PMC Links for GEO Profiles (Select 2519041) - PMC

Select item 106817461.

LSM14B is essential for oocyte meiotic maturation by regulating maternal mRNA storage and clearance

Yanling Wan, Shuang Yang, Tongtong Li, Yuling Cai, Xinyue Wu, Mingyu Zhang, Tahir Muhammad, Tao Huang, Yue Lv, Wai-Yee Chan, Gang Lu, Jingxin Li, Qian-Qian Sha, Zi-Jiang Chen, Hongbin Liu

Nucleic Acids Res. 2023 Nov 27; 51(21): 11652–11667. Published online 2023 Oct 27. doi: 10.1093/nar/gkad919

PMCID:: PMC10681746

Abstract Article PDF–2.3M

Select item 102877002.

Maternal NAT10 orchestrates oocyte meiotic cell-cycle progression and maturation in mice

Xue Jiang, Yu Cheng, Yuzhang Zhu, Caoling Xu, Qiaodan Li, Xuemei Xing, Wenqing Li, Jiaqi Zou, Lan Meng, Muhammad Azhar, Yuzhu Cao, Xianhong Tong, Weibing Qin, Xiaoli Zhu, Jianqiang Bao

Nat Commun. 2023; 14: 3729. Published online 2023 Jun 22. doi: 10.1038/s41467-023-39256-0

PMCID:: PMC10287700

Abstract Article PDF–13M

Select item 91780063.

USP16-mediated histone H2A lysine-119 deubiquitination during oocyte maturation is a prerequisite for zygotic genome activation

Yan Rong, Ye-Zhang Zhu, Jia-li Yu, Yun-Wen Wu, Shu-Yan Ji, Yong Zhou, Yu Jiang, Jin Jin, Heng-Yu Fan, Li Shen, Qian-Qian Sha

Nucleic Acids Res. 2022 Jun 10; 50(10): 5599–5616. Published online 2022 May 30. doi: 10.1093/nar/gkac468

PMCID:: PMC9178006

Abstract Article PDF–6.6M

Select item 82822414.

Single‐cell RNA‐Seq reveals a highly coordinated transcriptional program in mouse germ cells during primordial follicle formation

Yuanlin He, Qiuzhen Chen, Juncheng Dai, Yiqiang Cui, Chi Zhang, Xidong Wen, Jiazhao Li, Yue Xiao, Xiaoxu Peng, Mingxi Liu, Bin Shen, Jiahao Sha, Zhibin Hu, Jing Li, Wenjie Shu

Aging Cell. 2021 Jul; 20(7): e13424. Published online 2021 Jun 26. doi: 10.1111/acel.13424

PMCID:: PMC8282241

Abstract Article PDF–3.6M

Select item 78652535.

Loss of Cnot6l Impairs Inosine RNA Modifications in Mouse Oocytes

Pavla Brachova, Nehemiah S. Alvarez, Lane K. Christenson

Int J Mol Sci. 2021 Feb; 22(3): 1191. Published online 2021 Jan 26. doi: 10.3390/ijms22031191

PMCID:: PMC7865253

Abstract Article PDF–6.9M

Select item 74037296.

PABPN1L mediates cytoplasmic mRNA decay as a placeholder during the maternal‐to‐zygotic transition

Long‐Wen Zhao, Ye‐Zhang Zhu, Hao Chen, Yun‐Wen Wu, Shuai‐Bo Pi, Lu Chen, Li Shen, Heng‐Yu Fan

EMBO Rep. 2020 Aug 5; 21(8): e49956. Published online 2020 Jun 17. doi: 10.15252/embr.201949956

PMCID:: PMC7403729

Abstract Article PDF–5.2M

Select item 69544487.

Characterization of zygotic genome activation-dependent maternal mRNA clearance in mouse

Qian-Qian Sha, Ye-Zhang Zhu, Sen Li, Yu Jiang, Lu Chen, Xiao-Hong Sun, Li Shen, Xiang-Hong Ou, Heng-Yu Fan

Nucleic Acids Res. 2020 Jan 24; 48(2): 879–894. Published online 2019 Nov 28. doi: 10.1093/nar/gkz1111

PMCID:: PMC6954448

Abstract Article PDF–5.5M

Select item 68683748.

ZAR1 and ZAR2 are required for oocyte meiotic maturation by regulating the maternal transcriptome and mRNA translational activation

Yan Rong, Shu-Yan Ji, Ye-Zhang Zhu, Yun-Wen Wu, Li Shen, Heng-Yu Fan

Nucleic Acids Res. 2019 Dec 2; 47(21): 11387–11402. Published online 2019 Oct 10. doi: 10.1093/nar/gkz863

PMCID:: PMC6868374

Abstract Article PDF–6.8M

Select item 63267939.

A combinatorial code for mRNA 3′-UTR-mediated translational control in the mouse oocyte

Xing-Xing Dai, Jun-Chao Jiang, Qian-Qian Sha, Yu Jiang, Xiang-Hong Ou, Heng-Yu Fan

Nucleic Acids Res. 2019 Jan 10; 47(1): 328–340. Published online 2018 Oct 18. doi: 10.1093/nar/gky971

PMCID:: PMC6326793

Abstract Article PDF–17M

Select item 629327610.

CNOT6L couples the selective degradation of maternal transcripts to meiotic cell cycle progression in mouse oocyte

Qian‐Qian Sha, Jia‐Li Yu, Jing‐Xin Guo, Xing‐Xing Dai, Jun‐Chao Jiang, Yin‐Li Zhang, Chao Yu, Shu‐Yan Ji, Yu Jiang, Song‐Ying Zhang, Li Shen, Xiang‐Hong Ou, Heng‐Yu Fan

EMBO J. 2018 Dec 14; 37(24): e99333. Published online 2018 Nov 26. doi: 10.15252/embj.201899333

PMCID:: PMC6293276

Abstract Article PDF–7.0M

Select item 504358111.

The BTG4 and CAF1 complex prevents the spontaneous activation of eggs by deadenylating maternal mRNAs

Michał Pasternak, Sybille Pfender, Balaji Santhanam, Melina Schuh

Open Biol. 2016 Sep; 6(9): 160184. Published online 2016 Sep 7. doi: 10.1098/rsob.160184

PMCID:: PMC5043581

Abstract Article PDF–1.6M

Select item 317805912.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 141356813.

BGEM: An In Situ Hybridization Database of Gene Expression in the Embryonic and Adult Mouse Nervous System

Susan Magdaleno, Patricia Jensen, Craig L Brumwell, Anna Seal, Karen Lehman, Andrew Asbury, Tony Cheung, Tommie Cornelius, Diana M Batten, Christopher Eden, Shannon M Norland, Dennis S Rice, Nilesh Dosooye, Sundeep Shakya, Perdeep Mehta, Tom Curran

PLoS Biol. 2006 Apr; 4(4): e86. Published online 2006 Mar 28. doi: 10.1371/journal.pbio.0040086

PMCID:: PMC1413568

Article PDF–99K

Select item 31111914.

Construction of Long-Transcript Enriched cDNA Libraries from Submicrogram Amounts of Total RNAs by a Universal PCR Amplification Method

Yulan Piao, Naomi T. Ko, Meng K. Lim, Minoru S.H. Ko

Genome Res. 2001 Sep; 11(9): 1553–1558. doi: 10.1101/gr.185501

PMCID:: PMC311119

Abstract Article PDF–743K

Select item 31099215.

RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer

Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki

Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600

PMCID:: PMC310992

Abstract Article PDF–3.4M

Select item 31098016.

Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes

Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki

Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100

PMCID:: PMC310980

Abstract Article PDF–1.4M

Select item 13924117.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Mammalian Gene Collection (MGC) Program Team

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899

PMCID:: PMC139241

Abstract Article PDF–118K

Select item 1683318.

Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray

Tetsuya S. Tanaka, Saied A. Jaradat, Meng K. Lim, George J. Kargul, Xiaohong Wang, Marija J. Grahovac, Serafino Pantano, Yuri Sano, Yulan Piao, Ramaiah Nagaraja, Hirofumi Doi, William H. Wood, III, Kevin G. Becker, Minoru S. H. Ko

Proc Natl Acad Sci U S A. 2000 Aug 1; 97(16): 9127–9132. doi: 10.1073/pnas.97.16.9127

PMCID:: PMC16833

Abstract Article PDF–847K

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