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Items: 1 to 20 of 189

1.
Defective transfer of parental histone decreases frequency of homologous recombination by increasing free histone pools in budding yeast
Srinivasu Karri, Yi Yang, Jiaqi Zhou, Quinn Dickinson, Jing Jia, Yuxin Huang, Zhiquan Wang, Haiyun Gan, Chuanhe Yu
Nucleic Acids Res. 2024 May 22; 52(9): 5138–5151. Published online 2024 Mar 30. doi: 10.1093/nar/gkae205
PMCID:
PMC11109958
AbstractArticlePDF–1.8M
2.
Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle
Michael J. O’Brien, Athar Ansari
Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.
Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968
PMCID:
PMC10872477
AbstractArticlePDF–1.7M
3.
Adaptive preservation of orphan ribosomal proteins in chaperone-dispersed condensates
Asif Ali, Rania Garde, Olivia C. Schaffer, Jared A. M. Bard, Kabir Husain, Samantha Keyport Kik, Kathleen A. Davis, Sofia Luengo-Woods, Maya G. Igarashi, D. Allan Drummond, Allison H. Squires, David Pincus
Nat Cell Biol. Author manuscript; available in PMC 2024 Feb 15.
Published in final edited form as: Nat Cell Biol. 2023 Nov; 25(11): 1691–1703. Published online 2023 Oct 16. doi: 10.1038/s41556-023-01253-2
PMCID:
PMC10868727
AbstractArticlePDF–7.0M
4.
Fast-evolving cofactors regulate the role of HEATR5 complexes in intra-Golgi trafficking
Lucas J. Marmorale, Huan Jin, Thomas G. Reidy, Brandon Palomino-Alonso, Christopher J. Zysnarski, Fatima Jordan-Javed, Sagar Lahiri, Mara C. Duncan
J Cell Biol. 2024 Mar 4; 223(3): e202309047. Published online 2024 Jan 19. doi: 10.1083/jcb.202309047
PMCID:
PMC10798858
AbstractArticlePDF–6.4M
5.
The social and structural architecture of the yeast protein interactome
André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann
Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5
PMCID:
PMC10700138
AbstractArticlePDF–20M
6.
The N-terminus of Spt16 anchors FACT to MCM2–7 for parental histone recycling
Xuezheng Wang, Yuantao Tang, Jiawei Xu, He Leng, Guojun Shi, Zaifeng Hu, Jiale Wu, Yuwen Xiu, Jianxun Feng, Qing Li
Nucleic Acids Res. 2023 Nov 27; 51(21): 11549–11567. Published online 2023 Oct 18. doi: 10.1093/nar/gkad846
PMCID:
PMC10681723
AbstractArticlePDF–6.5M
7.
Nucleosome retention by histone chaperones and remodelers occludes pervasive DNA–protein binding
Felix Jonas, Matan Vidavski, Eli Benuck, Naama Barkai, Gilad Yaakov
Nucleic Acids Res. 2023 Sep 8; 51(16): 8496–8513. Published online 2023 Jul 26. doi: 10.1093/nar/gkad615
PMCID:
PMC10484674
AbstractArticlePDF–4.7M
8.
The histone H2B Arg95 residue efficiently recruits the transcription factor Spt16 to mediate Ste5 expression of the pheromone response pathway
Abdallah Alhaj Sulaiman, Reem Ali, Dindial Ramotar
Sci Rep. 2023; 13: 10189. Published online 2023 Jun 22. doi: 10.1038/s41598-023-37339-y
PMCID:
PMC10287706
AbstractArticlePDF–1.9M
9.
A proteomic screen of Ty1 integrase partners identifies the protein kinase CK2 as a regulator of Ty1 retrotransposition
Anastasia Barkova, Indranil Adhya, Christine Conesa, Amna Asif-Laidin, Amandine Bonnet, Elise Rabut, Carine Chagneau, Pascale Lesage, Joël Acker
Mob DNA. 2022; 13: 26. Published online 2022 Nov 18. doi: 10.1186/s13100-022-00284-0
PMCID:
PMC9673352
AbstractArticlePDF–2.6M
10.
Dominant effects of the histone mutant H3-L61R on Spt16-gene interactions in budding yeast
Alex Pablo-Kaiser, McKenzie G. Tucker, Grace A. Turner, Elijah G. Dilday, Avery G. Olmstead, Caroline L. Tackett, Andrea A. Duina
Epigenetics. 2022; 17(13): 2347–2355. Published online 2022 Sep 8. doi: 10.1080/15592294.2022.2121073
PMCID:
PMC9665134
AbstractArticlePDF–767K
11.
Hmo1 Protein Affects the Nucleosome Structure and Supports the Nucleosome Reorganization Activity of Yeast FACT
Daria K. Malinina, Anastasiia L. Sivkina, Anna N. Korovina, Laura L. McCullough, Tim Formosa, Mikhail P. Kirpichnikov, Vasily M. Studitsky, Alexey V. Feofanov
Cells. 2022 Oct; 11(19): 2931. Published online 2022 Sep 20. doi: 10.3390/cells11192931
PMCID:
PMC9564320
AbstractArticlePDF–2.6M
12.
Suppressor mutations that make the essential transcription factor Spn1/Iws1 dispensable in Saccharomyces cerevisiae
Francheska López-Rivera, James Chuang, Dan Spatt, Rajaraman Gopalakrishnan, Fred Winston
Genetics. 2022 Oct; 222(2): iyac125. Published online 2022 Aug 17. doi: 10.1093/genetics/iyac125
PMCID:
PMC9526074
AbstractArticlePDF–1.0M
13.
Mediator recruits the cohesin loader Scc2 to RNA Pol II-transcribed genes and promotes sister chromatid cohesion
Mark Mattingly, Chris Seidel, Sofía Muñoz, Yan Hao, Ying Zhang, Zhihui Wen, Laurence Florens, Frank Uhlmann, Jennifer L. Gerton
Curr Biol. 2022 Jul 11; 32(13): 2884–2896.e6. doi: 10.1016/j.cub.2022.05.019
PMCID:
PMC9286023
AbstractArticle
14.
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources
Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry
Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224
PMCID:
PMC9209811
AbstractArticlePDF–818K
15.
FACT is recruited to the +1 nucleosome of transcribed genes and spreads in a Chd1-dependent manner
Célia Jeronimo, Andrew Angel, Vu Q. Nguyen, Jee Min Kim, Christian Poitras, Elie Lambert, Pierre Collin, Jane Mellor, Carl Wu, François Robert
Mol Cell. Author manuscript; available in PMC 2022 Sep 2.
Published in final edited form as: Mol Cell. 2021 Sep 2; 81(17): 3542–3559.e11. Published online 2021 Aug 10. doi: 10.1016/j.molcel.2021.07.010
PMCID:
PMC9149603
AbstractArticlePDF–3.0M
16.
Identification of 14-3-3 Proteins, Polo kinase, and RNA-binding protein Pes4 as Key Regulators of Meiotic Commitment in Budding Yeast
Janardan N. Gavade, Chris M. Puccia, S. Grace Herod, Jonathan C. Trinidad, Luke E. Berchowitz, Soni Lacefield
Curr Biol. Author manuscript; available in PMC 2023 Apr 11.
Published in final edited form as: Curr Biol. 2022 Apr 11; 32(7): 1534–1547.e9. Published online 2022 Mar 2. doi: 10.1016/j.cub.2022.02.022
PMCID:
PMC9007917
AbstractArticlePDF–2.2M
17.
Spt5 histone binding activity preserves chromatin during transcription by RNA polymerase II
Cecile Evrin, Albert Serra‐Cardona, Shoufu Duan, Progya P Mukherjee, Zhiguo Zhang, Karim P M Labib
EMBO J. 2022 Mar 1; 41(5): e109783. Published online 2022 Feb 1. doi: 10.15252/embj.2021109783
PMCID:
PMC8886531
AbstractArticlePDF–1.4M
18.
The fork protection complex recruits FACT to reorganize nucleosomes during replication
Barbara Safaric, Erika Chacin, Matthias J Scherr, Lional Rajappa, Christian Gebhardt, Christoph F Kurat, Thorben Cordes, Karl E Duderstadt
Nucleic Acids Res. 2022 Feb 22; 50(3): 1317–1334. Published online 2022 Jan 21. doi: 10.1093/nar/gkac005
PMCID:
PMC8860610
AbstractArticlePDF–5.7M
19.
Oxidative stress protein Oxr1 promotes V‐ATPase holoenzyme disassembly in catalytic activity‐independent manner
Md. Murad Khan, Seowon Lee, Sergio Couoh‐Cardel, Rebecca A Oot, Hyunmin Kim, Stephan Wilkens, Soung‐Hun Roh
EMBO J. 2022 Feb 1; 41(3): e109360. Published online 2021 Dec 17. doi: 10.15252/embj.2021109360
PMCID:
PMC8804929
AbstractArticlePDF–5.5M
20.
Systematic Screening of Penetratin’s Protein Targets by Yeast Proteome Microarrays
Pramod Shah, Chien-Sheng Chen
Int J Mol Sci. 2022 Jan; 23(2): 712. Published online 2022 Jan 10. doi: 10.3390/ijms23020712
PMCID:
PMC8775591
AbstractArticlePDF–5.0M

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