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Select item 107001381.

The social and structural architecture of the yeast protein interactome

André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann

Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5

PMCID:: PMC10700138

Abstract Article PDF–20M

Select item 92098112.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 77187513.

Comprehensive Synthetic Genetic Array Analysis of Alleles That Interact with Mutation of the Saccharomyces cerevisiae RecQ Helicases Hrq1 and Sgs1

Elsbeth Sanders, Phoebe A. Nguyen, Cody M. Rogers, Matthew L. Bochman

G3 (Bethesda) 2020 Dec; 10(12): 4359–4368. Published online 2020 Oct 28. doi: 10.1534/g3.120.401709

PMCID:: PMC7718751

Abstract Article PDF–1.2M

Select item 66157104.

The nucleotide sequence of Saccharomyces cerevisiae chromosome XII

M. Johnston, L. Hillier, L. Riles, other members of the Genome Sequencing Center, K. Albermann, B. André, W. Ansorge, V. Benes, M. Brückner, H. Delius, E. Dubois, A. Düsterhöft, K.-D. Entian, M. Floeth, A. Goffeau, U. Hebling, K. Heumann, D. Heuss-Neitzel, H. Hilbert, F. Hilger, K. Kleine, P. Kötter, E. J. Louis, F. Messenguy, H. W. Mewes, T. Miosga, D. Möstl, S. Müller-Auer, U. Nentwich, B. Obermaier, E. Piravandi, T. M. Pohl, D. Portetelle, B. Purnelle, S. Rechmann, M. Rieger, M. Rinke, M. Rose, M. Scharfe, B. Scherens, P. Scholler, C. Schwager, S. Schwarz, A. P. Underwood, L. A. Urrestarazu, M. Vandenbol, P. Verhasselt, F. Vierendeels, M Voet, G. Volckaert, H. Voss, R. Wambutt, E. Wedler, H. Wedler, F. K. Zimmermann, A. Zollner, J. Hani, J. D. Hoheisel

Nature. Author manuscript; available in PMC 2019 Jul 9.

Published in final edited form as: Nature. 1997 May 29; 387(6632 Suppl): 87–90.

PMCID:: PMC6615710

Abstract Article PDF–424K

Select item 62154095.

Novel phosphorylation states of the yeast spindle pole body

Kimberly K. Fong, Alex Zelter, Beth Graczyk, Jill M. Hoyt, Michael Riffle, Richard Johnson, Michael J. MacCoss, Trisha N. Davis

Biol Open. 2018 Oct 15; 7(10): bio033647. Published online 2018 Jun 14. doi: 10.1242/bio.033647

PMCID:: PMC6215409

Abstract Article PDF–1.1M

Select item 60285386.

The budding yeast RSC complex maintains ploidy by promoting spindle pole body insertion

Tina L. Sing, Minnie P. Hung, Shinsuke Ohnuki, Godai Suzuki, Bryan-Joseph San Luis, Melainia McClain, Jay R. Unruh, Zulin Yu, Jiongwen Ou, Jesse Marshall-Sheppard, Won-Ki Huh, Michael Costanzo, Charles Boone, Yoshikazu Ohya, Sue L. Jaspersen, Grant W. Brown

J Cell Biol. 2018 Jul 2; 217(7): 2445–2462. doi: 10.1083/jcb.201709009

PMCID:: PMC6028538

Abstract Article PDF–2.8M

Select item 59401807.

Network inference reveals novel connections in pathways regulating growth and defense in the yeast salt response

Matthew E. MacGilvray, Evgenia Shishkova, Deborah Chasman, Michael Place, Anthony Gitter, Joshua J. Coon, Audrey P. Gasch

PLoS Comput Biol. 2018 May; 13(5): e1006088. Published online 2018 May 8. doi: 10.1371/journal.pcbi.1006088

PMCID:: PMC5940180

Abstract Article PDF–3.0M

Select item 57653598.

Genome-Wide Mapping of Decay Factor–mRNA Interactions in Yeast Identifies Nutrient-Responsive Transcripts as Targets of the Deadenylase Ccr4

Jason E. Miller, Liye Zhang, Haoyang Jiang, Yunfei Li, B. Franklin Pugh, Joseph C. Reese

G3 (Bethesda) 2018 Jan; 8(1): 315–330. Published online 2017 Nov 20. doi: 10.1534/g3.117.300415

PMCID:: PMC5765359

Abstract Article PDF–2.2M

Select item 56618859.

A global interaction network maps a wiring diagram of cellular function

Michael Costanzo, Benjamin VanderSluis, Elizabeth N. Koch, Anastasia Baryshnikova, Carles Pons, Guihong Tan, Wen Wang, Matej Usaj, Julia Hanchard, Susan D. Lee, Vicent Pelechano, Erin B. Styles, Maximilian Billmann, Jolanda van Leeuwen, Nydia van Dyk, Zhen-Yuan Lin, Elena Kuzmin, Justin Nelson, Jeff S. Piotrowski, Tharan Srikumar, Sondra Bahr, Yiqun Chen, Raamesh Deshpande, Christoph F. Kurat, Sheena C. Li, Zhijian Li, Mojca Mattiazzi Usaj, Hiroki Okada, Natasha Pascoe, Bryan-Joseph San Luis, Sara Sharifpoor, Emira Shuteriqi, Scott W. Simpkins, Jamie Snider, Harsha Garadi Suresh, Yizhao Tan, Hongwei Zhu, Noel Malod-Dognin, Vuk Janjic, Natasa Przulj, Olga G. Troyanskaya, Igor Stagljar, Tian Xia, Yoshikazu Ohya, Anne-Claude Gingras, Brian Raught, Michael Boutros, Lars M. Steinmetz, Claire L. Moore, Adam P. Rosebrock, Amy A. Caudy, Chad L. Myers, Brenda Andrews, Charles Boone

Science. Author manuscript; available in PMC 2017 Oct 30.

Published in final edited form as: Science. 2016 Sep 23; 353(6306): aaf1420. doi: 10.1126/science.aaf1420

PMCID:: PMC5661885

Abstract Article PDF–2.6M

Select item 564803210.

Architecture and dynamics of overlapped RNA regulatory networks

Christopher P. Lapointe, Melanie A. Preston, Daniel Wilinski, Harriet A.J. Saunders, Zachary T. Campbell, Marvin Wickens

RNA. 2017 Nov; 23(11): 1636–1647. doi: 10.1261/rna.062687.117

PMCID:: PMC5648032

Abstract Article PDF–6.6M

Select item 555170911.

Characterization of spindle pole body duplication reveals a regulatory role for nuclear pore complexes

Diana Rüthnick, Annett Neuner, Franziska Dietrich, Daniel Kirrmaier, Ulrike Engel, Michael Knop, Elmar Schiebel

J Cell Biol. 2017 Aug 7; 216(8): 2425–2442. doi: 10.1083/jcb.201612129

PMCID:: PMC5551709

Abstract Article PDF–5.7M

Select item 547375512.

Mapping the Synthetic Dosage Lethality Network of CDK1/CDC28

Christine Zimmermann, Ignacio Garcia, Manja Omerzu, Pierre Chymkowitch, Beibei Zhang, Jorrit M. Enserink

G3 (Bethesda) 2017 Jun; 7(6): 1753–1766. Published online 2017 Apr 18. doi: 10.1534/g3.117.042317

Correction in:: G3 (Bethesda). 2019 Aug; 9(8): 2787.

PMCID:: PMC5473755

Abstract Article PDF–2.7M

Select item 520434813.

A novel translational control mechanism involving RNA structures within coding sequences

Jennifer Jungfleisch, Danny D. Nedialkova, Ivan Dotu, Katherine E. Sloan, Neus Martinez-Bosch, Lukas Brüning, Emanuele Raineri, Pilar Navarro, Markus T. Bohnsack, Sebastian A. Leidel, Juana Díez

Genome Res. 2017 Jan; 27(1): 95–106. doi: 10.1101/gr.209015.116

Correction in:: Genome Res. 2017 Apr; 27(4): 663.

PMCID:: PMC5204348

Abstract Article PDF–1.3M

Select item 467653914.

Sec66-Dependent Regulation of Yeast Spindle-Pole Body Duplication Through Pom152

Santharam S. Katta, Jingjing Chen, Jennifer M. Gardner, Jennifer M. Friederichs, Sarah E. Smith, Madelaine Gogol, Jay R. Unruh, Brian D. Slaughter, Sue L. Jaspersen

Genetics. 2015 Dec; 201(4): 1479–1495. Published online 2015 Oct 26. doi: 10.1534/genetics.115.178012

PMCID:: PMC4676539

Abstract Article PDF–30M

Select item 456468915.

Structured illumination with particle averaging reveals novel roles for yeast centrosome components during duplication

Shannon Burns, Jennifer S Avena, Jay R Unruh, Zulin Yu, Sarah E Smith, Brian D Slaughter, Mark Winey, Sue L Jaspersen

eLife. 2015; 4: e08586. Published online 2015 Sep 15. doi: 10.7554/eLife.08586

PMCID:: PMC4564689

Abstract Article PDF–6.2M

Select item 443181016.

The 4E-BP Caf20p Mediates Both eIF4E-Dependent and Independent Repression of Translation

Lydia M. Castelli, David Talavera, Christopher J. Kershaw, Sarah S. Mohammad-Qureshi, Joseph L. Costello, William Rowe, Paul F. G. Sims, Christopher M. Grant, Simon J. Hubbard, Mark P. Ashe, Graham D. Pavitt

PLoS Genet. 2015 May; 11(5): e1005233. Published online 2015 May 14. doi: 10.1371/journal.pgen.1005233

PMCID:: PMC4431810

Abstract Article PDF–5.5M

Select item 441126417.

Ndj1, a telomere-associated protein, regulates centrosome separation in budding yeast meiosis

Ping Li, Yize Shao, Hui Jin, Hong-Guo Yu

J Cell Biol. 2015 Apr 27; 209(2): 247–259. doi: 10.1083/jcb.201408118

PMCID:: PMC4411264

Abstract Article PDF–3.7M

Select item 419179018.

Cell cycle-regulated oscillator coordinates core histone gene transcription through histone acetylation

Christoph F. Kurat, Jean-Philippe Lambert, Julia Petschnigg, Helena Friesen, Tony Pawson, Adam Rosebrock, Anne-Claude Gingras, Jeffrey Fillingham, Brenda Andrews

Proc Natl Acad Sci U S A. 2014 Sep 30; 111(39): 14124–14129. Published online 2014 Sep 16. doi: 10.1073/pnas.1414024111

PMCID:: PMC4191790

Abstract Article PDF–1.0M

Select item 392695919.

The SUN protein Mps3 controls Ndc1 distribution and function on the nuclear membrane

Jingjing Chen, Christine J. Smoyer, Brian D. Slaughter, Jay R. Unruh, Sue L. Jaspersen

J Cell Biol. 2014 Feb 17; 204(4): 523–539. doi: 10.1083/jcb.201307043

PMCID:: PMC3926959

Abstract Article PDF–4.4M

Select item 382598020.

A Cell Cycle Phosphoproteome of the Yeast Centrosome

Jamie M. Keck, Michele H. Jones, Catherine C. L. Wong, Jonathan Binkley, Daici Chen, Sue L. Jaspersen, Eric P. Holinger, Tao Xu, Mario Niepel, Michael P. Rout, Jackie Vogel, Arend Sidow, John R. Yates, III, Mark Winey

Science. Author manuscript; available in PMC 2013 Nov 13.

Published in final edited form as: Science. 2011 Jun 24; 332(6037): 10.1126/science.1205193. doi: 10.1126/science.1205193

PMCID:: PMC3825980

Abstract Article PDF–1.7M

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