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Items: 1 to 20 of 35

1.
Glial control of sphingolipid levels sculpts diurnal remodeling of circadian circuits
John P. Vaughen, Emma Theisen, Irma Magaly Rivas-Serna, Andrew B. Berger, Prateek Kalakuntla, Ina Anreiter, Vera C. Mazurak, Tamy Portillo Rodriguez, Joshua D. Mast, Tom Hartl, Ethan O. Perlstein, Richard J. Reimer, M. Thomas Clandinin, Thomas R. Clandinin
Neuron. Author manuscript; available in PMC 2024 Feb 15.
Published in final edited form as: Neuron. 2022 Oct 5; 110(19): 3186–3205.e7. Published online 2022 Aug 11. doi: 10.1016/j.neuron.2022.07.016
PMCID:
PMC10868424
AbstractArticlePDF–4.2M
2.
Temporal Exposure to Bt Insecticide Causes Oxidative Stress in Larval Midgut Tissue
Biko K. Muita, Simon W. Baxter
Toxins (Basel) 2023 May; 15(5): 323. Published online 2023 May 7. doi: 10.3390/toxins15050323
PMCID:
PMC10220740
AbstractArticlePDF–3.2M
3.
Next-generation large-scale binary protein interaction network for Drosophila melanogaster
Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István A. Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth H. Wan, Joel S. Bader, Dawit Balcha, Wenting Bian, Benjamin W. Booth, Atina G. Coté, Steffi de Rouck, Alice Desbuleux, Kah Yong Goh, Dae-Kyum Kim, Jennifer J. Knapp, Wen Xing Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Julianne Lim, Yifang Liu, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Dayag Sheykhkarimli, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael A. Calderwood, David E. Hill, Susan E. Celniker, Marc Vidal, Norbert Perrimon, Stephanie E. Mohr
Nat Commun. 2023; 14: 2162. Published online 2023 Apr 15. doi: 10.1038/s41467-023-37876-0
PMCID:
PMC10105736
AbstractArticlePDF–3.2M
4.
Neuronal activity induces glucosylceramide that is secreted via exosomes for lysosomal degradation in glia
Liping Wang, Guang Lin, Zhongyuan Zuo, Yarong Li, Seul Kee Byeon, Akhilesh Pandey, Hugo J. Bellen
Sci Adv. 2022 Jul; 8(28): eabn3326. Published online 2022 Jul 13. doi: 10.1126/sciadv.abn3326
PMCID:
PMC9278864
AbstractArticlePDF–9.4M
5.
An expanded toolkit for Drosophila gene tagging using synthesized homology donor constructs for CRISPR-mediated homologous recombination
Oguz Kanca, Jonathan Zirin, Yanhui Hu, Burak Tepe, Debdeep Dutta, Wen-Wen Lin, Liwen Ma, Ming Ge, Zhongyuan Zuo, Lu-Ping Liu, Robert W Levis, Norbert Perrimon, Hugo J Bellen
eLife. 2022; 11: e76077. Published online 2022 Jun 20. doi: 10.7554/eLife.76077
PMCID:
PMC9239680
AbstractArticlePDF–1.2M
6.
Paths and pathways that generate cell-type heterogeneity and developmental progression in hematopoiesis
Juliet R Girard, Lauren M Goins, Dung M Vuu, Mark S Sharpley, Carrie M Spratford, Shreya R Mantri, Utpal Banerjee
eLife. 2021; 10: e67516. Published online 2021 Oct 29. doi: 10.7554/eLife.67516
PMCID:
PMC8610493
AbstractArticlePDF–13M
7.
CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans
Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang
Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119
PMCID:
PMC6961578
AbstractArticlePDF–3.6M
8.
Genome-Wide Association Study of Circadian Behavior in Drosophila melanogaster
Susan T. Harbison, Shailesh Kumar, Wen Huang, Lenovia J. McCoy, Kirklin R. Smith, Trudy F. C. Mackay
Behav Genet. 2019; 49(1): 60–82. Published online 2018 Oct 19. doi: 10.1007/s10519-018-9932-0
PMCID:
PMC6326971
AbstractArticlePDF–1.9M
9.
Time-resolved mapping of genetic interactions to model rewiring of signaling pathways
Florian Heigwer, Christian Scheeder, Thilo Miersch, Barbara Schmitt, Claudia Blass, Mischan Vali Pour Jamnani, Michael Boutros
eLife. 2018; 7: e40174. Published online 2018 Dec 28. doi: 10.7554/eLife.40174
PMCID:
PMC6319608
AbstractArticlePDF–3.4M
10.
Natural variation in sugar tolerance associates with changes in signaling and mitochondrial ribosome biogenesis
Richard G Melvin, Nicole Lamichane, Essi Havula, Krista Kokki, Charles Soeder, Corbin D Jones, Ville Hietakangas
eLife. 2018; 7: e40841. Published online 2018 Nov 27. doi: 10.7554/eLife.40841
PMCID:
PMC6301794
AbstractArticlePDF–4.8M
11.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
AbstractArticlePDF–3.2M
12.
Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster
Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira
RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117
PMCID:
PMC5689002
AbstractArticlePDF–4.0M
13.
Phenotype-based clustering of glycosylation-related genes by RNAi-mediated gene silencing
Miki Yamamoto-Hino, Hideki Yoshida, Tomomi Ichimiya, Sho Sakamura, Megumi Maeda, Yoshinobu Kimura, Norihiko Sasaki, Kiyoko F Aoki-Kinoshita, Akiko Kinoshita-Toyoda, Hidenao Toyoda, Ryu Ueda, Shoko Nishihara, Satoshi Goto
Genes Cells. 2015 Jun; 20(6): 521–542. Published online 2015 May 4. doi: 10.1111/gtc.12246
PMCID:
PMC4682476
AbstractArticlePDF–1.1M
14.
Flexible origin of hydrocarbon/pheromone precursors in Drosophila melanogaster
Claude Wicker-Thomas, Damien Garrido, Gwénaëlle Bontonou, Laura Napal, Nicolas Mazuras, Béatrice Denis, Thomas Rubin, Jean-Philippe Parvy, Jacques Montagne
J Lipid Res. 2015 Nov; 56(11): 2094–2101. doi: 10.1194/jlr.M060368
PMCID:
PMC4617396
AbstractArticlePDF–1.4M
15.
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders
Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937
PMCID:
PMC4528330
AbstractArticlePDF–2.2M
16.
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data
Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929
PMCID:
PMC4528329
AbstractArticlePDF–4.9M
17.
The Release 6 reference sequence of the Drosophila melanogaster genome
Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker
Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114
PMCID:
PMC4352887
AbstractArticlePDF–1022K
18.
Developmental Ethanol Exposure Leads to Dysregulation of Lipid Metabolism and Oxidative Stress in Drosophila
Theresa Logan-Garbisch, Anthony Bortolazzo, Peter Luu, Audrey Ford, David Do, Payam Khodabakhshi, Rachael L. French
G3 (Bethesda) 2015 Jan; 5(1): 49–59. Published online 2014 Nov 11. doi: 10.1534/g3.114.015040
PMCID:
PMC4291469
AbstractArticlePDF–1.4M
19.
Phylostratigraphic Bias Creates Spurious Patterns of Genome Evolution
Bryan A. Moyers, Jianzhi Zhang
Mol Biol Evol. 2015 Jan 1; 32(1): 258–267. Published online 2014 Oct 13. doi: 10.1093/molbev/msu286
Correction in:
Mol Biol Evol. 2016 Nov; 33(11): 3031.
PMCID:
PMC4271527
AbstractArticlePDF–618K
20.
A Global In Vivo Drosophila RNAi Screen Identifies a Key Role of Ceramide Phosphoethanolamine for Glial Ensheathment of Axons
Aniket Ghosh, Tina Kling, Nicolas Snaidero, Julio L. Sampaio, Andrej Shevchenko, Heribert Gras, Bart Geurten, Martin C. Göpfert, Jörg B. Schulz, Aaron Voigt, Mikael Simons
PLoS Genet. 2013 Dec; 9(12): e1003980. Published online 2013 Dec 12. doi: 10.1371/journal.pgen.1003980
PMCID:
PMC3861124
AbstractArticlePDF–6.4M

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