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Items: 1 to 20 of 24

1.
Assessment of community efforts to advance network-based prediction of protein–protein interactions
Xu-Wen Wang, Lorenzo Madeddu, Kerstin Spirohn, Leonardo Martini, Adriano Fazzone, Luca Becchetti, Thomas P. Wytock, István A. Kovács, Olivér M. Balogh, Bettina Benczik, Mátyás Pétervári, Bence Ágg, Péter Ferdinandy, Loan Vulliard, Jörg Menche, Stefania Colonnese, Manuela Petti, Gaetano Scarano, Francesca Cuomo, Tong Hao, Florent Laval, Luc Willems, Jean-Claude Twizere, Marc Vidal, Michael A. Calderwood, Enrico Petrillo, Albert-László Barabási, Edwin K. Silverman, Joseph Loscalzo, Paola Velardi, Yang-Yu Liu
Nat Commun. 2023; 14: 1582. Published online 2023 Mar 22. doi: 10.1038/s41467-023-37079-7
PMCID:
PMC10033937
AbstractArticlePDF–1.5M
2.
Integrative oncogene-dependency mapping identifies RIT1 vulnerabilities and synergies in lung cancer
Athea Vichas, Amanda K. Riley, Naomi T. Nkinsi, Shriya Kamlapurkar, Phoebe C. R. Parrish, April Lo, Fujiko Duke, Jennifer Chen, Iris Fung, Jacqueline Watson, Matthew Rees, Austin M. Gabel, James D. Thomas, Robert K. Bradley, John K. Lee, Emily M. Hatch, Marina K. Baine, Natasha Rekhtman, Marc Ladanyi, Federica Piccioni, Alice H. Berger
Nat Commun. 2021; 12: 4789. Published online 2021 Aug 9. doi: 10.1038/s41467-021-24841-y
PMCID:
PMC8352964
AbstractArticlePDF–4.5M
3.
Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome
Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi
Cell. Author manuscript; available in PMC 2022 May 27.
Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011
PMCID:
PMC8165030
AbstractArticlePDF–2.2M
4.
A reference map of the human binary protein interactome
Katja Luck, Dae-Kyum Kim, Luke Lambourne, Kerstin Spirohn, Bridget E. Begg, Wenting Bian, Ruth Brignall, Tiziana Cafarelli, Francisco J. Campos-Laborie, Benoit Charloteaux, Dongsic Choi, Atina G. Coté, Meaghan Daley, Steven Deimling, Alice Desbuleux, Amélie Dricot, Marinella Gebbia, Madeleine F. Hardy, Nishka Kishore, Jennifer J. Knapp, István A. Kovács, Irma Lemmens, Miles W. Mee, Joseph C. Mellor, Carl Pollis, Carles Pons, Aaron D. Richardson, Sadie Schlabach, Bridget Teeking, Anupama Yadav, Mariana Babor, Dawit Balcha, Omer Basha, Christian Bowman-Colin, Suet-Feung Chin, Soon Gang Choi, Claudia Colabella, Georges Coppin, Cassandra D’Amata, David De Ridder, Steffi De Rouck, Miquel Duran-Frigola, Hanane Ennajdaoui, Florian Goebels, Liana Goehring, Anjali Gopal, Ghazal Haddad, Elodie Hatchi, Mohamed Helmy, Yves Jacob, Yoseph Kassa, Serena Landini, Roujia Li, Natascha van Lieshout, Andrew MacWilliams, Dylan Markey, Joseph N. Paulson, Sudharshan Rangarajan, John Rasla, Ashyad Rayhan, Thomas Rolland, Adriana San-Miguel, Yun Shen, Dayag Sheykhkarimli, Gloria M. Sheynkman, Eyal Simonovsky, Murat Taşan, Alexander Tejeda, Vincent Tropepe, Jean-Claude Twizere, Yang Wang, Robert J. Weatheritt, Jochen Weile, Yu Xia, Xinping Yang, Esti Yeger-Lotem, Quan Zhong, Patrick Aloy, Gary D. Bader, Javier De Las Rivas, Suzanne Gaudet, Tong Hao, Janusz Rak, Jan Tavernier, David E. Hill, Marc Vidal, Frederick P. Roth, Michael A. Calderwood
Nature. Author manuscript; available in PMC 2020 Oct 8.
Published in final edited form as: Nature. 2020 Apr; 580(7803): 402–408. Published online 2020 Apr 8. doi: 10.1038/s41586-020-2188-x
PMCID:
PMC7169983
AbstractArticlePDF–5.4M
5.
Architecture of the human interactome defines protein communities and disease networks
Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper
Nature. Author manuscript; available in PMC 2017 Nov 17.
Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366
PMCID:
PMC5531611
AbstractArticlePDF–2.7M
6.
Group X Secreted Phospholipase A2 Releases ω3 Polyunsaturated Fatty Acids, Suppresses Colitis, and Promotes Sperm Fertility
Remi Murase, Hiroyasu Sato, Kei Yamamoto, Ayako Ushida, Yasumasa Nishito, Kazutaka Ikeda, Tetsuyuki Kobayashi, Toshinori Yamamoto, Yoshitaka Taketomi, Makoto Murakami
J Biol Chem. 2016 Mar 25; 291(13): 6895–6911. Published online 2016 Jan 31. doi: 10.1074/jbc.M116.715672
PMCID:
PMC4807275
AbstractArticlePDF–4.5M
7.
Endogenous secreted phospholipase A2 group X regulates cysteinyl leukotrienes sy nthesis by human eosinophils
Teal S. Hallstrand, Ying Lai, Kathryn A Hooper, Rob C. Oslund, William A. Altemeier, Gustavo Matute-Bello, Michael H. Gelb
J Allergy Clin Immunol. Author manuscript; available in PMC 2017 Jan 1.
Published in final edited form as: J Allergy Clin Immunol. 2016 Jan; 137(1): 268–277.e8. Published online 2015 Jun 30. doi: 10.1016/j.jaci.2015.05.026
PMCID:
PMC4695325
AbstractArticlePDF–1.2M
8.
Group X secreted phospholipase A2 induces lipid droplet formation and prolongs breast cancer cell survival
Anja Pucer, Vesna Brglez, Christine Payré, Jože Pungerčar, Gérard Lambeau, Toni Petan
Mol Cancer. 2013; 12: 111. Published online 2013 Sep 27. doi: 10.1186/1476-4598-12-111
PMCID:
PMC3852912
AbstractArticlePDF–3.0M
9.
Regulation and Function of Epithelial Secreted Phospholipase A2 Group X in Asthma
Teal S. Hallstrand, Ying Lai, William A. Altemeier, Cara L. Appel, Brian Johnson, Charles W. Frevert, Kelly L. Hudkins, James G. Bollinger, Prescott G. Woodruff, Dallas M. Hyde, William R. Henderson, Jr., Michael H. Gelb
Am J Respir Crit Care Med. 2013 Jul 1; 188(1): 42–50. Published online 2013 Jul 1. doi: 10.1164/rccm.201301-0084OC
PMCID:
PMC3735246
AbstractArticlePDF–395K
10.
Molecular Details of Membrane Fluidity Changes during Apoptosis and Relationship to Phospholipase A2 Activity
Elizabeth Gibbons, Katalyn R. Pickett, Michael C. Streeter, Ashley O. Warcup, Jennifer Nelson, Allan M. Judd, John D. Bell
Biochim Biophys Acta. Author manuscript; available in PMC 2014 Feb 1.
Published in final edited form as: Biochim Biophys Acta. 2013 Feb; 1828(2): 887–895. Published online 2012 Sep 4. doi: 10.1016/j.bbamem.2012.08.024
PMCID:
PMC3529823
AbstractArticlePDF–3.9M
11.
Group X Secreted Phospholipase A2 Proenzyme Is Matured by a Furin-like Proprotein Convertase and Releases Arachidonic Acid inside of Human HEK293 Cells
Ikram Jemel, Hiromi Ii, Rob C. Oslund, Christine Payré, Anne-Sophie Dabert-Gay, Dominique Douguet, Khaoula Chargui, Sabine Scarzello, Michael H. Gelb, Gérard Lambeau
J Biol Chem. 2011 Oct 21; 286(42): 36509–36521. Published online 2011 Aug 30. doi: 10.1074/jbc.M111.268540
PMCID:
PMC3196088
AbstractArticlePDF–2.0M
12.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
13.
Blockade of Human Group X Secreted Phospholipase A2 (GX-sPLA2)-induced Airway Inflammation and Hyperresponsiveness in a Mouse Asthma Model by a Selective GX-sPLA2 Inhibitor
William R. Henderson, Jr, Rob C. Oslund, James G. Bollinger, Xin Ye, Ying-tzang Tien, Jun Xue, Michael H. Gelb
J Biol Chem. 2011 Aug 12; 286(32): 28049–28055. Published online 2011 Jun 7. doi: 10.1074/jbc.M111.235812
PMCID:
PMC3151050
AbstractArticlePDF–1.2M
14.
Relationship between levels of secreted phospholipase A2 groups IIA and X in the airways and asthma severity
Teal S. Hallstrand, Ying Lai, Zhanglin Ni, Rob C. Oslund, William R. Henderson, Jr., Michael H. Gelb, Sally E. Wenzel
Clin Exp Allergy. Author manuscript; available in PMC 2012 Jun 1.
Published in final edited form as: Clin Exp Allergy. 2011 Jun; 41(6): 801–810. Published online 2011 Jan 24. doi: 10.1111/j.1365-2222.2010.03676.x
PMCID:
PMC3093436
AbstractArticlePDF–721K
15.
Production of Vascular Endothelial Growth Factors from Human Lung Macrophages Induced by Group IIA and Group X Secreted Phospholipases A2
Francescopaolo Granata, Annunziata Frattini, Stefania Loffredo, Rosaria I. Staiano, Angelica Petraroli, Domenico Ribatti, Rob Oslund, Michael H. Gelb, Gerard Lambeau, Gianni Marone, Massimo Triggiani
J Immunol. Author manuscript; available in PMC 2011 Apr 11.
Published in final edited form as: J Immunol. 2010 May 1; 184(9): 5232–5241. Published online 2010 Mar 31. doi: 10.4049/jimmunol.0902501
PMCID:
PMC3073479
AbstractArticlePDF–1.0M
16.
Eosinophil Cysteinyl Leukotriene Synthesis Mediated by Exogenous Secreted Phospholipase A2 Group X
Ying Lai, Rob C. Oslund, James G. Bollinger, William R. Henderson, Jr, Luis F. Santana, William A. Altemeier, Michael H. Gelb, Teal S. Hallstrand
J Biol Chem. 2010 Dec 31; 285(53): 41491–41500. Published online 2010 Oct 25. doi: 10.1074/jbc.M110.153338
PMCID:
PMC3009875
AbstractArticlePDF–2.5M
17.
Group X secretory phospholipase A2 augments Angiotensin II-induced inflammatory responses and abdominal aortic aneurysm formation in apoE-deficient mice
Melissa Zack, Boris B. Boyanovsky, Preetha Shridas, William Bailey, Kathy Forrest, Deborah A. Howatt, Michael H. Gelb, Frederick C. de Beer, Alan Daugherty, Nancy R. Webb
Atherosclerosis. Author manuscript; available in PMC 2012 Jan 1.
Published in final edited form as: Atherosclerosis. 2011 Jan; 214(1): 58–64. Published online 2010 Aug 19. doi: 10.1016/j.atherosclerosis.2010.08.054
PMCID:
PMC3005558
AbstractArticlePDF–1.0M
18.
Group X Secretory Phospholipase A2 Negatively Regulates ABCA1 and ABCG1 expression and cholesterol efflux in macrophages
Preetha Shridas, William M Bailey, Florence Gizard, Rob C Oslund, Michael H Gelb, Dennis Bruemmer, Nancy R Webb
Arterioscler Thromb Vasc Biol. Author manuscript; available in PMC 2011 Oct 1.
Published in final edited form as: Arterioscler Thromb Vasc Biol. 2010 Oct; 30(10): 2014–2021. doi: 10.1161/ATVBAHA.110.210237
PMCID:
PMC2958102
AbstractArticlePDF–130K
19.
Molecular and functional characterization of polymorphisms in the secreted phospholipase A2 group X gene: relevance to coronary artery disease
Sarah Gora, Claire Perret, Ikram Jemel, Viviane Nicaud, Gérard Lambeau, François Cambien, Ewa Ninio, Stefan Blankenberg, Laurence Tiret, Sonia-Athina Karabina
J Mol Med. 2009 Jul; 87(7): 723–733. Published online 2009 Jun 3. doi: 10.1007/s00109-009-0483-y
PMCID:
PMC2700867
AbstractArticlePDF–593K
20.
Integrated associations of genotypes with multiple blood biomarkers linked to coronary heart disease risk
Fotios Drenos, Philippa J. Talmud, Juan P. Casas, Liam Smeeth, Jutta Palmen, Steve E. Humphries, Aroon D. Hingorani
Hum Mol Genet. 2009 Jun 15; 18(12): 2305–2316. Published online 2009 Mar 31. doi: 10.1093/hmg/ddp159
PMCID:
PMC2685759
AbstractArticlePDF–530K

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