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Items: 1 to 20 of 104

1.
Misregulation of cell cycle-dependent methylation of budding yeast CENP-A contributes to chromosomal instability
Prashant K. Mishra, Wei-Chun Au, Pedro G. Castineira, Nazrin Ali, John Stanton, Lars Boeckmann, Yoshimitsu Takahashi, Michael Costanzo, Charles Boone, Kerry S. Bloom, Peter H. Thorpe, Munira A. Basrai
Mol Biol Cell. 2023 Sep 1; 34(10): ar99. Published online 2023 Aug 17. doi: 10.1091/mbc.E23-03-0108
PMCID:
PMC10551700
AbstractArticlePDF–3.7M
2.
An essential Noc3p dimerization cycle mediates ORC double-hexamer formation in replication licensing
Aftab Amin, Rentian Wu, Muhammad Ajmal Khan, Man Hei Cheung, Yanting Liang, Changdong Liu, Guang Zhu, Zhi-Ling Yu, Chun Liang
Life Sci Alliance. 2023 Mar; 6(3): e202201594. Published online 2023 Jan 4. doi: 10.26508/lsa.202201594
PMCID:
PMC9813392
AbstractArticlePDF–4.3M
3.
A balancing act: interactions within NuA4/TIP60 regulate picNuA4 function in Saccharomyces cerevisiae and humans
Phoebe Y T Lu, Alyssa C Kirlin, Maria J Aristizabal, Hilary T Brewis, Nancy Lévesque, Dheva T Setiaputra, Nikita Avvakumov, Joris J Benschop, Marian Groot Koerkamp, Frank C P Holstege, Nevan J Krogan, Calvin K Yip, Jacques Côté, Michael S Kobor
Genetics. 2022 Nov; 222(3): iyac136. Published online 2022 Sep 6. doi: 10.1093/genetics/iyac136
PMCID:
PMC9630986
AbstractArticlePDF–2.2M
4.
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources
Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry
Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224
PMCID:
PMC9209811
AbstractArticlePDF–818K
5.
Phosphoproteomics reveals a distinctive Mec1/ATR signaling response upon DNA end hyper‐resection
Ethan J Sanford, William J Comstock, Vitor M Faça, Stephanie C Vega, Robert Gnügge, Lorraine S Symington, Marcus B Smolka
EMBO J. 2021 May 17; 40(10): e104566. Published online 2021 Mar 25. doi: 10.15252/embj.2020104566
PMCID:
PMC8126923
AbstractArticlePDF–2.3M
6.
Interaction of replication factor Sld3 and histone acetyl transferase Esa1 alleviates gene silencing and promotes the activation of late and dormant replication origins
Seiji Tanaka
Genetics. 2021 Jan; 217(1): iyaa001. Published online 2020 Nov 11. doi: 10.1093/genetics/iyaa001
PMCID:
PMC8045687
AbstractArticlePDF–873K
7.
DDK regulates replication initiation by controlling the multiplicity of Cdc45-GINS binding to Mcm2-7
Lorraine De Jesús-Kim, Larry J Friedman, Marko Lõoke, Christian K Ramsoomair, Jeff Gelles, Stephen P Bell
eLife. 2021; 10: e65471. Published online 2021 Feb 22. doi: 10.7554/eLife.65471
PMCID:
PMC7954526
AbstractArticlePDF–3.6M
8.
Comprehensive Synthetic Genetic Array Analysis of Alleles That Interact with Mutation of the Saccharomyces cerevisiae RecQ Helicases Hrq1 and Sgs1
Elsbeth Sanders, Phoebe A. Nguyen, Cody M. Rogers, Matthew L. Bochman
G3 (Bethesda) 2020 Dec; 10(12): 4359–4368. Published online 2020 Oct 28. doi: 10.1534/g3.120.401709
PMCID:
PMC7718751
AbstractArticlePDF–1.2M
9.
DNA polymerase ε relies on a unique domain for efficient replisome assembly and strand synthesis
Xiangzhou Meng, Lei Wei, Sujan Devbhandari, Tuo Zhang, Jenny Xiang, Dirk Remus, Xiaolan Zhao
Nat Commun. 2020; 11: 2437. Published online 2020 May 15. doi: 10.1038/s41467-020-16095-x
PMCID:
PMC7228970
AbstractArticlePDF–2.7M
10.
Mec1ATR autophosphorylation and Ddc2ATRIP phosphorylation regulates DNA damage checkpoint signaling
Gonen Memisoglu, Michael C. Lanz, Vinay V. Eapen, Jacqueline M. Jordan, Kihoon Lee, Marcus B. Smolka, James E. Haber
Cell Rep. Author manuscript; available in PMC 2020 May 13.
Published in final edited form as: Cell Rep. 2019 Jul 23; 28(4): 1090–1102.e3. doi: 10.1016/j.celrep.2019.06.068
PMCID:
PMC7218798
AbstractArticlePDF–2.0M
11.
Checkpoint inhibition of origin firing prevents DNA topological stress
Esther C. Morafraile, Christine Hänni, George Allen, Theresa Zeisner, Caroline Clarke, Mark C. Johnson, Miguel M. Santos, Lauren Carroll, Nicola E. Minchell, Jonathan Baxter, Peter Banks, Dave Lydall, Philip Zegerman
Genes Dev. 2019 Nov 1; 33(21-22): 1539–1554. doi: 10.1101/gad.328682.119
PMCID:
PMC6824463
AbstractArticlePDF–5.0M
12.
Network Rewiring of Homologous Recombination Enzymes during Mitotic Proliferation and Meiosis
Philipp Wild, Aitor Susperregui, Ilaria Piazza, Christian Dörig, Ashwini Oke, Meret Arter, Miyuki Yamaguchi, Alexander T. Hilditch, Karla Vuina, Ki Choi Chan, Tatiana Gromova, James E. Haber, Jennifer C. Fung, Paola Picotti, Joao Matos
Mol Cell. 2019 Aug 22; 75(4): 859–874.e4. doi: 10.1016/j.molcel.2019.06.022
PMCID:
PMC6715774
AbstractArticle
13.
A role for Mog1 in H2Bub1 and H3K4me3 regulation affecting RNAPII transcription and mRNA export
Paula Oliete‐Calvo, Joan Serrano‐Quílez, Carme Nuño‐Cabanes, María E Pérez‐Martínez, Luis M Soares, Bernhard Dichtl, Stephen Buratowski, José E Pérez‐Ortín, Susana Rodríguez‐Navarro
EMBO Rep. 2018 Nov; 19(11): e45992. Published online 2018 Sep 24. doi: 10.15252/embr.201845992
PMCID:
PMC6216277
AbstractArticlePDF–1.7M
14.
Investigating the role of Rts1 in DNA replication initiation
Ana B.A. Wallis, Conrad A. Nieduszynski
Version 1. Wellcome Open Res. 2018; 3: 23. Published online 2018 Mar 6. doi: 10.12688/wellcomeopenres.13884.1
PMCID:
PMC5897792
AbstractArticlePDF–1.9M
15.
Rad9/53BP1 protects stalled replication forks from degradation in Mec1/ATR‐defective cells
Matteo Villa, Diego Bonetti, Massimo Carraro, Maria Pia Longhese
EMBO Rep. 2018 Feb; 19(2): 351–367. Published online 2018 Jan 4. doi: 10.15252/embr.201744910
PMCID:
PMC5797966
AbstractArticlePDF–5.0M
16.
Genome-Wide Mapping of Decay Factor–mRNA Interactions in Yeast Identifies Nutrient-Responsive Transcripts as Targets of the Deadenylase Ccr4
Jason E. Miller, Liye Zhang, Haoyang Jiang, Yunfei Li, B. Franklin Pugh, Joseph C. Reese
G3 (Bethesda) 2018 Jan; 8(1): 315–330. Published online 2017 Nov 20. doi: 10.1534/g3.117.300415
PMCID:
PMC5765359
AbstractArticlePDF–2.2M
17.
Exploring Quantitative Yeast Phenomics with Single Cell Analysis of DNA Damage Foci
Erin B. Styles, Karen J. Founk, Lee A. Zamparo, Tina L. Sing, Dogus Altintas, Cyril Ribeyre, Virginie Ribaud, Jacques Rougemont, David Mayhew, Michael Costanzo, Matej Usaj, Adrian J. Verster, Elizabeth N. Koch, Daniele Novarina, Marco Graf, Brian Luke, Marco Muzi-Falconi, Chad L. Myers, Robi David Mitra, David Shore, Grant W. Brown, Zhaolei Zhang, Charles Boone, Brenda J. Andrews
Cell Syst. Author manuscript; available in PMC 2017 Nov 16.
Published in final edited form as: Cell Syst. 2016 Sep 28; 3(3): 264–277.e10. Published online 2016 Sep 8. doi: 10.1016/j.cels.2016.08.008
PMCID:
PMC5689480
AbstractArticlePDF–2.9M
18.
A global interaction network maps a wiring diagram of cellular function
Michael Costanzo, Benjamin VanderSluis, Elizabeth N. Koch, Anastasia Baryshnikova, Carles Pons, Guihong Tan, Wen Wang, Matej Usaj, Julia Hanchard, Susan D. Lee, Vicent Pelechano, Erin B. Styles, Maximilian Billmann, Jolanda van Leeuwen, Nydia van Dyk, Zhen-Yuan Lin, Elena Kuzmin, Justin Nelson, Jeff S. Piotrowski, Tharan Srikumar, Sondra Bahr, Yiqun Chen, Raamesh Deshpande, Christoph F. Kurat, Sheena C. Li, Zhijian Li, Mojca Mattiazzi Usaj, Hiroki Okada, Natasha Pascoe, Bryan-Joseph San Luis, Sara Sharifpoor, Emira Shuteriqi, Scott W. Simpkins, Jamie Snider, Harsha Garadi Suresh, Yizhao Tan, Hongwei Zhu, Noel Malod-Dognin, Vuk Janjic, Natasa Przulj, Olga G. Troyanskaya, Igor Stagljar, Tian Xia, Yoshikazu Ohya, Anne-Claude Gingras, Brian Raught, Michael Boutros, Lars M. Steinmetz, Claire L. Moore, Adam P. Rosebrock, Amy A. Caudy, Chad L. Myers, Brenda Andrews, Charles Boone
Science. Author manuscript; available in PMC 2017 Oct 30.
Published in final edited form as: Science. 2016 Sep 23; 353(6306): aaf1420. doi: 10.1126/science.aaf1420
PMCID:
PMC5661885
AbstractArticlePDF–2.6M
19.
Pre‐initiation complex assembly functions as a molecular switch that splits the Mcm2‐7 double hexamer
Mayumi Miyazawa‐Onami, Hiroyuki Araki, Seiji Tanaka
EMBO Rep. 2017 Oct; 18(10): 1752–1761. Published online 2017 Aug 17. doi: 10.15252/embr.201744206
PMCID:
PMC5623835
AbstractArticlePDF–944K
20.
A cell cycle-independent mode of the Rad9-Dpb11 interaction is induced by DNA damage
Giulia di Cicco, Susanne C. S. Bantele, Karl-Uwe Reusswig, Boris Pfander
Sci Rep. 2017; 7: 11650. Published online 2017 Sep 14. doi: 10.1038/s41598-017-11937-z
PMCID:
PMC5599684
AbstractArticlePDF–3.7M

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