PMC Links for GEO Profiles (Select 26476921) - PMC

Select item 96038601.

The Deubiquitinating Enzyme USP48 Interacts with the Retinal Degeneration-Associated Proteins UNC119a and ARL3

Laura Sánchez-Bellver, Andrea Férriz-Gordillo, Marc Carrillo-Pz, Laura Rabanal, Francesc R. Garcia-Gonzalo, Gemma Marfany

Int J Mol Sci. 2022 Oct; 23(20): 12527. Published online 2022 Oct 19. doi: 10.3390/ijms232012527

PMCID:: PMC9603860

Abstract Article PDF–3.4M

Select item 80152412.

Groucho co-repressor proteins regulate β cell development and proliferation by repressing Foxa1 in the developing mouse pancreas

Alexandra Theis, Ruth A. Singer, Diana Garofalo, Alexander Paul, Anila Narayana, Lori Sussel

Development. 2021 Mar 15; 148(6): dev192401. Published online 2021 Mar 24. doi: 10.1242/dev.192401

PMCID:: PMC8015241

Abstract Article

Select item 79387703.

BraInMap elucidates the macromolecular connectivity landscape of mammalian brain

Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili

Cell Syst. Author manuscript; available in PMC 2021 Apr 22.

Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003

Correction in:: Cell Syst. 2020 Aug 26; 11(2): 208.

PMCID:: PMC7938770

Abstract Article PDF–2.0M

Select item 38800774.

Update of the human and mouse SERPIN gene superfamily

Claire Heit, Brian C Jackson, Monica McAndrews, Mathew W Wright, David C Thompson, Gary A Silverman, Daniel W Nebert, Vasilis Vasiliou

Hum Genomics. 2013; 7(1): 22. Published online 2013 Oct 30. doi: 10.1186/1479-7364-7-22

PMCID:: PMC3880077

Abstract Article PDF–595K

Select item 31780595.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 30225346.

A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo

Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio

PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582

PMCID:: PMC3022534

Abstract Article PDF–3.8M

Select item 27353647.

Mechanism of α-1 antitrypsin endocytosis by lung endothelium

Sadaf Sohrab, Daniela N. Petrusca, Angelia D. Lockett, Kelly S. Schweitzer, Natalia I. Rush, Yuan Gu, Krzysztof Kamocki, Jana Garrison, Irina Petrache

FASEB J. 2009 Sep; 23(9): 3149–3158. doi: 10.1096/fj.09-129304

PMCID:: PMC2735364

Abstract Article

Select item 27227808.

A Protein Interaction Network for the Large Conductance Ca²⁺-activated K⁺ Channel in the Mouse Cochlea

Thandavarayan Kathiresan, Margaret Harvey, Sandra Orchard, Yoshihisa Sakai, Bernd Sokolowski

Mol Cell Proteomics. 2009 Aug; 8(8): 1972–1987. Published online 2009 May 7. doi: 10.1074/mcp.M800495-MCP200

PMCID:: PMC2722780

Abstract Article PDF–1.0M

Select item 26713659.

Trappin-2 Promotes Early Clearance of Pseudomonas aeruginosa through CD14-Dependent Macrophage Activation and Neutrophil Recruitment

Thomas S. Wilkinson, Kevin Dhaliwal, Thomas W. Hamilton, Alexander F. Lipka, Lesley Farrell, Donald J. Davidson, Rodger Duffin, Andrew Conway Morris, Chris Haslett, John R.W. Govan, Christopher D. Gregory, Jean-Michel Sallenave, A. John Simpson

Am J Pathol. 2009 Apr; 174(4): 1338–1346. doi: 10.2353/ajpath.2009.080746

PMCID:: PMC2671365

Abstract Article PDF–341K

Select item 248143110.

Identification of transcripts with enriched expression in the developing and adult pancreas

Brad G Hoffman, Bogard Zavaglia, Joy Witzsche, Teresa Ruiz de Algara, Mike Beach, Pamela A Hoodless, Steven JM Jones, Marco A Marra, Cheryl D Helgason

Genome Biol. 2008; 9(6): R99. Published online 2008 Jun 14. doi: 10.1186/gb-2008-9-6-r99

PMCID:: PMC2481431

Abstract Article PDF–2.2M

Select item 237350211.

Mice deficient in involucrin, envoplakin, and periplakin have a defective epidermal barrier

Lisa M. Sevilla, Rachida Nachat, Karen R. Groot, John F. Klement, Jouni Uitto, Philippe Djian, Arto Määttä, Fiona M. Watt

J Cell Biol. 2007 Dec 31; 179(7): 1599–1612. doi: 10.1083/jcb.200706187

PMCID:: PMC2373502

Abstract Article PDF–5.1M

Select item 221312412.

Serine protease inhibitors serpina1 and serpina3 are down-regulated in bone marrow during hematopoietic progenitor mobilization

Ingrid G. Winkler, Jean Hendy, Paul Coughlin, Anita Horvath, Jean-Pierre Lévesque

J Exp Med. 2005 Apr 4; 201(7): 1077–1088. doi: 10.1084/jem.20042299

PMCID:: PMC2213124

Abstract Article PDF–1.6M

Select item 136056813.

Serpina1 is a potent inhibitor of IL-8-induced hematopoietic stem cell mobilization

Melissa van Pel, Ronald van Os, Gerjo A. Velders, Henny Hagoort, Peter M. H. Heegaard, Ivan J. D. Lindley, Roel Willemze, Willem E. Fibbe

Proc Natl Acad Sci U S A. 2006 Jan 31; 103(5): 1469–1474. Published online 2006 Jan 23. doi: 10.1073/pnas.0510192103

PMCID:: PMC1360568

Abstract Article PDF–498K

Select item 52892814.

The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)

Genome Res. 2004 Oct; 14(10b): 2121–2127. doi: 10.1101/gr.2596504

Correction in:: Genome Res. 2006 Jun; 16(6): 804.

PMCID:: PMC528928

Abstract Article PDF–140K

Select item 31099215.

RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer

Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki

Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600

PMCID:: PMC310992

Abstract Article PDF–3.4M

Select item 31098016.

Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes

Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki

Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100

PMCID:: PMC310980

Abstract Article PDF–1.4M

Select item 14777017.

Divergent expression of alpha1-protease inhibitor genes in mouse and human.

J Tardiff, K S Krauter

Nucleic Acids Res. 1998 Aug 15; 26(16): 3794–3799. doi: 10.1093/nar/26.16.3794

PMCID:: PMC147770

Summary PDF–216K

Select item 13924118.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Mammalian Gene Collection (MGC) Program Team

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899

PMCID:: PMC139241

Abstract Article PDF–118K

Select item 5272819.

Multiple murine alpha 1-protease inhibitor genes show unusual evolutionary divergence.

F Borriello, K S Krauter

Proc Natl Acad Sci U S A. 1991 Nov 1; 88(21): 9417–9421. doi: 10.1073/pnas.88.21.9417

PMCID:: PMC52728

Summary Page Browse PDF–1.1M

Select item 1683320.

Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray

Tetsuya S. Tanaka, Saied A. Jaradat, Meng K. Lim, George J. Kargul, Xiaohong Wang, Marija J. Grahovac, Serafino Pantano, Yuri Sano, Yulan Piao, Ramaiah Nagaraja, Hirofumi Doi, William H. Wood, III, Kevin G. Becker, Minoru S. H. Ko

Proc Natl Acad Sci U S A. 2000 Aug 1; 97(16): 9127–9132. doi: 10.1073/pnas.97.16.9127

PMCID:: PMC16833

Abstract Article PDF–847K

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