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Items: 1 to 20 of 46

1.
A comprehensive Drosophila resource to identify key functional interactions between SARS-CoV-2 factors and host proteins
Annabel Guichard, Shenzhao Lu, Oguz Kanca, Daniel Bressan, Yan Huang, Mengqi Ma, Sara Sanz Juste, Jonathan C. Andrews, Kristy L. Jay, Marketta Sneider, Ruth Schwartz, Mei-Chu Huang, Danqing Bei, Hongling Pan, Liwen Ma, Wen-Wen Lin, Ankush Auradkar, Pranjali Bhagwat, Soo Park, Kenneth H. Wan, Takashi Ohsako, Toshiyuki Takano-Shimizu, Susan E. Celniker, Michael F. Wangler, Shinya Yamamoto, Hugo J. Bellen, Ethan Bier
Cell Rep. Author manuscript; available in PMC 2024 Mar 25.
Published in final edited form as: Cell Rep. 2023 Aug 29; 42(8): 112842. Published online 2023 Jul 20. doi: 10.1016/j.celrep.2023.112842
PMCID:
PMC10962759
AbstractArticlePDF–3.0M
2.
Identification and characterization of a heme exporter from the MRP family in Drosophila melanogaster
Zhiqing Wang, Peng Zeng, Bing Zhou
BMC Biol. 2022; 20: 126. Published online 2022 Jun 2. doi: 10.1186/s12915-022-01332-0
PMCID:
PMC9161523
AbstractArticlePDF–10M
3.
Characterization of a novel pesticide transporter and P-glycoprotein orthologues in Drosophila melanogaster
Shane Denecke, Hằng Ngọc Bảo Lương, Venetia Koidou, Maria Kalogeridi, Rafaella Socratous, Steven Howe, Kathrin Vogelsang, Ralf Nauen, Philip Batterham, Sven Geibel, John Vontas
Proc Biol Sci. May 25, 2022; 289(1975): 20220625. Published online May 18, 2022. doi: 10.1098/rspb.2022.0625
PMCID:
PMC9114944
AbstractArticlePDF–975K
4.
Overexpression of SIRT3 Suppresses Oxidative Stress-induced Neurotoxicity and Mitochondrial Dysfunction in Dopaminergic Neuronal Cells
Shinrye Lee, Yu-Mi Jeon, Myungjin Jo, Hyung-Jun Kim
Exp Neurobiol. 2021 Oct 31; 30(5): 341–355. Published online 2021 Oct 31. doi: 10.5607/en21021
PMCID:
PMC8572659
AbstractArticlePDF–5.8M
5.
Comparative RNA-Seq analyses of Drosophila plasmatocytes reveal gene specific signatures in response to clean injury and septic injury
Elodie Ramond, Jan Paul Dudzic, Bruno Lemaitre
PLoS One. 2020; 15(6): e0235294. Published online 2020 Jun 29. doi: 10.1371/journal.pone.0235294
PMCID:
PMC7323993
AbstractArticlePDF–1.6M
6.
Transposable elements contribute to the genomic response to insecticides in Drosophila melanogaster
Judit Salces-Ortiz, Carlos Vargas-Chavez, Lain Guio, Gabriel E. Rech, Josefa González
Philos Trans R Soc Lond B Biol Sci. 2020 Mar 30; 375(1795): 20190341. Published online 2020 Feb 10. doi: 10.1098/rstb.2019.0341
PMCID:
PMC7061994
AbstractArticlePDF–1.1M
7.
CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans
Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang
Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119
PMCID:
PMC6961578
AbstractArticlePDF–3.6M
8.
An Interscholastic Network To Generate LexA Enhancer Trap Lines in Drosophila
Lutz Kockel, Catherine Griffin, Yaseen Ahmed, Lauren Fidelak, Arjun Rajan, Ethan P. Gould, Myles Haigney, Benjamin Ralston, Rex J. Tercek, Lara Galligani, Sagar Rao, Lutfi Huq, Hersh K. Bhargava, Ailis C. Dooner, Emily G. Lemmerman, Ruby F. Malusa, Tran H. Nguyen, Julie S. Chung, Sara M. Gregory, Kiyomasa M. Kuwana, Jonathan T. Regenold, Alexander Wei, Jake Ashton, Patrick Dickinson, Kate Martel, Connie Cai, Carissa Chen, Stephen Price, Jeffrey Qiao, David Shepley, Joanna Zhang, Meghana Chalasani, Khanh Nguyen, August Aalto, ByungJun Kim, Erik Tazawa-Goodchild, Amanda Sherwood, Ahmad Rahman, Sum Ying Celeste Wu, Joel Lotzkar, Serena Michaels, Hillary Aristotle, Antigone Clark, Grace Gasper, Evan Xiang, Frieda Luna Schlör, Melissa Lu, Kate Haering, Julia Friberg, Alyssa Kuwana, Jonathan Lee, Alan Liu, Emma Norton, Leena Hamad, Clara Lee, Dara Okeremi, Harry diTullio, Kat Dumoulin, Sun Yu Gordon Chi, Grayson S. Derossi, Rose E. Horowitch, Elias C. Issa, Dan T. Le, Bryce C. Morales, Ayush Noori, Justin Shao, Sophia Cho, Mai N. Hoang, Ian M. Johnson, Katherine C. Lee, Maria Lee, Elizabeth A. Madamidola, Katrina E. Schmitt, Gabriel Byan, Taeyoung Park, Jonathan Chen, Alexi Monovoukas, Madison J. Kang, Tanner McGowan, Joseph J. Walewski, Brennan Simon, Sophia J. Zu, Gregory P. Miller, Kate B. Fitzpatrick, Nicole Lantz, Elizabeth Fox, Jeanette Collette, Richard Kurtz, Chris Duncan, Ryan Palmer, Cheryl Rotondo, Eric Janicki, Townley Chisholm, Anne Rankin, Sangbin Park, Seung K. Kim
G3 (Bethesda) 2019 Jul; 9(7): 2097–2106. Published online 2019 Apr 30. doi: 10.1534/g3.119.400105
PMCID:
PMC6643891
AbstractArticlePDF–1.4M
9.
ATP-Binding Cassette (ABC) Transporter Genes Involved in Pyrethroid Resistance in the Malaria Vector Anopheles sinensis: Genome-Wide Identification, Characteristics, Phylogenetics, and Expression Profile
Qiyi He, Zhentian Yan, Fengling Si, Yong Zhou, Wenbo Fu, Bin Chen
Int J Mol Sci. 2019 Mar; 20(6): 1409. Published online 2019 Mar 20. doi: 10.3390/ijms20061409
PMCID:
PMC6471920
AbstractArticlePDF–2.3M
10.
The impact of genome variation and diet on the metabolic phenotype and microbiome composition of Drosophila melanogaster
Lisa Jehrke, Fiona A. Stewart, Andrea Droste, Mathias Beller
Sci Rep. 2018; 8: 6215. Published online 2018 Apr 18. doi: 10.1038/s41598-018-24542-5
PMCID:
PMC5906449
AbstractArticlePDF–4.5M
11.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
AbstractArticlePDF–3.2M
12.
Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster
Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira
RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117
PMCID:
PMC5689002
AbstractArticlePDF–4.0M
13.
SLC46 family transporters facilitate cytosolic innate immune recognition of monomeric peptidoglycans
Donggi Paik, Amanda Monahan, Daniel R. Caffrey, Roland Elling, William E. Goldman, Neal Silverman
J Immunol. Author manuscript; available in PMC 2018 Jul 1.
Published in final edited form as: J Immunol. 2017 Jul 1; 199(1): 263–270. Published online 2017 May 24. doi: 10.4049/jimmunol.1600409
PMCID:
PMC5513181
AbstractArticlePDF–1.5M
14.
A Genome-Wide Screen for Dendritically Localized RNAs Identifies Genes Required for Dendrite Morphogenesis
Mala Misra, Hendia Edmund, Darragh Ennis, Marissa A. Schlueter, Jessica E. Marot, Janet Tambasco, Ida Barlow, Sara Sigurbjornsdottir, Renjith Mathew, Ana Maria Vallés, Waldemar Wojciech, Siegfried Roth, Ilan Davis, Maria Leptin, Elizabeth R. Gavis
G3 (Bethesda) 2016 Aug; 6(8): 2397–2405. Published online 2016 Jun 1. doi: 10.1534/g3.116.030353
PMCID:
PMC4978894
AbstractArticlePDF–1.3M
15.
mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster
Gildas Lepennetier, Francesco Catania
G3 (Bethesda) 2016 Jun; 6(6): 1617–1626. Published online 2016 Mar 28. doi: 10.1534/g3.116.029231
PMCID:
PMC4889658
AbstractArticlePDF–1.5M
16.
SUMO-Enriched Proteome for Drosophila Innate Immune Response
Mithila Handu, Bhagyashree Kaduskar, Ramya Ravindranathan, Amarendranath Soory, Ritika Giri, Vijay Barathi Elango, Harsha Gowda, Girish S. Ratnaparkhi
G3 (Bethesda) 2015 Oct; 5(10): 2137–2154. Published online 2015 Aug 18. doi: 10.1534/g3.115.020958
PMCID:
PMC4592996
AbstractArticlePDF–2.0M
17.
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders
Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937
PMCID:
PMC4528330
AbstractArticlePDF–2.2M
18.
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data
Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929
PMCID:
PMC4528329
AbstractArticlePDF–4.9M
19.
The Drosophila Helicase Maleless (MLE) is Implicated in Functions Distinct From its Role in Dosage Compensation
Simona Cugusi, Satish Kallappagoudar, Huiping Ling, John C. Lucchesi
Mol Cell Proteomics. 2015 Jun; 14(6): 1478–1488. Published online 2015 Mar 16. doi: 10.1074/mcp.M114.040667
PMCID:
PMC4458714
AbstractArticlePDF–625K
20.
The Release 6 reference sequence of the Drosophila melanogaster genome
Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker
Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114
PMCID:
PMC4352887
AbstractArticlePDF–1022K

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