PMC Links for GEO Profiles (Select 240803) - PMC

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 77970784.

Pseudouridine-mediated translation control of mRNA by methionine aminoacyl tRNA synthetase

Ofri Levi, Yoav S Arava

Nucleic Acids Res. 2021 Jan 11; 49(1): 432–443. Published online 2020 Dec 10. doi: 10.1093/nar/gkaa1178

PMCID:: PMC7797078

Abstract Article PDF–3.3M

Select item 68001835.

The Conserved CDC Motif in the Yeast Iron Regulator Aft2 Mediates Iron-Sulfur Cluster Exchange and Protein-Protein Interactions with Grx3 and Bol2

Haoran Li, Caryn E. Outten

J Biol Inorg Chem. Author manuscript; available in PMC 2020 Sep 6.

Published in final edited form as: J Biol Inorg Chem. 2019 Sep; 24(6): 809–815. Published online 2019 Sep 6. doi: 10.1007/s00775-019-01705-x

PMCID:: PMC6800183

Abstract Article PDF–853K

Select item 57653596.

Genome-Wide Mapping of Decay Factor–mRNA Interactions in Yeast Identifies Nutrient-Responsive Transcripts as Targets of the Deadenylase Ccr4

Jason E. Miller, Liye Zhang, Haoyang Jiang, Yunfei Li, B. Franklin Pugh, Joseph C. Reese

G3 (Bethesda) 2018 Jan; 8(1): 315–330. Published online 2017 Nov 20. doi: 10.1534/g3.117.300415

PMCID:: PMC5765359

Abstract Article PDF–2.2M

Select item 56618857.

A global interaction network maps a wiring diagram of cellular function

Michael Costanzo, Benjamin VanderSluis, Elizabeth N. Koch, Anastasia Baryshnikova, Carles Pons, Guihong Tan, Wen Wang, Matej Usaj, Julia Hanchard, Susan D. Lee, Vicent Pelechano, Erin B. Styles, Maximilian Billmann, Jolanda van Leeuwen, Nydia van Dyk, Zhen-Yuan Lin, Elena Kuzmin, Justin Nelson, Jeff S. Piotrowski, Tharan Srikumar, Sondra Bahr, Yiqun Chen, Raamesh Deshpande, Christoph F. Kurat, Sheena C. Li, Zhijian Li, Mojca Mattiazzi Usaj, Hiroki Okada, Natasha Pascoe, Bryan-Joseph San Luis, Sara Sharifpoor, Emira Shuteriqi, Scott W. Simpkins, Jamie Snider, Harsha Garadi Suresh, Yizhao Tan, Hongwei Zhu, Noel Malod-Dognin, Vuk Janjic, Natasa Przulj, Olga G. Troyanskaya, Igor Stagljar, Tian Xia, Yoshikazu Ohya, Anne-Claude Gingras, Brian Raught, Michael Boutros, Lars M. Steinmetz, Claire L. Moore, Adam P. Rosebrock, Amy A. Caudy, Chad L. Myers, Brenda Andrews, Charles Boone

Science. Author manuscript; available in PMC 2017 Oct 30.

Published in final edited form as: Science. 2016 Sep 23; 353(6306): aaf1420. doi: 10.1126/science.aaf1420

PMCID:: PMC5661885

Abstract Article PDF–2.6M

Select item 56480328.

Architecture and dynamics of overlapped RNA regulatory networks

Christopher P. Lapointe, Melanie A. Preston, Daniel Wilinski, Harriet A.J. Saunders, Zachary T. Campbell, Marvin Wickens

RNA. 2017 Nov; 23(11): 1636–1647. doi: 10.1261/rna.062687.117

PMCID:: PMC5648032

Abstract Article PDF–6.6M

Select item 55951469.

Schizosaccharomyces pombe Grx4 Regulates the Transcriptional Repressor Php4 via [2Fe-2S] Cluster Binding

Adrienne C. Dlouhy, Jude Beaudoin, Simon Labbé, Caryn E. Outten

Metallomics. Author manuscript; available in PMC 2018 Aug 16.

Published in final edited form as: Metallomics. 2017 Aug 16; 9(8): 1096–1105. doi: 10.1039/c7mt00144d

PMCID:: PMC5595146

Abstract Article PDF–715K

Select item 505508310.

Functional Metabolomics Describes the Yeast Biosynthetic Regulome

Michael Mülleder, Enrica Calvani, Mohammad Tauqeer Alam, Richard Kangda Wang, Florian Eckerstorfer, Aleksej Zelezniak, Markus Ralser

Cell. 2016 Oct 6; 167(2): 553–565.e12. doi: 10.1016/j.cell.2016.09.007

PMCID:: PMC5055083

Abstract Article PDF–3.9M

Select item 502647311.

A conserved quality-control pathway that mediates degradation of unassembled ribosomal proteins

Min-Kyung Sung, Tanya R Porras-Yakushi, Justin M Reitsma, Ferdinand M Huber, Michael J Sweredoski, André Hoelz, Sonja Hess, Raymond J Deshaies

eLife. 2016; 5: e19105. Published online 2016 Aug 23. doi: 10.7554/eLife.19105

PMCID:: PMC5026473

Abstract Article PDF–4.2M

Select item 501455012.

Mitochondrial Bol1 and Bol3 function as assembly factors for specific iron-sulfur proteins

Marta A Uzarska, Veronica Nasta, Benjamin D Weiler, Farah Spantgar, Simone Ciofi-Baffoni, Maria Rosaria Saviello, Leonardo Gonnelli, Ulrich Mühlenhoff, Lucia Banci, Roland Lill

eLife. 2016; 5: e16673. Published online 2016 Aug 17. doi: 10.7554/eLife.16673

PMCID:: PMC5014550

Abstract Article PDF–2.3M

Select item 470301213.

Target selection by natural and redesigned PUF proteins

Douglas F. Porter, Yvonne Y. Koh, Brett VanVeller, Ronald T. Raines, Marvin Wickens

Proc Natl Acad Sci U S A. 2015 Dec 29; 112(52): 15868–15873. Published online 2015 Dec 14. doi: 10.1073/pnas.1508501112

PMCID:: PMC4703012

Abstract Article PDF–1.3M

Select item 461603914.

Integrated multi-omics analyses reveal the pleiotropic nature of the control of gene expression by Puf3p

Christopher J. Kershaw, Joseph L. Costello, David Talavera, William Rowe, Lydia M. Castelli, Paul F. G. Sims, Christopher M. Grant, Mark P. Ashe, Simon J. Hubbard, Graham D. Pavitt

Sci Rep. 2015; 5: 15518. Published online 2015 Oct 23. doi: 10.1038/srep15518

PMCID:: PMC4616039

Abstract Article PDF–2.2M

Select item 414978415.

A chemical potentiator of copper-accumulation used to investigate the iron-regulons of Saccharomyces cerevisiae

Andrew W Foster, Samantha J Dainty, Carl J Patterson, Ehmke Pohl, Hannah Blackburn, Clare Wilson, Corinna R Hess, Julian C Rutherford, Laura Quaranta, Andy Corran, Nigel J Robinson

Mol Microbiol. 2014 Jul; 93(2): 317–330. Published online 2014 Jun 15. doi: 10.1111/mmi.12661

PMCID:: PMC4149784

Abstract Article PDF–3.7M

Select item 396403816.

Molecular mechanism and structure of the Saccharomyces cerevisiae iron regulator Aft2

Catherine B. Poor, Seraphine V. Wegner, Haoran Li, Adrienne C. Dlouhy, Jonathan P. Schuermann, Ruslan Sanishvili, James R. Hinshaw, Pamela J. Riggs-Gelasco, Caryn E. Outten, Chuan He

Proc Natl Acad Sci U S A. 2014 Mar 18; 111(11): 4043–4048. Published online 2014 Mar 3. doi: 10.1073/pnas.1318869111

PMCID:: PMC3964038

Abstract Article PDF–1.2M

Select item 357850717.

Monothiol glutaredoxins and A-type proteins: Partners in Fe-S cluster trafficking

Daphne T. Mapolelo, Bo Zhang, Sajini Randeniya, Angela-Nadia Albetel, Haoran Li, Jérémy Couturier, Caryn E. Outten, Nicolas Rouhier, Michael K. Johnson

Dalton Trans. Author manuscript; available in PMC 2014 Mar 7.

Published in final edited form as: Dalton Trans. 2013 Mar 7; 42(9): 3107–3115. Published online 2013 Jan 4. doi: 10.1039/c2dt32263c

PMCID:: PMC3578507

Abstract Article PDF–1.5M

Select item 355349718.

The cotranslational function of ribosome-associated Hsp70 in eukaryotic protein homeostasis

Felix Willmund, Marta del Alamo, Sebastian Pechmann, Taotao Chen, Veronique Albanese, Eric B. Dammer, Junmin Peng, Judith Frydman

Cell. Author manuscript; available in PMC 2014 Jan 17.

Published in final edited form as: Cell. 2013 Jan 17; 152(1-2): 196–209. doi: 10.1016/j.cell.2012.12.001

PMCID:: PMC3553497

Abstract Article PDF–5.1M

Select item 351004419.

The Yeast SR-Like Protein Npl3 Links Chromatin Modification to mRNA Processing

Erica A. Moehle, Colm J. Ryan, Nevan J. Krogan, Tracy L. Kress, Christine Guthrie

PLoS Genet. 2012 Nov; 8(11): e1003101. Published online 2012 Nov 29. doi: 10.1371/journal.pgen.1003101

PMCID:: PMC3510044

Abstract Article PDF–3.4M

Select item 328593320.

La-motif–dependent mRNA association with Slf1 promotes copper detoxification in yeast

Luca Schenk, Dominik M. Meinel, Katja Strässer, André P. Gerber

RNA. 2012 Mar; 18(3): 449–461. doi: 10.1261/rna.028506.111

PMCID:: PMC3285933

Abstract Article PDF–812K

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