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Select item 105517001.

Misregulation of cell cycle-dependent methylation of budding yeast CENP-A contributes to chromosomal instability

Prashant K. Mishra, Wei-Chun Au, Pedro G. Castineira, Nazrin Ali, John Stanton, Lars Boeckmann, Yoshimitsu Takahashi, Michael Costanzo, Charles Boone, Kerry S. Bloom, Peter H. Thorpe, Munira A. Basrai

Mol Biol Cell. 2023 Sep 1; 34(10): ar99. Published online 2023 Aug 17. doi: 10.1091/mbc.E23-03-0108

PMCID:: PMC10551700

Abstract Article PDF–3.7M

Select item 103996202.

Design and Characterization of Rapid Optogenetic Circuits for Dynamic Control in Yeast Metabolic Engineering

Evan M. Zhao, Makoto A. Lalwani, Robert J. Lovelett, Sergio A. García-Echauri, Shannon M. Hoffman, Christopher L. Gonzalez, Jared E. Toettcher, Ioannis G. Kevrekidis, José L. Avalos

ACS Synth Biol. Author manuscript; available in PMC 2023 Aug 3.

Published in final edited form as: ACS Synth Biol. 2020 Dec 18; 9(12): 3254–3266. Published online 2020 Nov 24. doi: 10.1021/acssynbio.0c00305

PMCID:: PMC10399620

Abstract Article PDF–1.3M

Select item 102350863.

Rio1 downregulates centromeric RNA levels to promote the timely assembly of structurally fit kinetochores

Ksenia Smurova, Michela Damizia, Carmela Irene, Stefania Stancari, Giovanna Berto, Giulia Perticari, Maria Giuseppina Iacovella, Ilaria D’Ambrosio, Maria Giubettini, Réginald Philippe, Chiara Baggio, Elisabetta Callegaro, Andrea Casagranda, Alessandro Corsini, Vincenzo Gentile Polese, Anna Ricci, Erik Dassi, Peter De Wulf

Nat Commun. 2023; 14: 3172. Published online 2023 Jun 1. doi: 10.1038/s41467-023-38920-9

PMCID:: PMC10235086

Abstract Article PDF–2.6M

Select item 98363484.

A synthetic genetic array screen for interactions with the RNA helicase DED1 during cell stress in budding yeast

Sara B Carey, Hannah M List, Ashwin Siby, Paolo Guerra, Timothy A Bolger

G3 (Bethesda) 2023 Jan; 13(1): jkac296. Published online 2022 Nov 21. doi: 10.1093/g3journal/jkac296

PMCID:: PMC9836348

Abstract Article PDF–857K

Select item 92098115.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 88014116.

Transcriptional repressor Gal80 recruits corepressor complex Cyc8–Tup1 to structural genes of the Saccharomyces cerevisiae GAL regulon

Julia Lettow, Rasha Aref, Hans-Joachim Schüller

Curr Genet. 2022; 68(1): 115–124. Published online 2021 Oct 7. doi: 10.1007/s00294-021-01215-x

PMCID:: PMC8801411

Abstract Article PDF–1.2M

Select item 86759267.

What makes a histone variant a variant: Changing H2A to become H2A.Z

Hilary T. Brewis, Alice Y. Wang, Aline Gaub, Justine J. Lau, Peter C. Stirling, Michael S. Kobor

PLoS Genet. 2021 Dec; 17(12): e1009950. Published online 2021 Dec 6. doi: 10.1371/journal.pgen.1009950

PMCID:: PMC8675926

Abstract Article PDF–3.6M

Select item 85616358.

A regulatory phosphorylation site on Mec1 controls chromatin occupancy of RNA polymerases during replication stress

Verena Hurst, Kiran Challa, Felix Jonas, Romain Forey, Ragna Sack, Jan Seebacher, Christoph D Schmid, Naama Barkai, Kenji Shimada, Susan M Gasser, Jérôme Poli

EMBO J. 2021 Nov 2; 40(21): e108439. Published online 2021 Sep 27. doi: 10.15252/embj.2021108439

PMCID:: PMC8561635

Abstract Article PDF–6.1M

Select item 84899259.

Recruitment of Xrn1 to stress-induced genes allows efficient transcription by controlling RNA polymerase II backtracking

José García-Martínez, María E. Pérez-Martínez, José E. Pérez-Ortín, Paula Alepuz

RNA Biol. 2021; 18(10): 1458–1474. Published online 2020 Dec 15. doi: 10.1080/15476286.2020.1857521

PMCID:: PMC8489925

Abstract Article PDF–9.7M

Select item 838457310.

Ancient balancing selection maintains incompatible versions of the galactose pathway in yeast

James Boocock, Meru J. Sadhu, Arun Durvasula, Joshua S. Bloom, Leonid Kruglyak

Science. Author manuscript; available in PMC 2021 Aug 25.

Published in final edited form as: Science. 2021 Jan 22; 371(6527): 415–419. doi: 10.1126/science.aba0542

PMCID:: PMC8384573

Abstract Article PDF–796K

Select item 819177511.

FACT interacts with Set3 HDAC and fine-tunes GAL1 transcription in response to environmental stimulation

He Leng, Shaofeng Liu, Yang Lei, Yuantao Tang, Shijia Gu, Jiazhi Hu, She Chen, Jianxun Feng, Qing Li

Nucleic Acids Res. 2021 Jun 4; 49(10): 5502–5519. Published online 2021 May 8. doi: 10.1093/nar/gkab312

PMCID:: PMC8191775

Abstract Article PDF–3.0M

Select item 803514512.

Chromatin regulatory genes differentially interact in networks to facilitate distinct GAL1 activity and noise profiles

David F. Moreno, Murat Acar

Curr Genet. Author manuscript; available in PMC 2022 Apr 1.

Published in final edited form as: Curr Genet. 2021 Apr; 67(2): 267–281. Published online 2020 Nov 7. doi: 10.1007/s00294-020-01124-5

PMCID:: PMC8035145

Abstract Article PDF–1.0M

Select item 760129813.

Apoptosis, Induced by Human α-Synuclein in Yeast, Can Occur Independent of Functional Mitochondria

Damilare D. Akintade, Bhabatosh Chaudhuri

Cells. 2020 Oct; 9(10): 2203. Published online 2020 Sep 29. doi: 10.3390/cells9102203

PMCID:: PMC7601298

Abstract Article PDF–4.0M

Select item 740216014.

Permutational analysis of Saccharomyces cerevisiae regulatory elements

Namrita Dhillon, Robert Shelansky, Brent Townshend, Miten Jain, Hinrich Boeger, Drew Endy, Rohinton Kamakaka

Synth Biol (Oxf) 2020; 5(1): ysaa007. Published online 2020 Jun 16. doi: 10.1093/synbio/ysaa007

PMCID:: PMC7402160

Abstract Article PDF–1.2M

Select item 734313515.

Sensitivity of yeast to lithium chloride connects the activity of YTA6 and YPR096C to translation of structured mRNAs

Maryam Hajikarimlou, Houman Moteshareie, Katayoun Omidi, Mohsen Hooshyar, Sarah Shaikho, Tom Kazmirchuk, Daniel Burnside, Sarah Takallou, Narges Zare, Sasi Kumar Jagadeesan, Nathalie Puchacz, Mohan Babu, Myron Smith, Martin Holcik, Bahram Samanfar, Ashkan Golshani

PLoS One. 2020; 15(7): e0235033. Published online 2020 Jul 8. doi: 10.1371/journal.pone.0235033

PMCID:: PMC7343135

Abstract Article PDF–2.2M

Select item 732198116.

Cell-size regulation in budding yeast does not depend on linear accumulation of Whi5

Felix Barber, Ariel Amir, Andrew W. Murray

Proc Natl Acad Sci U S A. 2020 Jun 23; 117(25): 14243–14250. Published online 2020 Jun 9. doi: 10.1073/pnas.2001255117

PMCID:: PMC7321981

Abstract Article PDF–1.3M

Select item 708603417.

The yeast protein Ubx4p contributes to mitochondrial respiration and lithium–galactose–mediated activation of the unfolded protein response

Evandro A. De-Souza, Felipe S. A. Pimentel, Ana Luiza F. V. De-Queiroz, Henrique Camara, Mikaella L. Felix-Formiga, Caio M. Machado, Silas Pinto, Antonio Galina, Marcelo A. Mori, Monica Montero-Lomeli, Claudio A. Masuda

J Biol Chem. 2020 Mar 20; 295(12): 3773–3782. Published online 2020 Jan 29. doi: 10.1074/jbc.RA119.011271