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Items: 1 to 20 of 36

1.
The social and structural architecture of the yeast protein interactome
André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann
Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5
PMCID:
PMC10700138
AbstractArticlePDF–20M
2.
Checkpoint kinase interaction with DNA polymerase alpha regulates replication progression during stress
Andreas Hadjicharalambous, Alex J. Whale, Geylani Can, J. Mark Skehel, Jonathan M. Houseley, Philip Zegerman
Version 1. Wellcome Open Res. 2023; 8: 327. Published online 2023 Jul 26. doi: 10.12688/wellcomeopenres.19617.1
PMCID:
PMC10521137
AbstractArticlePDF–4.0M
3.
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources
Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry
Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224
PMCID:
PMC9209811
AbstractArticlePDF–818K
4.
The box C/D snoRNP assembly factor Bcd1 interacts with the histone chaperone Rtt106 and controls its transcription dependent activity
Benoît Bragantini, Christophe Charron, Maxime Bourguet, Arnaud Paul, Decebal Tiotiu, Benjamin Rothé, Hélène Marty, Guillaume Terral, Steve Hessmann, Laurence Decourty, Marie-Eve Chagot, Jean-Marc Strub, Séverine Massenet, Edouard Bertrand, Marc Quinternet, Cosmin Saveanu, Sarah Cianférani, Stéphane Labialle, Xavier Manival, Bruno Charpentier
Nat Commun. 2021; 12: 1859. Published online 2021 Mar 25. doi: 10.1038/s41467-021-22077-4
PMCID:
PMC7994586
AbstractArticlePDF–3.4M
5.
Heme, A Metabolic Sensor, Directly Regulates the Activity of the KDM4 Histone Demethylase Family and Their Interactions with Partner Proteins
Purna Chaitanya Konduri, Tianyuan Wang, Narges Salamat, Li Zhang
Cells. 2020 Mar; 9(3): 773. Published online 2020 Mar 22. doi: 10.3390/cells9030773
PMCID:
PMC7140707
AbstractArticlePDF–3.2M
6.
A conserved Bcd1 interaction essential for box C/D snoRNP biogenesis
Sohail Khoshnevis, R. Elizabeth Dreggors, Tobias F.R. Hoffmann, Homa Ghalei
J Biol Chem. 2019 Nov 29; 294(48): 18360–18371. Published online 2019 Sep 19. doi: 10.1074/jbc.RA119.010222
PMCID:
PMC6885627
AbstractArticlePDF–2.2M
7.
Bcd1p controls RNA loading of the core protein Nop58 during C/D box snoRNP biogenesis
Arnaud Paul, Decebal Tiotiu, Benoît Bragantini, Hélène Marty, Bruno Charpentier, Séverine Massenet, Stéphane Labialle
RNA. 2019 Apr; 25(4): 496–506. doi: 10.1261/rna.067967.118
PMCID:
PMC6426285
AbstractArticlePDF–1.9M
8.
Genome-Wide Mapping of Decay Factor–mRNA Interactions in Yeast Identifies Nutrient-Responsive Transcripts as Targets of the Deadenylase Ccr4
Jason E. Miller, Liye Zhang, Haoyang Jiang, Yunfei Li, B. Franklin Pugh, Joseph C. Reese
G3 (Bethesda) 2018 Jan; 8(1): 315–330. Published online 2017 Nov 20. doi: 10.1534/g3.117.300415
PMCID:
PMC5765359
AbstractArticlePDF–2.2M
9.
The ribosome assembly gene network is controlled by the feedback regulation of transcription elongation
Fernando Gómez-Herreros, Thanasis Margaritis, Olga Rodríguez-Galán, Vicent Pelechano, Victoria Begley, Gonzalo Millán-Zambrano, Macarena Morillo-Huesca, Mari Cruz Muñoz-Centeno, José E. Pérez-Ortín, Jesús de la Cruz, Frank C. P. Holstege, Sebastián Chávez
Nucleic Acids Res. 2017 Sep 19; 45(16): 9302–9318. Published online 2017 Jun 15. doi: 10.1093/nar/gkx529
PMCID:
PMC5737610
AbstractArticlePDF–2.4M
10.
Implication of the box C/D snoRNP assembly factor Rsa1p in U3 snoRNP assembly
Benjamin Rothé, Xavier Manival, Nicolas Rolland, Christophe Charron, Véronique Senty-Ségault, Christiane Branlant, Bruno Charpentier
Nucleic Acids Res. 2017 Jul 7; 45(12): 7455–7473. Published online 2017 May 13. doi: 10.1093/nar/gkx424
PMCID:
PMC5499572
AbstractArticlePDF–11M
11.
A systematic genetic screen for genes involved in sensing inorganic phosphate availability in Saccharomyces cerevisiae
Joonhyuk Choi, Abbhirami Rajagopal, Yi-Fan Xu, Joshua D. Rabinowitz, Erin K. O’Shea
PLoS One. 2017; 12(5): e0176085. Published online 2017 May 17. doi: 10.1371/journal.pone.0176085
PMCID:
PMC5435139
AbstractArticlePDF–1.9M
12.
Functional Metabolomics Describes the Yeast Biosynthetic Regulome
Michael Mülleder, Enrica Calvani, Mohammad Tauqeer Alam, Richard Kangda Wang, Florian Eckerstorfer, Aleksej Zelezniak, Markus Ralser
Cell. 2016 Oct 6; 167(2): 553–565.e12. doi: 10.1016/j.cell.2016.09.007
PMCID:
PMC5055083
AbstractArticlePDF–3.9M
13.
Systematic identification of genes involved in metabolic acid stress resistance in yeast and their potential as cancer targets
John J. Shin, Qurratulain Aftab, Pamela Austin, Jennifer A. McQueen, Tak Poon, Shu Chen Li, Barry P. Young, Calvin D. Roskelley, Christopher J. R. Loewen
Dis Model Mech. 2016 Sep 1; 9(9): 1039–1049. doi: 10.1242/dmm.023374
PMCID:
PMC5047693
AbstractArticle
14.
Saccharomyces cerevisiae Is Dependent on Vesicular Traffic between the Golgi Apparatus and the Vacuole When Inositolphosphorylceramide Synthase Aur1 Is Inactivated
Natalia S. Voynova, Carole Roubaty, Hector M. Vazquez, Shamroop K. Mallela, Christer S. Ejsing, Andreas Conzelmann
Eukaryot Cell. 2015 Dec; 14(12): 1203–1216. Prepublished online 2015 Oct 2. Published online 2015 Nov 30. doi: 10.1128/EC.00117-15
PMCID:
PMC4664882
AbstractArticlePDF–2.3M
15.
NUFIP and the HSP90/R2TP chaperone bind the SMN complex and facilitate assembly of U4-specific proteins
Jonathan Bizarro, Maxime Dodré, Alexandra Huttin, Bruno Charpentier, Florence Schlotter, Christiane Branlant, Céline Verheggen, Séverine Massenet, Edouard Bertrand
Nucleic Acids Res. 2015 Oct 15; 43(18): 8973–8989. Published online 2015 Oct 10. doi: 10.1093/nar/gkv809
PMCID:
PMC4605303
AbstractArticlePDF–11M
16.
Quantitative proteomics of the yeast Hsp70/Hsp90 interactomes during DNA damage reveals chaperone-dependent regulation of ribonucleotide reductase
Andrew W. Truman, Kolbrun Kristjansdottir, Donald Wolfgeher, Natalia Ricco, Anoop Mayampurath, Samuel L. Volchenboum, Josep Clotet, Stephen J. Kron
J Proteomics. Author manuscript; available in PMC 2015 Jun 30.
Published in final edited form as: J Proteomics. 2015 Jan 1; 112: 285–300. Published online 2014 Oct 18. doi: 10.1016/j.jprot.2014.09.028
PMCID:
PMC4485990
AbstractArticlePDF–2.0M
17.
The quantitative changes in the yeast Hsp70 and Hsp90 interactomes upon DNA damage
Andrew W. Truman, Kolbrun Kristjansdottir, Donald Wolfgeher, Natalia Ricco, Anoop Mayampurath, Samuel L. Volchenboum, Josep Clotet, Stephen J. Kron
Data Brief. 2015 Mar; 2: 12–15. Published online 2014 Nov 7. doi: 10.1016/j.dib.2014.10.006
PMCID:
PMC4459869
AbstractArticlePDF–178K
18.
Nop17 is a key R2TP factor for the assembly and maturation of box C/D snoRNP complex
Marcela B Prieto, Raphaela C Georg, Fernando A Gonzales-Zubiate, Juliana S Luz, Carla C Oliveira
BMC Mol Biol. 2015; 16: 7. Published online 2015 Mar 18. doi: 10.1186/s12867-015-0037-5
PMCID:
PMC4377001
AbstractArticlePDF–3.0M
19.
Proteomic and 3D structure analyses highlight the C/D box snoRNP assembly mechanism and its control
Jonathan Bizarro, Christophe Charron, Séverine Boulon, Belinda Westman, Bérengère Pradet-Balade, Franck Vandermoere, Marie-Eve Chagot, Marie Hallais, Yasmeen Ahmad, Heinrich Leonhardt, Angus Lamond, Xavier Manival, Christiane Branlant, Bruno Charpentier, Céline Verheggen, Edouard Bertrand
J Cell Biol. 2014 Nov 24; 207(4): 463–480. doi: 10.1083/jcb.201404160
PMCID:
PMC4242836
AbstractArticlePDF–4.1M
20.
Protein Hit1, a novel box C/D snoRNP assembly factor, controls cellular concentration of the scaffolding protein Rsa1 by direct interaction
Benjamin Rothé, Jean-Michel Saliou, Marc Quinternet, Régis Back, Decebal Tiotiu, Clémence Jacquemin, Christine Loegler, Florence Schlotter, Vlad Peña, Kelvin Eckert, Solange Moréra, Alain Van Dorsselaer, Christiane Branlant, Séverine Massenet, Sarah Sanglier-Cianférani, Xavier Manival, Bruno Charpentier
Nucleic Acids Res. 2014 Sep 15; 42(16): 10731–10747. Published online 2014 Aug 28. doi: 10.1093/nar/gku612
PMCID:
PMC4176330
AbstractArticlePDF–6.3M

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