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Items: 1 to 20 of 29

1.
Two sequential gene expression programs bridged by cell division support long-distance collective cell migration
Jingjing Sun, Ayse Damla Durmaz, Aswini Babu, Frank Macabenta, Angelike Stathopoulos
Development. 2024 May 15; 151(10): dev202262. Published online 2024 May 17. doi: 10.1242/dev.202262
PMCID:
PMC11165717
Article
2.
Genetic atlas of hygro-and thermosensory cells in the vinegar fly Drosophila melanogaster
Kristina Corthals, Vilma Andersson, Allison Churcher, Johan Reimegård, Anders Enjin
Sci Rep. 2023; 13: 15202. Published online 2023 Sep 14. doi: 10.1038/s41598-023-42506-2
PMCID:
PMC10502013
ArticlePDF–5.5M
3.
Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes
Ana López-Varea, Patricia Vega-Cuesta, Ana Ruiz-Gómez, Cristina M Ostalé, Cristina Molnar, Covadonga F Hevia, Mercedes Martín, Maria F Organista, Jesus de Celis, Joaquín Culí, Nuria Esteban, Jose F de Celis
G3 (Bethesda) 2021 Dec; 11(12): jkab349. Published online 2021 Oct 2. doi: 10.1093/g3journal/jkab349
PMCID:
PMC8664486
ArticlePDF–3.1M
4.
Single-cell RNA sequencing identifies novel cell types in Drosophila blood
Yulong Fu, Xiaohu Huang, Peng Zhang, Joyce van de Leemput, Zhe Han
J Genet Genomics. Author manuscript; available in PMC 2021 Apr 20.
Published in final edited form as: J Genet Genomics. 2020 Apr 20; 47(4): 175–186. Published online 2020 Mar 9. doi: 10.1016/j.jgg.2020.02.004
PMCID:
PMC7321924
ArticlePDF–2.6M
5.
CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans
Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang
Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119
PMCID:
PMC6961578
ArticlePDF–3.6M
6.
Drosophila Fezf coordinates laminar-specific connectivity through cell-intrinsic and cell-extrinsic mechanisms
Jing Peng, Ivan J Santiago, Curie Ahn, Burak Gur, C Kimberly Tsui, Zhixiao Su, Chundi Xu, Aziz Karakhanyan, Marion Silies, Matthew Y Pecot
eLife. 2018; 7: e33962. Published online 2018 Mar 7. doi: 10.7554/eLife.33962
PMCID:
PMC5854465
ArticlePDF–13M
7.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
ArticlePDF–3.2M
8.
Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster
Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira
RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117
PMCID:
PMC5689002
ArticlePDF–4.0M
9.
Deconstruction of the beaten Path-Sidestep interaction network provides insights into neuromuscular system development
Hanqing Li, Ash Watson, Agnieszka Olechwier, Michael Anaya, Siamak K Sorooshyari, Dermott P Harnett, Hyung-Kook (Peter) Lee, Jost Vielmetter, Mario A Fares, K Christopher Garcia, Engin Özkan, Juan-Pablo Labrador, Kai Zinn
eLife. 2017; 6: e28111. Published online 2017 Aug 15. doi: 10.7554/eLife.28111
PMCID:
PMC5578738
ArticlePDF–5.4M
10.
The Genetic Architecture of Ovariole Number in Drosophila melanogaster: Genes with Major, Quantitative, and Pleiotropic Effects
Amanda S. Lobell, Rachel R. Kaspari, Yazmin L. Serrano Negron, Susan T. Harbison
G3 (Bethesda) 2017 Jul; 7(7): 2391–2403. Published online 2017 May 26. doi: 10.1534/g3.117.042390
PMCID:
PMC5499145
ArticlePDF–1.7M
11.
Ig Superfamily Ligand and Receptor Pairs Expressed in Synaptic Partners in Drosophila
Liming Tan, Kelvin Xi Zhang, Matthew Y. Pecot, Sonal Nagarkar-Jaiswal, Pei-Tseng Lee, Shin-ya Takemura, Jason M. McEwen, Aljoscha Nern, Shuwa Xu, Wael Tadros, Zhenqing Chen, Kai Zinn, Hugo J. Bellen, Marta Morey, S. Lawrence Zipursky
Cell. Author manuscript; available in PMC 2016 Jun 17.
Published in final edited form as: Cell. 2015 Dec 17; 163(7): 1756–1769. doi: 10.1016/j.cell.2015.11.021
PMCID:
PMC4804707
ArticlePDF–3.5M
12.
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders
Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937
PMCID:
PMC4528330
ArticlePDF–2.2M
13.
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data
Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929
PMCID:
PMC4528329
ArticlePDF–4.9M
14.
A library of MiMICs allows tagging of genes and reversible, spatial and temporal knockdown of proteins in Drosophila
Sonal Nagarkar-Jaiswal, Pei-Tseng Lee, Megan E Campbell, Kuchuan Chen, Stephanie Anguiano-Zarate, Manuel Cantu Gutierrez, Theodore Busby, Wen-Wen Lin, Yuchun He, Karen L Schulze, Benjamin W Booth, Martha Evans-Holm, Koen JT Venken, Robert W Levis, Allan C Spradling, Roger A Hoskins, Hugo J Bellen
eLife. 2015; 4: e05338. Published online 2015 Mar 31. doi: 10.7554/eLife.05338
PMCID:
PMC4379497
ArticlePDF–7.7M
15.
The Release 6 reference sequence of the Drosophila melanogaster genome
Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker
Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114
PMCID:
PMC4352887
ArticlePDF–1022K
16.
Genome-wide features of neuroendocrine regulation in Drosophila by the basic helix-loop-helix transcription factor DIMMED
Tarik Hadžić, Dongkook Park, Katharine C. Abruzzi, Lin Yang, Jennifer S. Trigg, Remo Rohs, Michael Rosbash, Paul H. Taghert
Nucleic Acids Res. 2015 Feb 27; 43(4): 2199–2215. Published online 2015 Jan 29. doi: 10.1093/nar/gku1377
PMCID:
PMC4344488
ArticlePDF–5.1M
17.
Phylostratigraphic Bias Creates Spurious Patterns of Genome Evolution
Bryan A. Moyers, Jianzhi Zhang
Mol Biol Evol. 2015 Jan 1; 32(1): 258–267. Published online 2014 Oct 13. doi: 10.1093/molbev/msu286
Correction in:
Mol Biol Evol. 2016 Nov; 33(11): 3031.
PMCID:
PMC4271527
ArticlePDF–618K
18.
The Transcription Factors Islet and Lim3 Combinatorially Regulate Ion Channel Gene Expression
Verena Wolfram, Tony D. Southall, Cengiz Günay, Astrid A. Prinz, Andrea H. Brand, Richard A. Baines
J Neurosci. 2014 Feb 12; 34(7): 2538–2543. doi: 10.1523/JNEUROSCI.4511-13.2014
PMCID:
PMC3921425
ArticlePDF–412K
19.
An extracellular interactome of Immunoglobulin and LRR proteins reveals receptor-ligand networks
Engin Özkan, Robert A. Carrillo, Catharine L. Eastman, Richard Weiszmann, Deepa Waghray, Karl G. Johnson, Kai Zinn, Susan E. Celniker, K. Christopher Garcia
Cell. Author manuscript; available in PMC 2014 Jan 3.
Published in final edited form as: Cell. 2013 Jul 3; 154(1): 228–239. doi: 10.1016/j.cell.2013.06.006
PMCID:
PMC3756661
ArticlePDF–8.0M
20.
High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression
Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras
Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112
PMCID:
PMC3530677
ArticlePDF–1.5M

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