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Select item 83132391.

Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development

Francesco Bedogni, Robert F. Hevner

Front Mol Neurosci. 2021; 14: 686034. Published online 2021 Jul 12. doi: 10.3389/fnmol.2021.686034

PMCID:: PMC8313239

Abstract Article PDF–1.6M

Select item 82577062.

Zfp57 inactivation illustrates the role of ICR methylation in imprinted gene expression during neural differentiation of mouse ESCs

Basilia Acurzio, Ankit Verma, Alessia Polito, Carlo Giaccari, Francesco Cecere, Salvatore Fioriniello, Floriana Della Ragione, Annalisa Fico, Flavia Cerrato, Claudia Angelini, Robert Feil, Andrea Riccio

Sci Rep. 2021; 11: 13802. Published online 2021 Jul 5. doi: 10.1038/s41598-021-93297-3

PMCID:: PMC8257706

Abstract Article PDF–1.9M

Select item 79387703.

BraInMap elucidates the macromolecular connectivity landscape of mammalian brain

Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili

Cell Syst. Author manuscript; available in PMC 2021 Apr 22.

Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003

Correction in:: Cell Syst. 2020 Aug 26; 11(2): 208.

PMCID:: PMC7938770

Abstract Article PDF–2.0M

Select item 78651854.

ZFP57 dictates allelic expression switch of target imprinted genes

Weijun Jiang, Jiajia Shi, Jingjie Zhao, Qiu Wang, Dan Cong, Fenghua Chen, Yu Zhang, Yuhan Liu, Junzheng Zhao, Qian Chen, Linhao Gu, Wenjia Zhou, Chenhang Wang, Zhaoyuan Fang, Shuhui Geng, Wei Xie, Luo-Nan Chen, Yang Yang, Yun Bai, Haodong Lin, Xiajun Li

Proc Natl Acad Sci U S A. 2021 Feb 2; 118(5): e2005377118. Published online 2021 Jan 26. doi: 10.1073/pnas.2005377118

PMCID:: PMC7865185

Abstract Article PDF–1.8M

Select item 63173185.

ZNF445 is a primary regulator of genomic imprinting

Nozomi Takahashi, Andrea Coluccio, Christian W. Thorball, Evarist Planet, Hui Shi, Sandra Offner, Priscilla Turelli, Michael Imbeault, Anne C. Ferguson-Smith, Didier Trono

Genes Dev. 2019 Jan 1; 33(1-2): 49–54. doi: 10.1101/gad.320069.118

PMCID:: PMC6317318

Abstract Article PDF–1.1M

Select item 50414566.

ZFP57 maintains the parent-of-origin-specific expression of the imprinted genes and differentially affects non-imprinted targets in mouse embryonic stem cells

Vincenzo Riso, Marco Cammisa, Harpreet Kukreja, Zahra Anvar, Gaetano Verde, Angela Sparago, Basilia Acurzio, Shraddha Lad, Enza Lonardo, Aditya Sankar, Kristian Helin, Robert Feil, Annalisa Fico, Claudia Angelini, Giovanna Grimaldi, Andrea Riccio

Nucleic Acids Res. 2016 Sep 30; 44(17): 8165–8178. Published online 2016 Jun 1. doi: 10.1093/nar/gkw505

PMCID:: PMC5041456

Abstract Article PDF–4.9M

Select item 47568127.

ZFP57 recognizes multiple and closely spaced sequence motif variants to maintain repressive epigenetic marks in mouse embryonic stem cells

Zahra Anvar, Marco Cammisa, Vincenzo Riso, Ilaria Baglivo, Harpreet Kukreja, Angela Sparago, Michael Girardot, Shraddha Lad, Italia De Feis, Flavia Cerrato, Claudia Angelini, Robert Feil, Paolo V. Pedone, Giovanna Grimaldi, Andrea Riccio

Nucleic Acids Res. 2016 Feb 18; 44(3): 1118–1132. Published online 2015 Oct 19. doi: 10.1093/nar/gkv1059

PMCID:: PMC4756812

Abstract Article PDF–5.7M

Select item 44918748.

Allele-specific binding of ZFP57 in the epigenetic regulation of imprinted and non-imprinted monoallelic expression

Ruslan Strogantsev, Felix Krueger, Kazuki Yamazawa, Hui Shi, Poppy Gould, Megan Goldman-Roberts, Kirsten McEwen, Bowen Sun, Roger Pedersen, Anne C. Ferguson-Smith

Genome Biol. 2015; 16(1): 112. Published online 2015 May 30. doi: 10.1186/s13059-015-0672-7

PMCID:: PMC4491874

Abstract Article PDF–3.1M

Select item 44133529.

Maternal and zygotic Zfp57 modulate NOTCH signaling in cardiac development

Yulia Shamis, Dana E. Cullen, Lizhi Liu, Guan Yang, Sheau-Fang Ng, Lijuan Xiao, Fong T. Bell, Chelsea Ray, Sachiko Takikawa, Ivan P. Moskowitz, Chen-Leng Cai, Xiao Yang, Xiajun Li

Proc Natl Acad Sci U S A. 2015 Apr 21; 112(16): E2020–E2029. Published online 2015 Apr 6. doi: 10.1073/pnas.1415541112

PMCID:: PMC4413352

Abstract Article PDF–2.6M

Select item 393348810.

Human and mouse ZFP57 proteins are functionally interchangeable in maintaining genomic imprinting at multiple imprinted regions in mouse ES cells

Sachiko Takikawa, Xin Wang, Chelsea Ray, Max Vakulenko, Fong T Bell, Xiajun Li

Epigenetics. 2013 Dec 1; 8(12): 1268–1279. Published online 2013 Oct 17. doi: 10.4161/epi.26544

PMCID:: PMC3933488

Abstract Article PDF–1.9M

Select item 388456611.

DNA Recognition of 5-Carboxylcytosine by a Zfp57 Mutant at an Atomic Resolution of 0.97 Å

Yiwei Liu, Yusuf Olatunde Olanrewaju, Xing Zhang, Xiaodong Cheng

Biochemistry. Author manuscript; available in PMC 2014 Dec 23.

Published in final edited form as: Biochemistry. 2013 Dec 23; 52(51): 10.1021/bi401360n. Published online 2013 Nov 20. doi: 10.1021/bi401360n

PMCID:: PMC3884566

Abstract Article PDF–3.4M

Select item 365526212.

Genetic and epigenetic mutations affect the DNA binding capability of human ZFP57 in transient neonatal diabetes type 1

Ilaria Baglivo, Sabrina Esposito, Lucia De Cesare, Angela Sparago, Zahra Anvar, Vincenzo Riso, Marco Cammisa, Roberto Fattorusso, Giovanna Grimaldi, Andrea Riccio, Paolo V. Pedone

FEBS Lett. 2013 May 21; 587(10): 1474–1481. doi: 10.1016/j.febslet.2013.02.045

PMCID:: PMC3655262

Abstract Article

Select item 357241013.

A conditional knockout resource for the genome–wide study of mouse gene function

William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley

Nature. Author manuscript; available in PMC 2013 Feb 14.

Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163

PMCID:: PMC3572410

Abstract Article PDF–1.1M

Select item 348999514.

An atomic model of Zfp57 recognition of CpG methylation within a specific DNA sequence

Yiwei Liu, Hidehiro Toh, Hiroyuki Sasaki, Xing Zhang, Xiaodong Cheng

Genes Dev. 2012 Nov 1; 26(21): 2374–2379. doi: 10.1101/gad.202200.112

PMCID:: PMC3489995

Abstract Article PDF–1.1M

Select item 343984515.

A Genome-Wide Screen to Identify Transcription Factors Expressed in Pelvic Ganglia of the Lower Urinary Tract

Carrie B. Wiese, Sara Ireland, Nicole L. Fleming, Jing Yu, M. Todd Valerius, Kylie Georgas, Han Sheng Chiu, Jane Brennan, Jane Armstrong, Melissa H. Little, Andrew P. McMahon, E. Michelle Southard-Smith

Front Neurosci. 2012; 6: 130. Published online 2012 Sep 12. doi: 10.3389/fnins.2012.00130

PMCID:: PMC3439845

Abstract Article PDF–1.4M

Select item 326589016.

Zinc Finger Protein ZFP57 Requires Its Co-factor to Recruit DNA Methyltransferases and Maintains DNA Methylation Imprint in Embryonic Stem Cells via Its Transcriptional Repression Domain

Xiaopan Zuo, Jipo Sheng, Ho-Tak Lau, Carol M. McDonald, Monica Andrade, Dana E. Cullen, Fong T. Bell, Michelina Iacovino, Michael Kyba, Guoliang Xu, Xiajun Li

J Biol Chem. 2012 Jan 13; 287(3): 2107–2118. Published online 2011 Dec 6. doi: 10.1074/jbc.M111.322644

PMCID:: PMC3265890

Abstract Article PDF–1.5M

Select item 323510517.

Global Gene Expression Analysis of Murine Limb Development

Leila Taher, Nicole M. Collette, Deepa Murugesh, Evan Maxwell, Ivan Ovcharenko, Gabriela G. Loots

PLoS One. 2011; 6(12): e28358. Published online 2011 Dec 9. doi: 10.1371/journal.pone.0028358

PMCID:: PMC3235105

Abstract Article PDF–4.5M

Select item 321032818.

In Embryonic Stem Cells, ZFP57/KAP1 Recognize a Methylated Hexanucleotide to Affect Chromatin and DNA Methylation of Imprinting Control Regions

Simon Quenneville, Gaetano Verde, Andrea Corsinotti, Adamandia Kapopoulou, Johan Jakobsson, Sandra Offner, Ilaria Baglivo, Paolo V. Pedone, Giovanna Grimaldi, Andrea Riccio, Didier Trono

Mol Cell. 2011 Nov 4; 44(3): 361–372. doi: 10.1016/j.molcel.2011.08.032

PMCID:: PMC3210328

Abstract Article

Select item 317805919.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 312173520.

Deterministic and Stochastic Allele Specific Gene Expression in Single Mouse Blastomeres

Fuchou Tang, Catalin Barbacioru, Ellen Nordman, Siqin Bao, Caroline Lee, Xiaohui Wang, Brian B. Tuch, Edith Heard, Kaiqin Lao, M. Azim Surani

PLoS One. 2011; 6(6): e21208. Published online 2011 Jun 23. doi: 10.1371/journal.pone.0021208

PMCID:: PMC3121735

Abstract Article PDF–1.0M

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