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Select item 110121731.

Developmental and Housekeeping Genes: Two Types of Genetic Organization in the Drosophila Genome

Igor Zhimulev, Tatyana Vatolina, Victor Levitsky, Anton Tsukanov

Int J Mol Sci. 2024 Apr; 25(7): 4068. Published online 2024 Apr 6. doi: 10.3390/ijms25074068

PMCID:: PMC11012173

Article PDF–5.7M

Select item 101057362.

Next-generation large-scale binary protein interaction network for Drosophila melanogaster

Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István A. Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth H. Wan, Joel S. Bader, Dawit Balcha, Wenting Bian, Benjamin W. Booth, Atina G. Coté, Steffi de Rouck, Alice Desbuleux, Kah Yong Goh, Dae-Kyum Kim, Jennifer J. Knapp, Wen Xing Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Julianne Lim, Yifang Liu, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Dayag Sheykhkarimli, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael A. Calderwood, David E. Hill, Susan E. Celniker, Marc Vidal, Norbert Perrimon, Stephanie E. Mohr

Nat Commun. 2023; 14: 2162. Published online 2023 Apr 15. doi: 10.1038/s41467-023-37876-0

PMCID:: PMC10105736

Article PDF–3.2M

Select item 100402173.

Nucleoporins facilitate ORC loading onto chromatin

Logan Richards, Christopher L. Lord, Mary Lauren Benton, John A. Capra, Jared T. Nordman

Cell Rep. Author manuscript; available in PMC 2023 Mar 26.

Published in final edited form as: Cell Rep. 2022 Nov 8; 41(6): 111590. doi: 10.1016/j.celrep.2022.111590

PMCID:: PMC10040217

Article PDF–1.8M

Select item 99385904.

Proximity labeling reveals a new in vivo network of interactors for the histone demethylase KDM5

Matanel Yheskel, Simone Sidoli, Julie Secombe

Epigenetics Chromatin. 2023; 16: 8. Published online 2023 Feb 18. doi: 10.1186/s13072-023-00481-y

PMCID:: PMC9938590

Article PDF–4.8M

Select item 97246775.

The chromatin factor ROW cooperates with BEAF‐32 in regulating long‐range inducible genes

Neta Herman, Sebastian Kadener, Sagiv Shifman

EMBO Rep. 2022 Dec; 23(12): e54720. Published online 2022 Oct 17. doi: 10.15252/embr.202254720

PMCID:: PMC9724677

Article PDF–2.3M

Select item 95319456.

The Drosophila ZAD zinc finger protein Kipferl guides Rhino to piRNA clusters

Lisa Baumgartner, Dominik Handler, Sebastian Wolfgang Platzer, Changwei Yu, Peter Duchek, Julius Brennecke

eLife. 2022; 11: e80067. Published online 2022 Oct 4. doi: 10.7554/eLife.80067

PMCID:: PMC9531945

Article PDF–14M

Select item 94064937.

All Quiet on the TE Front? The Role of Chromatin in Transposable Element Silencing

Luisa Di Stefano

Cells. 2022 Aug; 11(16): 2501. Published online 2022 Aug 11. doi: 10.3390/cells11162501

PMCID:: PMC9406493

Article PDF–2.9M

Select item 90780078.

Functions of HP1 proteins in transcriptional regulation

John M. Schoelz, Nicole C. Riddle

Epigenetics Chromatin. 2022; 15: 14. Published online 2022 May 7. doi: 10.1186/s13072-022-00453-8

PMCID:: PMC9078007

Article PDF–1.1M

Select item 87830439.

Msl3 promotes germline stem cell differentiation in female Drosophila

Alicia McCarthy, Kahini Sarkar, Elliot T. Martin, Maitreyi Upadhyay, Seoyeon Jang, Nathan D. Williams, Paolo E. Forni, Michael Buszczak, Prashanth Rangan

Development. 2022 Jan 1; 149(1): dev199625. Published online 2022 Jan 4. doi: 10.1242/dev.199625

PMCID:: PMC8783043

Article

Select item 866448610.

Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes

Ana López-Varea, Patricia Vega-Cuesta, Ana Ruiz-Gómez, Cristina M Ostalé, Cristina Molnar, Covadonga F Hevia, Mercedes Martín, Maria F Organista, Jesus de Celis, Joaquín Culí, Nuria Esteban, Jose F de Celis

G3 (Bethesda) 2021 Dec; 11(12): jkab349. Published online 2021 Oct 2. doi: 10.1093/g3journal/jkab349

PMCID:: PMC8664486

Article PDF–3.1M

Select item 863313911.

The Drosophila HP1 family is associated with active gene expression across chromatin contexts

John M Schoelz, Justina X Feng, Nicole C Riddle

Genetics. 2021 Sep; 219(1): iyab108. Published online 2021 Jul 14. doi: 10.1093/genetics/iyab108

PMCID:: PMC8633139

Article PDF–1.1M

Select item 857404212.

An explainable artificial intelligence approach for decoding the enhancer histone modifications code and identification of novel enhancers in Drosophila

Jareth C. Wolfe, Liudmila A. Mikheeva, Hani Hagras, Nicolae Radu Zabet

Genome Biol. 2021; 22: 308. Published online 2021 Nov 8. doi: 10.1186/s13059-021-02532-7

PMCID:: PMC8574042

Article PDF–2.4M

Select item 842630813.

Unravelling HP1 functions: post-transcriptional regulation of stem cell fate

Assunta Maria Casale, Ugo Cappucci, Lucia Piacentini

Chromosoma. 2021; 130(2-3): 103–111. Published online 2021 Jun 15. doi: 10.1007/s00412-021-00760-1

PMCID:: PMC8426308

Article PDF–1.3M

Select item 822829314.

Multi-Scale Organization of the Drosophila melanogaster Genome

Samantha C. Peterson, Kaylah B. Samuelson, Stacey L. Hanlon

Genes (Basel) 2021 Jun; 12(6): 817. Published online 2021 May 27. doi: 10.3390/genes12060817

PMCID:: PMC8228293

Article PDF–1.0M

Select item 811344915.

CopyCatchers are versatile active genetic elements that detect and quantify inter-homolog somatic gene conversion

Zhiqian Li, Nimi Marcel, Sushil Devkota, Ankush Auradkar, Stephen M. Hedrick, Valentino M. Gantz, Ethan Bier

Nat Commun. 2021; 12: 2625. Published online 2021 May 11. doi: 10.1038/s41467-021-22927-1

PMCID:: PMC8113449

Article PDF–3.2M

Select item 802489616.

HP1c regulates development and gut homeostasis by suppressing Notch signaling through Su(H)

Jin Sun, Xia Wang, Rong‐Gang Xu, Decai Mao, Da Shen, Xin Wang, Yuhao Qiu, Yuting Han, Xinyi Lu, Yutong Li, Qinyun Che, Li Zheng, Ping Peng, Xuan Kang, Ruibao Zhu, Yu Jia, Yinyin Wang, Lu‐Ping Liu, Zhijie Chang, Jun‐Yuan Ji, Zhao Wang, Qingfei Liu, Shao Li, Fang‐Lin Sun, Jian‐Quan Ni

EMBO Rep. 2021 Apr 7; 22(4): e51298. Published online 2021 Feb 17. doi: 10.15252/embr.202051298

PMCID:: PMC8024896

Article PDF–3.7M

Select item 799218717.

Epigenetic Regulation of Drosophila Germline Stem Cell Maintenance and Differentiation

Velinda Vidaurre, Xin Chen

Dev Biol. Author manuscript; available in PMC 2022 May 1.

Published in final edited form as: Dev Biol. 2021 May; 473: 105–118. Published online 2021 Feb 18. doi: 10.1016/j.ydbio.2021.02.003

PMCID:: PMC7992187

Article PDF–1.0M

Select item 791941818.

Molecular principles of Piwi-mediated cotranscriptional silencing through the dimeric SFiNX complex

Jakob Schnabl, Juncheng Wang, Ulrich Hohmann, Maja Gehre, Julia Batki, Veselin I. Andreev, Kim Purkhauser, Nina Fasching, Peter Duchek, Maria Novatchkova, Karl Mechtler, Clemens Plaschka, Dinshaw J. Patel, Julius Brennecke

Genes Dev. 2021 Mar 1; 35(5-6): 392–409. doi: 10.1101/gad.347989.120

PMCID:: PMC7919418

Article PDF–15M

Select item 787420719.

Stellate Genes and the piRNA Pathway in Speciation and Reproductive Isolation of Drosophila melanogaster

Vladimir E. Adashev, Alexei A. Kotov, Sergei S. Bazylev, Aleksei S. Shatskikh, Alexei A. Aravin, Ludmila V. Olenina

Front Genet. 2020; 11: 610665. Published online 2021 Jan 22. doi: 10.3389/fgene.2020.610665

PMCID:: PMC7874207

Article PDF–2.9M

Select item 746593720.

Insights into HP1a-Chromatin Interactions

Silvia Meyer-Nava, Victor E. Nieto-Caballero, Mario Zurita, Viviana Valadez-Graham

Cells. 2020 Aug; 9(8): 1866. Published online 2020 Aug 9. doi: 10.3390/cells9081866

PMCID:: PMC7465937

Article PDF–2.2M

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