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Items: 1 to 20 of 67

1.
Characterization of the dimeric CMG/pre-initiation complex and its transition into DNA replication forks
Lu Liu, Yue Zhang, Jingjing Zhang, Jian-Hua Wang, Qinhong Cao, Zhen Li, Judith L. Campbell, Meng-Qiu Dong, Huiqiang Lou
Cell Mol Life Sci. 2020 Aug; 77(15): 3041–3058. Published online 2019 Nov 15. doi: 10.1007/s00018-019-03333-9
PMCID:
PMC11104849
AbstractArticlePDF–9.1M
2.
Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle
Michael J. O’Brien, Athar Ansari
Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.
Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968
PMCID:
PMC10872477
AbstractArticlePDF–1.7M
3.
The social and structural architecture of the yeast protein interactome
André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann
Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5
PMCID:
PMC10700138
AbstractArticlePDF–20M
4.
Synergism between CMG helicase and leading strand DNA polymerase at replication fork
Zhichun Xu, Jianrong Feng, Daqi Yu, Yunjing Huo, Xiaohui Ma, Wai Hei Lam, Zheng Liu, Xiang David Li, Toyotaka Ishibashi, Shangyu Dang, Yuanliang Zhai
Nat Commun. 2023; 14: 5849. Published online 2023 Sep 20. doi: 10.1038/s41467-023-41506-0
PMCID:
PMC10511561
AbstractArticlePDF–5.3M
5.
A systematic proximity ligation approach to studying protein‐substrate specificity identifies the substrate spectrum of the Ssh1 translocon
Nir Cohen, Naama Aviram, Maya Schuldiner
EMBO J. 2023 Jun; 42(11): e113385. Published online 2023 Apr 19. doi: 10.15252/embj.2022113385
PMCID:
PMC10233368
AbstractArticlePDF–1.2M
6.
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources
Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry
Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224
PMCID:
PMC9209811
AbstractArticlePDF–818K
7.
Recombination and Pol ζ Rescue Defective DNA Replication upon Impaired CMG Helicase—Pol ε Interaction
Milena Denkiewicz-Kruk, Malgorzata Jedrychowska, Shizuko Endo, Hiroyuki Araki, Piotr Jonczyk, Michal Dmowski, Iwona J. Fijalkowska
Int J Mol Sci. 2020 Dec; 21(24): 9484. Published online 2020 Dec 13. doi: 10.3390/ijms21249484
PMCID:
PMC7762974
AbstractArticlePDF–2.8M
8.
Comprehensive Synthetic Genetic Array Analysis of Alleles That Interact with Mutation of the Saccharomyces cerevisiae RecQ Helicases Hrq1 and Sgs1
Elsbeth Sanders, Phoebe A. Nguyen, Cody M. Rogers, Matthew L. Bochman
G3 (Bethesda) 2020 Dec; 10(12): 4359–4368. Published online 2020 Oct 28. doi: 10.1534/g3.120.401709
PMCID:
PMC7718751
AbstractArticlePDF–1.2M
9.
Ctf18-RFC and DNA Pol ϵ form a stable leading strand polymerase/clamp loader complex required for normal and perturbed DNA replication
Katy Stokes, Alicja Winczura, Boyuan Song, Giacomo De Piccoli, Daniel B Grabarczyk
Nucleic Acids Res. 2020 Aug 20; 48(14): 8128–8145. Published online 2020 Jun 25. doi: 10.1093/nar/gkaa541
PMCID:
PMC7641331
AbstractArticlePDF–9.1M
10.
CMG helicase disassembly is controlled by replication fork DNA, replisome components and a ubiquitin threshold
Tom D Deegan, Progya P Mukherjee, Ryo Fujisawa, Cristian Polo Rivera, Karim Labib
eLife. 2020; 9: e60371. Published online 2020 Aug 17. doi: 10.7554/eLife.60371
PMCID:
PMC7462611
AbstractArticlePDF–4.9M
11.
A genetic interaction map centered on cohesin reveals auxiliary factors involved in sister chromatid cohesion in S. cerevisiae
Su Ming Sun, Amandine Batté, Mireille Elmer, Sophie C. van der Horst, Tibor van Welsem, Gordon Bean, Trey Ideker, Fred van Leeuwen, Haico van Attikum
J Cell Sci. 2020 May 15; 133(10): jcs237628. Published online 2020 May 22. doi: 10.1242/jcs.237628
PMCID:
PMC7325435
AbstractArticle
12.
Structure of the polymerase ε holoenzyme and atomic model of the leading strand replisome
Zuanning Yuan, Roxana Georgescu, Grant D. Schauer, Michael E. O’Donnell, Huilin Li
Nat Commun. 2020; 11: 3156. Published online 2020 Jun 22. doi: 10.1038/s41467-020-16910-5
PMCID:
PMC7308368
AbstractArticlePDF–3.2M
13.
DNA polymerase ε relies on a unique domain for efficient replisome assembly and strand synthesis
Xiangzhou Meng, Lei Wei, Sujan Devbhandari, Tuo Zhang, Jenny Xiang, Dirk Remus, Xiaolan Zhao
Nat Commun. 2020; 11: 2437. Published online 2020 May 15. doi: 10.1038/s41467-020-16095-x
PMCID:
PMC7228970
AbstractArticlePDF–2.7M
14.
Sen1 Is Recruited to Replication Forks via Ctf4 and Mrc1 and Promotes Genome Stability
Rowin Appanah, Emma Claire Lones, Umberto Aiello, Domenico Libri, Giacomo De Piccoli
Cell Rep. 2020 Feb 18; 30(7): 2094–2105.e9. Published online 2020 Feb 18. doi: 10.1016/j.celrep.2020.01.087
PMCID:
PMC7034062
AbstractArticle
15.
Sumoylation of the DNA polymerase ε by the Smc5/6 complex contributes to DNA replication
Xiangzhou Meng, Lei Wei, Xiao P. Peng, Xiaolan Zhao
PLoS Genet. 2019 Nov; 15(11): e1008426. Published online 2019 Nov 25. doi: 10.1371/journal.pgen.1008426
PMCID:
PMC6876774
AbstractArticlePDF–2.3M
16.
The S phase checkpoint promotes the Smc5/6 complex dependent SUMOylation of Pol2, the catalytic subunit of DNA polymerase ε
Alicja Winczura, Rowin Appanah, Michael H. Tatham, Ronald T. Hay, Giacomo De Piccoli
PLoS Genet. 2019 Nov; 15(11): e1008427. Published online 2019 Nov 25. doi: 10.1371/journal.pgen.1008427
PMCID:
PMC6876773
AbstractArticlePDF–2.8M
17.
Structural evidence for an essential Fe–S cluster in the catalytic core domain of DNA polymerase ϵ
Josy ter Beek, Vimal Parkash, Göran O Bylund, Pia Osterman, A Elisabeth Sauer-Eriksson, Erik Johansson
Nucleic Acids Res. 2019 Jun 20; 47(11): 5712–5722. Published online 2019 Apr 10. doi: 10.1093/nar/gkz248
PMCID:
PMC6582351
AbstractArticlePDF–10M
18.
Saccharomyces cerevisiae Gle2/Rae1 is involved in septin organization, essential for cell cycle progression
Gesa Zander, Wilfried Kramer, Anika Seel, Heike Krebber
Yeast. 2017 Nov; 34(11): 459–470. Published online 2017 Sep 28. doi: 10.1002/yea.3249
PMCID:
PMC6472880
AbstractArticlePDF–1.9M
19.
Multiple signaling kinases target Mrc1 to prevent genomic instability triggered by transcription-replication conflicts
Alba Duch, Berta Canal, Sonia I. Barroso, María García-Rubio, Gerhard Seisenbacher, Andrés Aguilera, Eulàlia de Nadal, Francesc Posas
Nat Commun. 2018; 9: 379. Published online 2018 Jan 25. doi: 10.1038/s41467-017-02756-x
PMCID:
PMC5785523
AbstractArticlePDF–2.4M
20.
Genome-Wide Mapping of Decay Factor–mRNA Interactions in Yeast Identifies Nutrient-Responsive Transcripts as Targets of the Deadenylase Ccr4
Jason E. Miller, Liye Zhang, Haoyang Jiang, Yunfei Li, B. Franklin Pugh, Joseph C. Reese
G3 (Bethesda) 2018 Jan; 8(1): 315–330. Published online 2017 Nov 20. doi: 10.1534/g3.117.300415
PMCID:
PMC5765359
AbstractArticlePDF–2.2M

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