
18.
Transcriptional and epigenetic responses to mating and aging in Drosophila melanogaster
Shanshan Zhou, Trudy FC Mackay, Robert RH Anholt
BMC Genomics. 2014; 15(1): 927. Published online 2014 Oct 23. doi: 10.1186/1471-2164-15-927
PMCID:
PMC4221674
AbstractArticlePDF–4.7M
19.
Combining Genetic Perturbations and Proteomics to Examine Kinase-Phosphatase Networks in Drosophila Embryos
Richelle Sopko, Marianna Foos, Arunachalam Vinayagam, Bo Zhai, Richard Binari, Yanhui Hu, Sakara Randklev, Lizabeth A. Perkins, Steven P. Gygi, Norbert Perrimon
Dev Cell. Author manuscript; available in PMC 2015 Oct 13.
Published in final edited form as: Dev Cell. 2014 Oct 13; 31(1): 114–127. Published online 2014 Oct 2. doi: 10.1016/j.devcel.2014.07.027
PMCID:
PMC4208667
AbstractArticlePDF–2.4M
20.
Subcellular localisations of the CPTI collection of YFP-tagged proteins in Drosophila embryos
Claire M. Lye, Huw W. Naylor, Bénédicte Sanson
Development. 2014 Oct; 141(20): 4006–4017. doi: 10.1242/dev.111310
PMCID:
PMC4197698
AbstractArticle

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