PMC Links for GEO Profiles (Select 32143886) - PMC

Select item 88358741.

Global Loss of Core 1-Derived O-Glycans in Mice Leads to High Mortality Due to Acute Kidney Failure and Gastric Ulcers

Riku Suzuki, Yuki Nakamura, Rikako Koiwai, Sayaka Fuseya, Yuka Murakami, Kozue Hagiwara, Takashi Sato, Satoru Takahashi, Takashi Kudo

Int J Mol Sci. 2022 Feb; 23(3): 1273. Published online 2022 Jan 24. doi: 10.3390/ijms23031273

PMCID:: PMC8835874

Abstract Article PDF–5.8M

Select item 74175902.

Cosmc controls B cell homing

Junwei Zeng, Mahmoud Eljalby, Rajindra P. Aryal, Sylvain Lehoux, Kathrin Stavenhagen, Matthew R. Kudelka, Yingchun Wang, Jianmei Wang, Tongzhong Ju, Ulrich H. von Andrian, Richard D. Cummings

Nat Commun. 2020; 11: 3990. Published online 2020 Aug 10. doi: 10.1038/s41467-020-17765-6

PMCID:: PMC7417590

Abstract Article PDF–2.2M

Select item 70526563.

Cosmc-dependent mucin-type O-linked glycosylation is essential for podocyte function

Brian R. Stotter, Brianna E. Talbot, Diane E. Capen, Nadine Artelt, Junwei Zeng, Yasuyuki Matsumoto, Nicole Endlich, Richard D. Cummings, Johannes S. Schlondorff

Am J Physiol Renal Physiol. 2020 Feb 1; 318(2): F518–F530. Published online 2020 Jan 6. doi: 10.1152/ajprenal.00399.2019

PMCID:: PMC7052656

Abstract Article

Select item 68349314.

Cosmc is required for T cell persistence in the periphery

Christopher E Cutler, Mark B Jones, Alicia A Cutler, Amanda Mener, Connie M Arthur, Sean R Stowell, Richard D Cummings

Glycobiology. 2019 Nov; 29(11): 776–788. Published online 2019 Jul 18. doi: 10.1093/glycob/cwz054

PMCID:: PMC6834931

Abstract Article PDF–74M

Select item 62980405.

Irisin Mediates Effects on Bone and Fat via αV Integrin Receptors

Hyeonwoo Kim, Christiane D. Wrann, Mark Jedrychowski, Sara Vidoni, Yukiko Kitase, Kenichi Nagano, Chenhe Zhou, Joshua Chou, Virginia-Jeni A. Parkman, Scott J. Novick, Timothy S. Strutzenberg, Bruce D. Pascal, Phuong T. Le, Daniel J. Brooks, Alexander M. Roche, Kaitlyn K. Gerber, Laura Mattheis, Wenjing Chen, Hua Tu, Mary L. Bouxsein, Patrick R. Griffin, Roland Baron, Clifford J. Rosen, Lynda F. Bonewald, Bruce M. Spiegelman

Cell. Author manuscript; available in PMC 2019 Dec 13.

Published in final edited form as: Cell. 2018 Dec 13; 175(7): 1756–1768.e17. doi: 10.1016/j.cell.2018.10.025

Correction in:: Cell. 2019 Jul 11; 178(2): 507–508.

PMCID:: PMC6298040

Abstract Article PDF–1.2M

Select item 51877396.

Cosmc is an X-linked inflammatory bowel disease risk gene that spatially regulates gut microbiota and contributes to sex-specific risk

Matthew R. Kudelka, Benjamin H. Hinrichs, Trevor Darby, Carlos S. Moreno, Hikaru Nishio, Christopher E. Cutler, Jianmei Wang, Huixia Wu, Junwei Zeng, Yingchun Wang, Tongzhong Ju, Sean R. Stowell, Asma Nusrat, Rheinallt M. Jones, Andrew S. Neish, Richard D. Cummings

Proc Natl Acad Sci U S A. 2016 Dec 20; 113(51): 14787–14792. Published online 2016 Dec 7. doi: 10.1073/pnas.1612158114

PMCID:: PMC5187739

Abstract Article PDF–1.2M

Select item 35724107.

A conditional knockout resource for the genome–wide study of mouse gene function

William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley

Nature. Author manuscript; available in PMC 2013 Feb 14.

Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163

PMCID:: PMC3572410

Abstract Article PDF–1.1M

Select item 34795438.

Platelet biogenesis and functions require correct protein O-glycosylation

Yingchun Wang, Shawn M. Jobe, Xiaokun Ding, Hyojung Choo, David R. Archer, Rongjuan Mi, Tongzhong Ju, Richard D. Cummings

Proc Natl Acad Sci U S A. 2012 Oct 2; 109(40): 16143–16148. Published online 2012 Sep 17. doi: 10.1073/pnas.1208253109

PMCID:: PMC3479543

Abstract Article PDF–852K

Select item 31780599.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 306978810.

Loss of intestinal core 1–derived O-glycans causes spontaneous colitis in mice

Jianxin Fu, Bo Wei, Tao Wen, Malin E.V. Johansson, Xiaowei Liu, Emily Bradford, Kristina A. Thomsson, Samuel McGee, Lilah Mansour, Maomeng Tong, J. Michael McDaniel, Thomas J. Sferra, Jerrold R. Turner, Hong Chen, Gunnar C. Hansson, Jonathan Braun, Lijun Xia

J Clin Invest. 2011 Apr 1; 121(4): 1657–1666. Published online 2011 Mar 7. doi: 10.1172/JCI45538

PMCID:: PMC3069788

Abstract Article PDF–5.9M

Select item 288911611.

Cosmc is an essential chaperone for correct protein O-glycosylation

Yingchun Wang, Tongzhong Ju, Xiaokun Ding, Baoyun Xia, Wenyi Wang, Lijun Xia, Miao He, Richard D. Cummings

Proc Natl Acad Sci U S A. 2010 May 18; 107(20): 9228–9233. Published online 2010 May 3. doi: 10.1073/pnas.0914004107

PMCID:: PMC2889116

Abstract Article PDF–888K

Select item 255627012.

Large-scale gene trapping in C57BL/6N mouse embryonic stem cells

Gwenn M. Hansen, Diane C. Markesich, Michael B. Burnett, Qichao Zhu, Karen M. Dionne, Lizabeth J. Richter, Richard H. Finnell, Arthur T. Sands, Brian P. Zambrowicz, Alejandro Abuin

Genome Res. 2008 Oct; 18(10): 1670–1679. doi: 10.1101/gr.078352.108

PMCID:: PMC2556270

Abstract Article PDF–493K

Select item 31099213.

RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer

Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki

Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600

PMCID:: PMC310992

Abstract Article PDF–3.4M

Select item 31098014.

Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes

Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki

Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100

PMCID:: PMC310980

Abstract Article PDF–1.4M

Select item 30876315.

GenePaint.org: an atlas of gene expression patterns in the mouse embryo

Axel Visel, Christina Thaller, Gregor Eichele

Nucleic Acids Res. 2004 Jan 1; 32(Database issue): D552–D556. doi: 10.1093/nar/gkh029

PMCID:: PMC308763

Abstract Article PDF–253K

Select item 28355416.

Wnk1 kinase deficiency lowers blood pressure in mice: A gene-trap screen to identify potential targets for therapeutic intervention

Brian P. Zambrowicz, Alejandro Abuin, Ramiro Ramirez-Solis, Lizabeth J. Richter, James Piggott, Hector BeltrandelRio, Eric C. Buxton, Joel Edwards, Rick A. Finch, Carl J. Friddle, Anupma Gupta, Gwenn Hansen, Yi Hu, Wenhu Huang, Crystal Jaing, Billie Wayne Key, Jr., Peter Kipp, Buckley Kohlhauff, Zhi-Qing Ma, Diane Markesich, Robert Payne, David G. Potter, Ny Qian, Joseph Shaw, Jeff Schrick, Zheng-Zheng Shi, Mary Jean Sparks, Isaac Van Sligtenhorst, Peter Vogel, Wade Walke, Nianhua Xu, Qichao Zhu, Christophe Person, Arthur T. Sands

Proc Natl Acad Sci U S A. 2003 Nov 25; 100(24): 14109–14114. Published online 2003 Nov 10. doi: 10.1073/pnas.2336103100

Correction in:: Proc Natl Acad Sci U S A. 2004 Mar 23; 101(12): 4332.

PMCID:: PMC283554

Abstract Article PDF–481K

Select item 13924117.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Mammalian Gene Collection (MGC) Program Team

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899

PMCID:: PMC139241

Abstract Article PDF–118K

Select item 13919218.

A unique molecular chaperone Cosmc required for activity of the mammalian core 1 β3-galactosyltransferase

Tongzhong Ju, Richard D. Cummings

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16613–16618. Published online 2002 Dec 3. doi: 10.1073/pnas.262438199

PMCID:: PMC139192

Abstract Article PDF–420K

Select item 1683319.

Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray

Tetsuya S. Tanaka, Saied A. Jaradat, Meng K. Lim, George J. Kargul, Xiaohong Wang, Marija J. Grahovac, Serafino Pantano, Yuri Sano, Yulan Piao, Ramaiah Nagaraja, Hirofumi Doi, William H. Wood, III, Kevin G. Becker, Minoru S. H. Ko

Proc Natl Acad Sci U S A. 2000 Aug 1; 97(16): 9127–9132. doi: 10.1073/pnas.97.16.9127

PMCID:: PMC16833

Abstract Article PDF–847K

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