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Select item 108724771.

Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle

Michael J. O’Brien, Athar Ansari

Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.

Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968

PMCID:: PMC10872477

Article PDF–1.7M

Select item 107001382.

The social and structural architecture of the yeast protein interactome

André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann

Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5

PMCID:: PMC10700138

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Select item 106416233.

Turnover and bypass of p21-activated kinase during Cdc42-dependent MAPK signaling in yeast

Beatriz González, Mahnoosh Mirzaei, Sukanya Basu, Atindra N. Pujari, Matthew D. Vandermeulen, Aditi Prabhakar, Paul J. Cullen

J Biol Chem. 2023 Nov; 299(11): 105297. Published online 2023 Sep 28. doi: 10.1016/j.jbc.2023.105297

PMCID:: PMC10641623

Article PDF–2.6M

Select item 105211374.

Checkpoint kinase interaction with DNA polymerase alpha regulates replication progression during stress

Andreas Hadjicharalambous, Alex J. Whale, Geylani Can, J. Mark Skehel, Jonathan M. Houseley, Philip Zegerman

Version 1. Wellcome Open Res. 2023; 8: 327. Published online 2023 Jul 26. doi: 10.12688/wellcomeopenres.19617.1

PMCID:: PMC10521137

Article PDF–4.0M

Select item 102977005.

The Hsp90 molecular chaperone governs client proteins by targeting intrinsically disordered regions

Janhavi A. Kolhe, Neethu L. Babu, Brian C. Freeman

Mol Cell. Author manuscript; available in PMC 2024 Jun 15.

Published in final edited form as: Mol Cell. 2023 Jun 15; 83(12): 2035–2044.e7. Published online 2023 Jun 8. doi: 10.1016/j.molcel.2023.05.021

PMCID:: PMC10297700

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Select item 98363486.

A synthetic genetic array screen for interactions with the RNA helicase DED1 during cell stress in budding yeast

Sara B Carey, Hannah M List, Ashwin Siby, Paolo Guerra, Timothy A Bolger

G3 (Bethesda) 2023 Jan; 13(1): jkac296. Published online 2022 Nov 21. doi: 10.1093/g3journal/jkac296

PMCID:: PMC9836348

Article PDF–857K

Select item 96456277.

Ydj1 interaction at nucleotide-binding-domain of yeast Ssa1 impacts Hsp90 collaboration and client maturation

Deepika Gaur, Navinder Kumar, Abhirupa Ghosh, Prashant Singh, Pradeep Kumar, Jyoti Guleria, Satinderdeep Kaur, Nikhil Malik, Sudipto Saha, Thomas Nystrom, Deepak Sharma

PLoS Genet. 2022 Nov; 18(11): e1010442. Published online 2022 Nov 9. doi: 10.1371/journal.pgen.1010442

PMCID:: PMC9645627

Article PDF–2.7M

Select item 96296218.

Comprehensive characterization of the Hsp70 interactome reveals novel client proteins and interactions mediated by posttranslational modifications

Nitika, Bo Zheng, Linhao Ruan, Jake T. Kline, Siddhi Omkar, Jacek Sikora, Mara Texeira Torres, Yuhao Wang, Jade E. Takakuwa, Romain Huguet, Cinzia Klemm, Verónica A. Segarra, Matthew J. Winters, Peter M. Pryciak, Peter H. Thorpe, Kazuo Tatebayashi, Rong Li, Luca Fornelli, Andrew W. Truman

PLoS Biol. 2022 Oct; 20(10): e3001839. Published online 2022 Oct 21. doi: 10.1371/journal.pbio.3001839

PMCID:: PMC9629621

Article PDF–3.4M

Select item 92098119.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Article PDF–818K

Select item 837305510.

Core promoter activity contributes to chromatin-based regulation of internal cryptic promoters

Bo Bae Lee, Hyeonju Woo, Min Kyung Lee, SeoJung Youn, Sumin Lee, Jae-Seok Roe, Soo Young Lee, TaeSoo Kim

Nucleic Acids Res. 2021 Aug 20; 49(14): 8097–8109. Published online 2021 Jul 28. doi: 10.1093/nar/gkab639

PMCID:: PMC8373055

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Select item 779375411.

Activation of a Mitogen-Activated Protein Kinase Hog1 by DNA Damaging Agent Methyl Methanesulfonate in Yeast

Shan Huang, David Zhang, Fangli Weng, Yuqi Wang

Front Mol Biosci. 2020; 7: 581095. Published online 2020 Dec 11. doi: 10.3389/fmolb.2020.581095

PMCID:: PMC7793754

Article PDF–823K

Select item 718589112.

Functions for Cdc42p BEM adaptors in regulating a differentiation-type MAP kinase pathway

Sukanya Basu, Beatriz González, Boyang Li, Garrett Kimble, Keith G. Kozminski, Paul J. Cullen

Mol Biol Cell. 2020 Mar 15; 31(6): 491–510. doi: 10.1091/mbc.E19-08-0441

PMCID:: PMC7185891

Article PDF–2.1M

Select item 717484613.

Regulation of intrinsic polarity establishment by a differentiation-type MAPK pathway in S. cerevisiae

Aditi Prabhakar, Jacky Chow, Alan J. Siegel, Paul J. Cullen

J Cell Sci. 2020 Apr 1; 133(7): jcs241513. Published online 2020 Apr 14. doi: 10.1242/jcs.241513

PMCID:: PMC7174846

Article

Select item 714494214.

A genetic analysis reveals novel histone residues required for transcriptional reprogramming upon stress

Cristina Viéitez, Gerard Martínez-Cebrián, Carme Solé, René Böttcher, Clement M Potel, Mikhail M Savitski, Sara Onnebo, Marc Fabregat, Ali Shilatifard, Francesc Posas, Eulàlia de Nadal

Nucleic Acids Res. 2020 Apr 17; 48(7): 3455–3475. Published online 2020 Feb 17. doi: 10.1093/nar/gkaa081

PMCID:: PMC7144942

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Select item 706580515.

Multi-kinase control of environmental stress responsive transcription

Kieran Mace, Joanna Krakowiak, Hana El-Samad, David Pincus

PLoS One. 2020; 15(3): e0230246. Published online 2020 Mar 11. doi: 10.1371/journal.pone.0230246

PMCID:: PMC7065805

Article PDF–4.4M

Select item 704981416.

Osmostress enhances activating phosphorylation of Hog1 MAP kinase by mono‐phosphorylated Pbs2 MAP2K

Kazuo Tatebayashi, Katsuyoshi Yamamoto, Taichiro Tomida, Akiko Nishimura, Tomomi Takayama, Masaaki Oyama, Hiroko Kozuka‐Hata, Satomi Adachi‐Akahane, Yuji Tokunaga, Haruo Saito

EMBO J. 2020 Mar 2; 39(5): e103444. Published online 2020 Feb 3. doi: 10.15252/embj.2019103444

PMCID:: PMC7049814

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Select item 666992217.

Endosome and Golgi‐associated degradation (EGAD) of membrane proteins regulates sphingolipid metabolism

Oliver Schmidt, Yannick Weyer, Verena Baumann, Michael A Widerin, Sebastian Eising, Mihaela Angelova, Alexander Schleiffer, Leopold Kremser, Herbert Lindner, Matthias Peter, Florian Fröhlich, David Teis

EMBO J. 2019 Aug 1; 38(15): e101433. Published online 2019 May 27. doi: 10.15252/embj.2018101433

PMCID:: PMC6669922

Article PDF–2.8M

Select item 661571018.

The nucleotide sequence of Saccharomyces cerevisiae chromosome XII

M. Johnston, L. Hillier, L. Riles, other members of the Genome Sequencing Center, K. Albermann, B. André, W. Ansorge, V. Benes, M. Brückner, H. Delius, E. Dubois, A. Düsterhöft, K.-D. Entian, M. Floeth, A. Goffeau, U. Hebling, K. Heumann, D. Heuss-Neitzel, H. Hilbert, F. Hilger, K. Kleine, P. Kötter, E. J. Louis, F. Messenguy, H. W. Mewes, T. Miosga, D. Möstl, S. Müller-Auer, U. Nentwich, B. Obermaier, E. Piravandi, T. M. Pohl, D. Portetelle, B. Purnelle, S. Rechmann, M. Rieger, M. Rinke, M. Rose, M. Scharfe, B. Scherens, P. Scholler, C. Schwager, S. Schwarz, A. P. Underwood, L. A. Urrestarazu, M. Vandenbol, P. Verhasselt, F. Vierendeels, M Voet, G. Volckaert, H. Voss, R. Wambutt, E. Wedler, H. Wedler, F. K. Zimmermann, A. Zollner, J. Hani, J. D. Hoheisel

Nature. Author manuscript; available in PMC 2019 Jul 9.

Published in final edited form as: Nature. 1997 May 29; 387(6632 Suppl): 87–90.

PMCID:: PMC6615710

Article PDF–424K

Select item 621627719.

A role for Mog1 in H2Bub1 and H3K4me3 regulation affecting RNAPII transcription and mRNA export

Paula Oliete‐Calvo, Joan Serrano‐Quílez, Carme Nuño‐Cabanes, María E Pérez‐Martínez, Luis M Soares, Bernhard Dichtl, Stephen Buratowski, José E Pérez‐Ortín, Susana Rodríguez‐Navarro

EMBO Rep. 2018 Nov; 19(11): e45992. Published online 2018 Sep 24. doi: 10.15252/embr.201845992

PMCID:: PMC6216277

Article PDF–1.7M

Select item 608582020.

Intracellular mechanism by which arsenite activates the yeast stress MAPK Hog1

Jongmin Lee, David E. Levin

Mol Biol Cell. 2018 Aug 1; 29(15): 1904–1915. doi: 10.1091/mbc.E18-03-0185

PMCID:: PMC6085820

Article PDF–1.2M

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