PMC Links for GEO Profiles (Select 28530414) - PMC

Oguz Kanca, Jonathan Zirin, Yanhui Hu, Burak Tepe, Debdeep Dutta, Wen-Wen Lin, Liwen Ma, Ming Ge, Zhongyuan Zuo, Lu-Ping Liu, Robert W Levis, Norbert Perrimon, Hugo J Bellen

eLife. 2022; 11: e76077. Published online 2022 Jun 20. doi: 10.7554/eLife.76077

PMCID:: PMC9239680

Abstract Article PDF–1.2M

Select item 76954526.

Opposing JAK-STAT and Wnt signaling gradients define a stem cell domain by regulating differentiation at two borders

David Melamed, Daniel Kalderon

eLife. 2020; 9: e61204. Published online 2020 Nov 2. doi: 10.7554/eLife.61204

PMCID:: PMC7695452

Abstract Article PDF–6.2M

Select item 59535007.

Gene regulatory network architecture in different developmental contexts influences the genetic basis of morphological evolution

Sebastian Kittelmann, Alexandra D. Buffry, Franziska A. Franke, Isabel Almudi, Marianne Yoth, Gonzalo Sabaris, Juan Pablo Couso, Maria D. S. Nunes, Nicolás Frankel, José Luis Gómez-Skarmeta, Jose Pueyo-Marques, Saad Arif, Alistair P. McGregor

PLoS Genet. 2018 May; 14(5): e1007375. Published online 2018 May 3. doi: 10.1371/journal.pgen.1007375

PMCID:: PMC5953500

Abstract Article PDF–9.3M

Select item 56890028.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 54069809.

Inter- and intra-species variation in genome-wide gene expression of Drosophila in response to parasitoid wasp attack

Laura Salazar-Jaramillo, Kirsten M. Jalvingh, Ammerins de Haan, Ken Kraaijeveld, Henk Buermans, Bregje Wertheim

BMC Genomics. 2017; 18: 331. Published online 2017 Apr 27. doi: 10.1186/s12864-017-3697-3

PMCID:: PMC5406980

Abstract Article PDF–2.1M

Select item 452833010.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 452832911.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

Select item 435288712.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114

PMCID:: PMC4352887

Abstract Article PDF–1022K

Select item 419771013.

Analysis of the expression patterns, subcellular localisations and interaction partners of Drosophila proteins using a pigP protein trap library

Nick Lowe, Johanna S. Rees, John Roote, Ed Ryder, Irina M. Armean, Glynnis Johnson, Emma Drummond, Helen Spriggs, Jenny Drummond, Jose P. Magbanua, Huw Naylor, Bénédicte Sanson, Rebecca Bastock, Sven Huelsmann, Vitor Trovisco, Matthias Landgraf, Seymour Knowles-Barley, J. Douglas Armstrong, Helen White-Cooper, Celia Hansen, Roger G. Phillips, The UK Drosophila Protein Trap Screening Consortium, Kathryn S. Lilley, Steven Russell, Daniel St Johnston

Development. 2014 Oct; 141(20): 3994–4005. doi: 10.1242/dev.111054

PMCID:: PMC4197710

Abstract Article

Select item 405398914.

Genome-wide analyses of Shavenbaby target genes reveals distinct features of enhancer organization

Delphine Menoret, Marc Santolini, Isabelle Fernandes, Rebecca Spokony, Jennifer Zanet, Ignacio Gonzalez, Yvan Latapie, Pierre Ferrer, Hervé Rouault, Kevin P White, Philippe Besse, Vincent Hakim, Stein Aerts, Francois Payre, Serge Plaza

Genome Biol. 2013; 14(8): R86. Published online 2013 Aug 23. doi: 10.1186/gb-2013-14-8-r86

PMCID:: PMC4053989

Abstract Article PDF–2.2M

Select item 368650915.

dusky-like is required to maintain the integrity and planar cell polarity of hairs during the development of the Drosophila wing

Paul N. Adler, Lukasz F. Sobala, DeSean Thom, Ranganayaki Nagaraj

Dev Biol. Author manuscript; available in PMC 2014 Jul 1.

Published in final edited form as: Dev Biol. 2013 Jul 1; 379(1): 76–91. Published online 2013 Apr 23. doi: 10.1016/j.ydbio.2013.04.012

PMCID:: PMC3686509

Abstract Article PDF–4.7M

Select item 360557716.

Evolution of mir-92a Underlies Natural Morphological Variation in Drosophila melanogaster

Saad Arif, Sophie Murat, Isabel Almudi, Maria D.S. Nunes, Diane Bortolamiol-Becet, Naomi S. McGregor, James M.S. Currie, Harri Hughes, Matthew Ronshaugen, Élio Sucena, Eric C. Lai, Christian Schlötterer, Alistair P. McGregor

Curr Biol. 2013 Mar 18; 23(6): 523–528. doi: 10.1016/j.cub.2013.02.018