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Items: 1 to 20 of 32

1.
The structural basis for release-factor activation during translation termination revealed by time-resolved cryogenic electron microscopy
Ziao Fu, Gabriele Indrisiunaite, Sandip Kaledhonkar, Binita Shah, Ming Sun, Bo Chen, Robert A. Grassucci, Måns Ehrenberg, Joachim Frank
Nat Commun. 2019; 10: 2579. Published online 2019 Jun 12. doi: 10.1038/s41467-019-10608-z
PMCID:
PMC6561943
AbstractArticlePDF–1.8M
2.
Dynamics of ribosomes and release factors during translation termination in E. coli
Sarah Adio, Heena Sharma, Tamara Senyushkina, Prajwal Karki, Cristina Maracci, Ingo Wohlgemuth, Wolf Holtkamp, Frank Peske, Marina V Rodnina
eLife. 2018; 7: e34252. Published online 2018 Jun 11. doi: 10.7554/eLife.34252
PMCID:
PMC5995542
AbstractArticlePDF–4.1M
3.
Cryo-EM visualization of the ribosome in termination complex with apo-RF3 and RF1
Jesper Pallesen, Yaser Hashem, Gürkan Korkmaz, Ravi Kiran Koripella, Chenhui Huang, Måns Ehrenberg, Suparna Sanyal, Joachim Frank
eLife. 2013; 2: e00411. Published online 2013 Jun 4. doi: 10.7554/eLife.00411
PMCID:
PMC3677378
AbstractArticlePDF–8.8M
4.
Enhanced phosphoserine insertion during Escherichia coli protein synthesis via partial UAG codon reassignment and release factor 1 deletion
Ilka U. Heinemann, Alexis J. Rovner, Hans R. Aerni, Svetlana Rogulina, Laura Cheng, William Olds, Jonathan T. Fischer, Dieter Söll, Farren J. Isaacs, Jesse Rinehart
FEBS Lett. Author manuscript; available in PMC 2013 Oct 19.
Published in final edited form as: FEBS Lett. 2012 Oct 19; 586(20): 3716–3722. Published online 2012 Sep 13. doi: 10.1016/j.febslet.2012.08.031
PMCID:
PMC3473164
AbstractArticlePDF–1.4M
5.
Release Factor One Is Nonessential in Escherichia coli
David B. F. Johnson, Chong Wang, Jianfeng Xu, Matthew D. Schultz, Robert J. Schmitz, Joseph R. Ecker, Lei Wang
ACS Chem Biol. 2012 Aug 17; 7(8): 1337–1344. Published online 2012 Jun 5. doi: 10.1021/cb300229q
PMCID:
PMC3423824
AbstractArticlePDF–1.5M
6.
Histidine 197 in Release Factor 1 is Essential for A Site Binding and Peptide Release
Andrew Field, Byron Hetrick, Merrill Mathew, Simpson Joseph
Biochemistry. Author manuscript; available in PMC 2011 Nov 2.
Published in final edited form as: Biochemistry. 2010 Nov 2; 49(43): 9385–9390. doi: 10.1021/bi1012047
PMCID:
PMC2967428
AbstractArticlePDF–756K
7.
Kinetics of paused ribosome recycling in Escherichia coli
Brian D. Janssen, Christopher S. Hayes
J Mol Biol. Author manuscript; available in PMC 2010 Nov 27.
Published in final edited form as: J Mol Biol. 2009 Nov 27; 394(2): 251–267. Published online 2009 Sep 15. doi: 10.1016/j.jmb.2009.09.020
PMCID:
PMC2783371
AbstractArticlePDF–5.2M
8.
Novel Escherichia coli RF1 mutants with decreased translation termination activity and increased sensitivity to the cytotoxic effect of the bacterial toxins Kid and RelE
Elizabeth Diago-Navarro, Liliana Mora, Richard H Buckingham, Ramón Díaz-Orejas, Marc Lemonnier
Mol Microbiol. 2008 Jan; 71(1): 66–78. Published online 2008 Oct 31. doi: 10.1111/j.1365-2958.2008.06510.x
PMCID:
PMC2680264
AbstractArticlePDF–626K
9.
Hypomodification of the Wobble Base in tRNAGlu, tRNALys, and tRNAGln Suppresses the Temperature-Sensitive Phenotype Caused by Mutant Release Factor 1
Georgina Isak, Monica Rydén-Aulin
J Bacteriol. 2009 Mar; 191(5): 1604–1609. Published online 2008 Dec 19. doi: 10.1128/JB.01485-08
PMCID:
PMC2648207
AbstractArticlePDF–227K
10.
Protein abundance profiling of the Escherichia coli cytosol
Yasushi Ishihama, Thorsten Schmidt, Juri Rappsilber, Matthias Mann, F Ulrich Hartl, Michael J Kerner, Dmitrij Frishman
BMC Genomics. 2008; 9: 102. Published online 2008 Feb 27. doi: 10.1186/1471-2164-9-102
PMCID:
PMC2292177
AbstractArticlePDF–1.0M
11.
Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection
Tomoya Baba, Takeshi Ara, Miki Hasegawa, Yuki Takai, Yoshiko Okumura, Miki Baba, Kirill A Datsenko, Masaru Tomita, Barry L Wanner, Hirotada Mori
Mol Syst Biol. 2006; 2: 2006.0008. Published online 2006 Feb 21. doi: 10.1038/msb4100050
PMCID:
PMC1681482
AbstractArticlePDF–400K
12.
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110
Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi
Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049
PMCID:
PMC1681481
AbstractArticlePDF–141K
13.
Escherichia coli K-12: a cooperatively developed annotation snapshot—2005
Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner
Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405
PMCID:
PMC1325200
AbstractArticlePDF–204K
14.
Competition between trans-translation and termination or elongation of translation
Krisana Asano, Daisuke Kurita, Kazuma Takada, Takayuki Konno, Akira Muto, Hyouta Himeno
Nucleic Acids Res. 2005; 33(17): 5544–5552. Published online 2005 Oct 4. doi: 10.1093/nar/gki871
PMCID:
PMC1243801
AbstractArticlePDF–143K
15.
Release factor RF3 in E.coli accelerates the dissociation of release factors RF1 and RF2 from the ribosome in a GTP-dependent manner.
D V Freistroffer, M Y Pavlov, J MacDougall, R H Buckingham, M Ehrenberg
EMBO J. 1997 Jul 1; 16(13): 4126–4133. doi: 10.1093/emboj/16.13.4126
PMCID:
PMC1170035
SummaryPDF–381K
16.
Temperature Sensitivity Caused by Mutant Release Factor 1 Is Suppressed by Mutations That Affect 16S rRNA Maturation
Magdalena Kaczanowska, Monica Rydén-Aulin
J Bacteriol. 2004 May; 186(10): 3046–3055. doi: 10.1128/JB.186.10.3046-3055.2004
PMCID:
PMC400638
AbstractArticlePDF–1.0M
17.
Bacterial peptide chain release factors: conserved primary structure and possible frameshift regulation of release factor 2.
W J Craigen, R G Cook, W P Tate, C T Caskey
Proc Natl Acad Sci U S A. 1985 Jun; 82(11): 3616–3620. doi: 10.1073/pnas.82.11.3616
PMCID:
PMC397836
SummaryPage BrowsePDF–1.1M
18.
Polypeptide chain termination in vitro: isolation of a release factor.
M R Capecchi
Proc Natl Acad Sci U S A. 1967 Sep; 58(3): 1144–1151. doi: 10.1073/pnas.58.3.1144
PMCID:
PMC335760
SummaryPage BrowsePDF–1017K
19.
A post-translational modification in the GGQ motif of RF2 from Escherichia coli stimulates termination of translation
Vildan Dinçbas-Renqvist, Åke Engström, Liliana Mora, Valérie Heurgué-Hamard, Richard Buckingham, Måns Ehrenberg
EMBO J. 2000 Dec 15; 19(24): 6900–6907. doi: 10.1093/emboj/19.24.6900
PMCID:
PMC305885
AbstractArticlePDF–223K
20.
Release factors differing in specificity for terminator codons.
E Scolnick, R Tompkins, T Caskey, M Nirenberg
Proc Natl Acad Sci U S A. 1968 Oct; 61(2): 768–774. doi: 10.1073/pnas.61.2.768
PMCID:
PMC225226
SummaryPage BrowsePDF–785K

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