PMC Links for GEO Profiles (Select 23982646) - PMC

Select item 115219061.

Arid3c identifies an uncharacterized subpopulation of V2 interneurons during embryonic spinal cord development

Estelle Renaux, Charlotte Baudouin, Olivier Schakman, Ondine Gay, Manon Martin, Damien Marchese, Younès Achouri, René Rezsohazy, Françoise Gofflot, Frédéric Clotman

Front Cell Neurosci. 2024; 18: 1466056. Published online 2024 Oct 16. doi: 10.3389/fncel.2024.1466056

PMCID:: PMC11521906

Abstract Article PDF–3.6M

Select item 114526822.

Concerted transcriptional regulation of the morphogenesis of hypothalamic neurons by ONECUT3

Maja Zupančič, Erik Keimpema, Evgenii O. Tretiakov, Stephanie J. Eder, Itamar Lev, Lukas Englmaier, Pradeep Bhandari, Simone A. Fietz, Wolfgang Härtig, Estelle Renaux, Andreas Villunger, Tomas Hökfelt, Manuel Zimmer, Frédéric Clotman, Tibor Harkany

Nat Commun. 2024; 15: 8631. Published online 2024 Oct 5. doi: 10.1038/s41467-024-52762-z

PMCID:: PMC11452682

Abstract Article PDF–6.8M

Select item 83132393.

Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development

Francesco Bedogni, Robert F. Hevner

Front Mol Neurosci. 2021; 14: 686034. Published online 2021 Jul 12. doi: 10.3389/fnmol.2021.686034

PMCID:: PMC8313239

Abstract Article PDF–1.6M

Select item 72927334.

Molecular design of hypothalamus development

Roman A. Romanov, Evgenii O. Tretiakov, Maria Eleni Kastriti, Maja Zupancic, Martin Häring, Solomiia Korchynska, Konstantin Popadin, Marco Benevento, Patrick Rebernik, Francois Lallemend, Katsuhiko Nishimori, Frédéric Clotman, William D. Andrews, John G. Parnavelas, Matthias Farlik, Christoph Bock, Igor Adameyko, Tomas Hökfelt, Erik Keimpema, Tibor Harkany

Nature. Author manuscript; available in PMC 2020 Nov 6.

Published in final edited form as: Nature. 2020 Jun; 582(7811): 246–252. Published online 2020 May 6. doi: 10.1038/s41586-020-2266-0

PMCID:: PMC7292733

Abstract Article PDF–9.9M

Select item 69766255.

Onecut-dependent Nkx6.2 transcription factor expression is required for proper formation and activity of spinal locomotor circuits

Mathilde Toch, Audrey Harris, Olivier Schakman, Elena Kondratskaya, Jean-Luc Boulland, Nicolas Dauguet, Stéphanie Debrulle, Charlotte Baudouin, Maria Hidalgo-Figueroa, Xiuqian Mu, Alexander Gow, Joel C. Glover, Fadel Tissir, Frédéric Clotman

Sci Rep. 2020; 10: 996. Published online 2020 Jan 22. doi: 10.1038/s41598-020-57945-4

Correction in:: Sci Rep. 2020; 10: 13531.

PMCID:: PMC6976625

Abstract Article PDF–4.4M

Select item 65613146.

Onecut Factors and Pou2f2 Regulate the Distribution of V2 Interneurons in the Mouse Developing Spinal Cord

Audrey Harris, Gauhar Masgutova, Amandine Collin, Mathilde Toch, Maria Hidalgo-Figueroa, Benvenuto Jacob, Lynn M. Corcoran, Cédric Francius, Frédéric Clotman

Front Cell Neurosci. 2019; 13: 184. Published online 2019 Jun 5. doi: 10.3389/fncel.2019.00184

PMCID:: PMC6561314

Abstract Article PDF–12M

Select item 54451197.

The Onecut Transcription Factors Regulate Differentiation and Distribution of Dorsal Interneurons during Spinal Cord Development

Karolina U. Kabayiza, Gauhar Masgutova, Audrey Harris, Vincent Rucchin, Benvenuto Jacob, Frédéric Clotman

Front Mol Neurosci. 2017; 10: 157. Published online 2017 May 26. doi: 10.3389/fnmol.2017.00157

PMCID:: PMC5445119

Abstract Article PDF–7.2M

Select item 48895408.

Two pairs of ON and OFF retinal ganglion cells are defined by intersectional patterns of transcription factor expression

David L. Rousso, Mu Qiao, Ruth D. Kagan, Masahito Yamagata, Richard D. Palmiter, Joshua R. Sanes

Cell Rep. Author manuscript; available in PMC 2016 Jun 2.

Published in final edited form as: Cell Rep. 2016 May 31; 15(9): 1930–1944. Published online 2016 May 19. doi: 10.1016/j.celrep.2016.04.069

PMCID:: PMC4889540

Abstract Article PDF–2.8M

Select item 43815289.

Single-cell-level spatial gene expression in the embryonic neural differentiation niche

Yi Huang, Xiaoming Yu, Na Sun, Nan Qiao, Yaqiang Cao, Jerome D. Boyd-Kirkup, Qin Shen, Jing-Dong J. Han

Genome Res. 2015 Apr; 25(4): 570–581. doi: 10.1101/gr.181966.114

PMCID:: PMC4381528

Abstract Article PDF–2.5M

Select item 431955910.

A high resolution spatiotemporal atlas of gene expression of the developing mouse brain

Carol L. Thompson, Lydia Ng, Vilas Menon, Salvador Martinez, Chang-Kyu Lee, Katie Glattfelder, Susan M. Sunkin, Alex Henry, Christopher Lau, Chinh Dang, Raquel Garcia-Lopez, Almudena Martinez-Ferre, Ana Pombero, John L.R. Rubenstein, Wayne B. Wakeman, John Hohmann, Nick Dee, Andrew J. Sodt, Rob Young, Kimberly Smith, Thuc-Nghi Nguyen, Jolene Kidney, Leonard Kuan, Andreas Jeromin, Ajamete Kaykas, Jeremy Miller, Damon Page, Geri Orta, Amy Bernard, Zackery Riley, Simon Smith, Paul Wohnoutka, Mike Hawrylycz, Luis Puelles, Allan R. Jones

Neuron. Author manuscript; available in PMC 2015 Jul 16.

Published in final edited form as: Neuron. 2014 Jul 16; 83(2): 309–323. Published online 2014 Jun 19. doi: 10.1016/j.neuron.2014.05.033

PMCID:: PMC4319559

Abstract Article PDF–3.0M

Select item 407425111.

Onecut transcription factors act upstream of Isl1 to regulate spinal motoneuron diversification

Agnès Roy, Cédric Francius, David L. Rousso, Eve Seuntjens, Joke Debruyn, Georg Luxenhofer, Andrea B. Huber, Danny Huylebroeck, Bennett G. Novitch, Frédéric Clotman

Development. 2012 Sep 1; 139(17): 3109–3119. doi: 10.1242/dev.078501

PMCID:: PMC4074251

Abstract Article

Select item 350722912.

Genome wide expression profiling of the mesodiencephalic region identifies novel factors involved in early and late dopaminergic development

Koushik Chakrabarty, Lars Von Oerthel, Anita Hellemons, Frédéric Clotman, Agnès Espana, Marian Groot Koerkamp, Frank C. P. Holstege, R. Jeroen Pasterkamp, Marten P. Smidt

Biol Open. 2012 Aug 15; 1(8): 693–704. Published online 2012 May 17. doi: 10.1242/bio.20121230

PMCID:: PMC3507229

Abstract Article PDF–1.5M

Select item 317805913.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 302253414.

A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo

Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio

PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582