PMC Links for GEO Profiles (Select 22447824) - PMC

Ana López-Varea, Patricia Vega-Cuesta, Ana Ruiz-Gómez, Cristina M Ostalé, Cristina Molnar, Covadonga F Hevia, Mercedes Martín, Maria F Organista, Jesus de Celis, Joaquín Culí, Nuria Esteban, Jose F de Celis

G3 (Bethesda) 2021 Dec; 11(12): jkab349. Published online 2021 Oct 2. doi: 10.1093/g3journal/jkab349

PMCID:: PMC8664486

Abstract Article PDF–3.1M

Select item 86452074.

In vivo proximity biotin ligation identifies the interactome of Egalitarian, a Dynein cargo adaptor

Frederick C. Baker, Hannah Neiswender, Rajalakshmi Veeranan-Karmegam, Graydon B. Gonsalvez

Development. 2021 Nov 15; 148(22): dev199935. Published online 2021 Nov 18. doi: 10.1242/dev.199935

PMCID:: PMC8645207

Abstract Article

Select item 74371775.

RNA-recognition motif in Matrin-3 mediates neurodegeneration through interaction with hnRNPM

Nandini Ramesh, Sukhleen Kour, Eric N. Anderson, Dhivyaa Rajasundaram, Udai Bhan Pandey

Acta Neuropathol Commun. 2020; 8: 138. Published online 2020 Aug 18. doi: 10.1186/s40478-020-01021-5

PMCID:: PMC7437177

Abstract Article PDF–9.7M

Select item 69615786.

CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans

Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang

Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119

PMCID:: PMC6961578

Abstract Article PDF–3.6M

Select item 68004687.

Srrm234, but not canonical SR and hnRNP proteins, drive inclusion of Dscam exon 9 variable exons

Pinar Ustaoglu, Irmgard U. Haussmann, Hongzhi Liao, Antonio Torres-Mendez, Roland Arnold, Manuel Irimia, Matthias Soller

RNA. 2019 Oct; 25(10): 1353–1365. doi: 10.1261/rna.071316.119

PMCID:: PMC6800468

Abstract Article PDF–8.9M

Select item 61965058.

Modulation of the Hippo pathway and organ growth by RNA processing proteins

Jana Mach, Mardelle Atkins, Kathleen M. Gajewski, Violaine Mottier-Pavie, Leticia Sansores-Garcia, Jun Xie, Robert Andrew Mills, Weronika Kowalczyk, Leen Van Huffel, Gordon B. Mills, Georg Halder

Proc Natl Acad Sci U S A. 2018 Oct 16; 115(42): 10684–10689. Published online 2018 Sep 26. doi: 10.1073/pnas.1807325115

PMCID:: PMC6196505

Abstract Article PDF–2.5M

Select item 60786049.

Human R1441C LRRK2 regulates the synaptic vesicle proteome and phosphoproteome in a Drosophila model of Parkinson’s disease

Md Shariful Islam, Hendrik Nolte, Wright Jacob, Anna B. Ziegler, Stefanie Pütz, Yael Grosjean, Karolina Szczepanowska, Aleksandra Trifunovic, Thomas Braun, Hermann Heumann, Rolf Heumann, Bernhard Hovemann, Darren J. Moore, Marcus Krüger

Hum Mol Genet. 2016 Dec 15; 25(24): 5365–5382. Published online 2016 Oct 29. doi: 10.1093/hmg/ddw352

PMCID:: PMC6078604

Abstract Article PDF–1.9M

Select item 570780510.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900211.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 557009212.

Major hnRNP proteins act as general TDP-43 functional modifiers both in Drosophila and human neuronal cells

Chiara Appocher, Fatemeh Mohagheghi, Sara Cappelli, Cristiana Stuani, Maurizio Romano, Fabian Feiguin, Emanuele Buratti

Nucleic Acids Res. 2017 Jul 27; 45(13): 8026–8045. Published online 2017 May 31. doi: 10.1093/nar/gkx477

PMCID:: PMC5570092

Abstract Article PDF–6.0M

Select item 556116913.

miR-7 Buffers Differentiation in the Developing Drosophila Visual System

Elizabeth E. Caygill, Andrea H. Brand

Cell Rep. 2017 Aug 8; 20(6): 1255–1261. Published online 2017 Aug 8. doi: 10.1016/j.celrep.2017.07.047

PMCID:: PMC5561169

Abstract Article PDF–3.5M

Select item 549913614.

The Mapping of Predicted Triplex DNA:RNA in the Drosophila Genome Reveals a Prominent Location in Development- and Morphogenesis-Related Genes

Claude Pasquier, Sandra Agnel, Alain Robichon

G3 (Bethesda) 2017 Jul; 7(7): 2295–2304. Published online 2017 May 17. doi: 10.1534/g3.117.042911

PMCID:: PMC5499136

Abstract Article PDF–1.4M

Select item 503306115.

An integrative analysis of the InR/PI3K/Akt network identifies the dynamic response to Insulin signaling

Arunachalam Vinayagam, Meghana M. Kulkarni, Richelle Sopko, Xiaoyun Sun, Yanhui Hu, Ankita Nand, Christians Villalta, Ahmadali Moghimi, Xuemei Yang, Stephanie E. Mohr, Pengyu Hong, John Asara, Norbert Perrimon

Cell Rep. Author manuscript; available in PMC 2016 Sep 22.

Published in final edited form as: Cell Rep. 2016 Sep 13; 16(11): 3062–3074. doi: 10.1016/j.celrep.2016.08.029

PMCID:: PMC5033061

Abstract Article PDF–3.3M

Select item 502578216.

Proteome-wide association studies identify biochemical modules associated with a wing-size phenotype in Drosophila melanogaster

Hirokazu Okada, H. Alexander Ebhardt, Sibylle Chantal Vonesch, Ruedi Aebersold, Ernst Hafen

Nat Commun. 2016; 7: 12649. Published online 2016 Sep 1. doi: 10.1038/ncomms12649

PMCID:: PMC5025782

Abstract Article PDF–2.2M

Select item 497891917.

Phenotypes Associated with Second Chromosome P Element Insertions in Drosophila melanogaster

Lily Kahsai, Gillian H. Millburn, Kevin R. Cook

G3 (Bethesda) 2016 Aug; 6(8): 2665–2670. Published online 2016 Jun 10. doi: 10.1534/g3.116.030940

PMCID:: PMC4978919

Abstract Article PDF–613K

Select item 478811618.

Hedgehog Signaling Strength Is Orchestrated by the mir-310 Cluster of MicroRNAs in Response to Diet

Ibrahim Ömer Çiçek, Samir Karaca, Marko Brankatschk, Suzanne Eaton, Henning Urlaub, Halyna R. Shcherbata

Genetics. 2016 Mar; 202(3): 1167–1183. Published online 2016 Jan 22. doi: 10.1534/genetics.115.185371

PMCID:: PMC4788116

Abstract Article PDF–4.7M

Select item 473831119.

A Cross-Species Study of PI3K Protein-Protein Interactions Reveals the Direct Interaction of P85 and SHP2

Susanne B. Breitkopf, Xuemei Yang, Michael J. Begley, Meghana Kulkarni, Yu-Hsin Chiu, Alexa B. Turke, Jessica Lauriol, Min Yuan, Jie Qi, Jeffrey A. Engelman, Pengyu Hong, Maria I. Kontaridis, Lewis C. Cantley, Norbert Perrimon, John M. Asara

Sci Rep. 2016; 6: 20471. Published online 2016 Feb 3. doi: 10.1038/srep20471

PMCID:: PMC4738311

Abstract Article PDF–1.8M

Select item 473800520.

Proteome-wide dataset supporting the study of ancient metazoan macromolecular complexes

Sadhna Phanse, Cuihong Wan, Blake Borgeson, Fan Tu, Kevin Drew, Greg Clark, Xuejian Xiong, Olga Kagan, Julian Kwan, Alexandr Bezginov, Kyle Chessman, Swati Pal, Graham Cromar, Ophelia Papoulas, Zuyao Ni, Daniel R. Boutz, Snejana Stoilova, Pierre C. Havugimana, Xinghua Guo, Ramy H. Malty, Mihail Sarov, Jack Greenblatt, Mohan Babu, W. Brent Derry, Elisabeth R. Tillier, John B. Wallingford, John Parkinson, Edward M. Marcotte, Andrew Emili

Data Brief. 2016 Mar; 6: 715–721. Published online 2015 Dec 12. doi: 10.1016/j.dib.2015.11.062

PMCID:: PMC4738005

Abstract Article PDF–205K

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