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Items: 1 to 20 of 58

1.
A variant of the Escherichia coli anaerobic transcription factor FNR exhibiting diminished promoter activation function enhances ionizing radiation resistance
Steven T. Bruckbauer, Joseph D. Trimarco, Camille Henry, Elizabeth A. Wood, John R. Battista, Michael M. Cox
PLoS One. 2019; 14(1): e0199482. Published online 2019 Jan 23. doi: 10.1371/journal.pone.0199482
PMCID:
PMC6343905
AbstractArticlePDF–1.9M
2.
Elevated Expression of GlpT and UhpT via FNR Activation Contributes to Increased Fosfomycin Susceptibility in Escherichia coli under Anaerobic Conditions
Kumiko Kurabayashi, Koichi Tanimoto, Shinobu Fueki, Haruyoshi Tomita, Hidetada Hirakawa
Antimicrob Agents Chemother. 2015 Oct; 59(10): 6352–6360. Prepublished online 2015 Jul 27. Published online 2015 Sep 18. doi: 10.1128/AAC.01176-15
PMCID:
PMC4576066
AbstractArticlePDF–640K
3.
FNR Regulates Expression of Important Virulence Factors Contributing to Pathogenicity of Uropathogenic Escherichia coli
Nicolle L. Barbieri, Bryon Nicholson, Ashraf Hussein, Wentong Cai, Yvonne M. Wannemuehler, Giuseppe Dell'Anna, Catherine M. Logue, Fabiana Horn, Lisa K. Nolan, Ganwu Li
Infect Immun. 2014 Dec; 82(12): 5086–5098. doi: 10.1128/IAI.02315-14
PMCID:
PMC4249304
AbstractArticlePDF–1.7M
4.
Influence of association state and DNA binding on the O2-reactivity of [4Fe-4S] fumarate and nitrate reduction (FNR) regulator
Jason C. Crack, Melanie R. Stapleton, Jeffrey Green, Andrew J. Thomson, Nick E. Le Brun
Biochem J. 2014 Oct 1; 463(Pt 1): 83–92. Prepublished online 2014 Jul 14. Published online 2014 Sep 8. doi: 10.1042/BJ20140169
PMCID:
PMC4214427
AbstractArticlePDF–977K
5.
The binary protein-protein interaction landscape of Escherichia coli
Seesandra V. Rajagopala, Patricia Sikorski, Ashwani Kumar, Roberto Mosca, James Vlasblom, Roland Arnold, Jonathan Franca-Koh, Suman B. Pakala, Sadhna Phanse, Arnaud Ceol, Roman Häuser, Gabriella Siszler, Stefan Wuchty, Andrew Emili, Mohan Babu, Patrick Aloy, Rembert Pieper, Peter Uetz
Nat Biotechnol. Author manuscript; available in PMC 2014 Sep 1.
Published in final edited form as: Nat Biotechnol. 2014 Mar; 32(3): 285–290. Published online 2014 Feb 23. doi: 10.1038/nbt.2831
PMCID:
PMC4123855
AbstractArticlePDF–1.1M
6.
Genome-scale Analysis of Escherichia coli FNR Reveals Complex Features of Transcription Factor Binding
Kevin S. Myers, Huihuang Yan, Irene M. Ong, Dongjun Chung, Kun Liang, Frances Tran, Sündüz Keleş, Robert Landick, Patricia J. Kiley
PLoS Genet. 2013 Jun; 9(6): e1003565. Published online 2013 Jun 20. doi: 10.1371/journal.pgen.1003565
PMCID:
PMC3688515
AbstractArticlePDF–4.0M
7.
Regulation of Aerobic-to-Anaerobic Transitions by the FNR Cycle in Escherichia coli
Dean A. Tolla, Michael A. Savageau
J Mol Biol. Author manuscript; available in PMC 2011 Apr 9.
Published in final edited form as: J Mol Biol. 2010 Apr 9; 397(4): 893–905. Published online 2010 Feb 12. doi: 10.1016/j.jmb.2010.02.015
PMCID:
PMC2867928
AbstractArticlePDF–1.6M
8.
DISTILLER: a data integration framework to reveal condition dependency of complex regulons in Escherichia coli
Karen Lemmens, Tijl De Bie, Thomas Dhollander, Sigrid C De Keersmaecker, Inge M Thijs, Geert Schoofs, Ami De Weerdt, Bart De Moor, Jos Vanderleyden, Julio Collado-Vides, Kristof Engelen, Kathleen Marchal
Genome Biol. 2009; 10(3): R27. Published online 2009 Mar 6. doi: 10.1186/gb-2009-10-3-r27
PMCID:
PMC2690998
AbstractArticlePDF–639K
9.
Activation and Repression at the Escherichia coli ynfEFGHI Operon Promoter
Meng Xu, Stephen J. W. Busby, Douglas F. Browning
J Bacteriol. 2009 May; 191(9): 3172–3176. Published online 2009 Feb 27. doi: 10.1128/JB.00040-09
PMCID:
PMC2681810
AbstractArticlePDF–575K
10.
Engineering transcription factors with novel DNA-binding specificity using comparative genomics
Tasha A. Desai, Dmitry A. Rodionov, Mikhail S. Gelfand, Eric J. Alm, Christopher V. Rao
Nucleic Acids Res. 2009 May; 37(8): 2493–2503. Published online 2009 Mar 5. doi: 10.1093/nar/gkp079
PMCID:
PMC2677863
AbstractArticlePDF–2.6M
11.
The O2 sensitivity of the transcription factor FNR is controlled by Ser24 modulating the kinetics of [4Fe-4S] to [2Fe-2S] conversion
Adrian J. Jervis, Jason C. Crack, Gaye White, Peter J. Artymiuk, Myles R. Cheesman, Andrew J. Thomson, Nick E. Le Brun, Jeffrey Green
Proc Natl Acad Sci U S A. 2009 Mar 24; 106(12): 4659–4664. Published online 2009 Mar 4. doi: 10.1073/pnas.0804943106
PMCID:
PMC2660729
AbstractArticlePDF–645K
12.
The impact of O2 on Fe-S cluster biogenesis requirements of Escherichia coli FNR
Erin L. Mettert, F. Wayne Outten, Brendan Wanta, Patricia J. Kiley
J Mol Biol. Author manuscript; available in PMC 2009 Dec 26.
Published in final edited form as: J Mol Biol. 2008 Dec 26; 384(4): 798–811. Published online 2008 Oct 10. doi: 10.1016/j.jmb.2008.09.080
PMCID:
PMC2648814
AbstractArticlePDF–1.6M
13.
Catabolite Repression Control of napF (Periplasmic Nitrate Reductase) Operon Expression in Escherichia coli K-12
Valley Stewart, Peggy J. Bledsoe, Li-Ling Chen, Amie Cai
J Bacteriol. 2009 Feb; 191(3): 996–1005. Published online 2008 Dec 5. doi: 10.1128/JB.00873-08
PMCID:
PMC2632075
AbstractArticlePDF–440K
14.
Dissecting the Role of the N-Terminal Region of the Escherichia coli Global Transcription Factor FNR
Aixin Yan, Patricia J. Kiley
J Bacteriol. 2008 Dec; 190(24): 8230–8233. Published online 2008 Oct 17. doi: 10.1128/JB.01242-08
PMCID:
PMC2593217
AbstractArticlePDF–428K
15.
Cyclic AMP-Dependent Catabolite Repression Is the Dominant Control Mechanism of Metabolic Fluxes under Glucose Limitation in Escherichia coli
Annik Nanchen, Alexander Schicker, Olga Revelles, Uwe Sauer
J Bacteriol. 2008 Apr; 190(7): 2323–2330. Published online 2008 Jan 25. doi: 10.1128/JB.01353-07
PMCID:
PMC2293195
AbstractArticlePDF–568K
16.
Protein abundance profiling of the Escherichia coli cytosol
Yasushi Ishihama, Thorsten Schmidt, Juri Rappsilber, Matthias Mann, F Ulrich Hartl, Michael J Kerner, Dmitrij Frishman
BMC Genomics. 2008; 9: 102. Published online 2008 Feb 27. doi: 10.1186/1471-2164-9-102
PMCID:
PMC2292177
AbstractArticlePDF–1.0M
17.
Reduced Apo-Fumarate Nitrate Reductase Regulator (ApoFNR) as the Major Form of FNR in Aerobically Growing Escherichia coli
F. Reinhart, S. Achebach, T. Koch, G. Unden
J Bacteriol. 2008 Feb; 190(3): 879–886. Published online 2007 Nov 30. doi: 10.1128/JB.01374-07
PMCID:
PMC2223584
AbstractArticlePDF–671K
18.
Activation of yeaR-yoaG Operon Transcription by the Nitrate-Responsive Regulator NarL Is Independent of Oxygen- Responsive Regulator Fnr in Escherichia coli K-12
Hsia-Yin Lin, Peggy J. Bledsoe, Valley Stewart
J Bacteriol. 2007 Nov; 189(21): 7539–7548. Published online 2007 Aug 24. doi: 10.1128/JB.00953-07
PMCID:
PMC2168752
AbstractArticlePDF–159K
19.
The NsrR Regulon of Escherichia coli K-12 Includes Genes Encoding the Hybrid Cluster Protein and the Periplasmic, Respiratory Nitrite Reductase
Nina Filenko, Stephen Spiro, Douglas F. Browning, Derrick Squire, Tim W. Overton, Jeff Cole, Chrystala Constantinidou
J Bacteriol. 2007 Jun; 189(12): 4410–4417. Published online 2007 Apr 20. doi: 10.1128/JB.00080-07
PMCID:
PMC1913375
AbstractArticlePDF–116K
20.
Superoxide-mediated amplification of the oxygen-induced switch from [4Fe-4S] to [2Fe-2S] clusters in the transcriptional regulator FNR
Jason C. Crack, Jeffrey Green, Myles R. Cheesman, Nick E. Le Brun, Andrew J. Thomson
Proc Natl Acad Sci U S A. 2007 Feb 13; 104(7): 2092–2097. Published online 2007 Jan 31. doi: 10.1073/pnas.0609514104
PMCID:
PMC1892919
AbstractArticlePDF–907K

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