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Items: 1 to 20 of 33

1.
Mutations in Escherichia coli Polyphosphate Kinase That Lead to Dramatically Increased In Vivo Polyphosphate Levels
Amanda K. Rudat, Arya Pokhrel, Todd J. Green, Michael J. Gray
J Bacteriol. 2018 Mar 15; 200(6): e00697-17. Prepublished online 2018 Jan 8. Published online 2018 Feb 23. doi: 10.1128/JB.00697-17
PMCID:
PMC5826030
AbstractArticlePDF–1.7M
2.
The binary protein-protein interaction landscape of Escherichia coli
Seesandra V. Rajagopala, Patricia Sikorski, Ashwani Kumar, Roberto Mosca, James Vlasblom, Roland Arnold, Jonathan Franca-Koh, Suman B. Pakala, Sadhna Phanse, Arnaud Ceol, Roman Häuser, Gabriella Siszler, Stefan Wuchty, Andrew Emili, Mohan Babu, Patrick Aloy, Rembert Pieper, Peter Uetz
Nat Biotechnol. Author manuscript; available in PMC 2014 Sep 1.
Published in final edited form as: Nat Biotechnol. 2014 Mar; 32(3): 285–290. Published online 2014 Feb 23. doi: 10.1038/nbt.2831
PMCID:
PMC4123855
AbstractArticlePDF–1.1M
3.
Polyphosphate Accumulation in Escherichia coli in Response to Defects in DNA Metabolism
Luciana Amado, Andrei Kuzminov
J Bacteriol. 2009 Dec; 191(24): 7410–7416. Published online 2009 Oct 16. doi: 10.1128/JB.01138-09
PMCID:
PMC2786612
AbstractArticlePDF–1.1M
4.
Phosphate-Enhanced Stationary-Phase Fitness of Escherichia coli Is Related to Inorganic Polyphosphate Level
Lici A. Schurig-Briccio, Ricardo N. Farías, María R. Rintoul, Viviana A. Rapisarda
J Bacteriol. 2009 Jul; 191(13): 4478–4481. Published online 2009 Apr 17. doi: 10.1128/JB.00082-09
PMCID:
PMC2698470
AbstractArticlePDF–257K
5.
Group II Intron Protein Localization and Insertion Sites Are Affected by Polyphosphate
Junhua Zhao, Wei Niu, Jun Yao, Sabine Mohr, Edward M Marcotte, Alan M Lambowitz
PLoS Biol. 2008 Jun; 6(6): e150. Published online 2008 Jun 24. doi: 10.1371/journal.pbio.0060150
PMCID:
PMC2435150
AbstractArticlePDF–849K
6.
Genome-Wide Screening of Genes Required for Swarming Motility in Escherichia coli K-12
Tetsuyoshi Inoue, Ryuji Shingaki, Shotaro Hirose, Kaori Waki, Hirotada Mori, Kazuhiro Fukui
J Bacteriol. 2007 Feb; 189(3): 950–957. Published online 2006 Nov 22. doi: 10.1128/JB.01294-06
PMCID:
PMC1797309
AbstractArticlePDF–141K
7.
Inorganic polyphosphate essential for lytic growth of phages P1 and fd
Li Li, Narayana N. Rao, Arthur Kornberg
Proc Natl Acad Sci U S A. 2007 Feb 6; 104(6): 1794–1799. Published online 2007 Jan 29. doi: 10.1073/pnas.0610763104
PMCID:
PMC1794287
AbstractArticlePDF–696K
8.
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110
Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi
Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049
PMCID:
PMC1681481
AbstractArticlePDF–141K
9.
Large-scale identification of protein–protein interaction of Escherichia coli K-12
Mohammad Arifuzzaman, Maki Maeda, Aya Itoh, Kensaku Nishikata, Chiharu Takita, Rintaro Saito, Takeshi Ara, Kenji Nakahigashi, Hsuan-Cheng Huang, Aki Hirai, Kohei Tsuzuki, Seira Nakamura, Mohammad Altaf-Ul-Amin, Taku Oshima, Tomoya Baba, Natsuko Yamamoto, Tomoyo Kawamura, Tomoko Ioka-Nakamichi, Masanari Kitagawa, Masaru Tomita, Shigehiko Kanaya, Chieko Wada, Hirotada Mori
Genome Res. 2006 May; 16(5): 686–691. doi: 10.1101/gr.4527806
PMCID:
PMC1457052
AbstractArticlePDF–536K
10.
Crystal structure of a polyphosphate kinase and its implications for polyphosphate synthesis
Ye Zhu, Weijun Huang, Sam S K Lee, Wenqing Xu
EMBO Rep. 2005 Jul; 6(7): 681–687. Published online 2005 Jun 10. doi: 10.1038/sj.embor.7400448
PMCID:
PMC1369109
AbstractArticlePDF–549K
11.
Escherichia coli K-12: a cooperatively developed annotation snapshot—2005
Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner
Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405
PMCID:
PMC1325200
AbstractArticlePDF–204K
12.
Polyphosphate kinase regulates error-prone replication by DNA polymerase IV in Escherichia coli
Jeffrey D. Stumpf, Patricia L. Foster
Mol Microbiol. Author manuscript; available in PMC 2005 Dec 15.
Published in final edited form as: Mol Microbiol. 2005 Aug; 57(3): 751–761. doi: 10.1111/j.1365-2958.2005.04724.x
PMCID:
PMC1314974
AbstractArticlePDF–313K
13.
Inorganic polyphosphate in the origin and survival of species
Michael R. W. Brown, Arthur Kornberg
Proc Natl Acad Sci U S A. 2004 Nov 16; 101(46): 16085–16087. Published online 2004 Nov 1. doi: 10.1073/pnas.0406909101
PMCID:
PMC528972
AbstractArticlePDF–147K
14.
Global analysis of Escherichia coli RNA degradosome function using DNA microarrays
Jonathan A. Bernstein, Pei-Hsun Lin, Stanley N. Cohen, Sue Lin-Chao
Proc Natl Acad Sci U S A. 2004 Mar 2; 101(9): 2758–2763. Published online 2004 Feb 23. doi: 10.1073/pnas.0308747101
PMCID:
PMC365694
AbstractArticlePDF–416K
15.
Ribonuclease E organizes the protein interactions in the Escherichia coli RNA degradosome
Nathalie F. Vanzo, Yeun Shan Li, Béatrice Py, Erwin Blum, Christopher F. Higgins, Lelia C. Raynal, Henry M. Krisch, Agamemnon J. Carpousis
Genes Dev. 1998 Sep 1; 12(17): 2770–2781. doi: 10.1101/gad.12.17.2770
PMCID:
PMC317140
AbstractArticlePDF–565K
16.
Reconstitution of a minimal RNA degradosome demonstrates functional coordination between a 3′ exonuclease and a DEAD-box RNA helicase
Glen A. Coburn, Xin Miao, Douglas J. Briant, George A. Mackie
Genes Dev. 1999 Oct 1; 13(19): 2594–2603. doi: 10.1101/gad.13.19.2594
PMCID:
PMC317069
AbstractArticlePDF–600K
17.
RNase E polypeptides lacking a carboxyl-terminal half suppress a mukB mutation in Escherichia coli.
M Kido, K Yamanaka, T Mitani, H Niki, T Ogura, S Hiraga
J Bacteriol. 1996 Jul; 178(13): 3917–3925. doi: 10.1128/jb.178.13.3917-3925.1996
PMCID:
PMC232654
SummaryPDF–537K
18.
Inorganic polyphosphate supports resistance and survival of stationary-phase Escherichia coli.
N N Rao, A Kornberg
J Bacteriol. 1996 Mar; 178(5): 1394–1400. doi: 10.1128/jb.178.5.1394-1400.1996
PMCID:
PMC177814
SummaryPDF–242K
19.
Inorganic polyphosphate: toward making a forgotten polymer unforgettable.
A Kornberg
J Bacteriol. 1995 Feb; 177(3): 491–496. doi: 10.1128/jb.177.3.491-496.1995
PMCID:
PMC176618
SummaryPDF–191K
20.
Manipulation of independent synthesis and degradation of polyphosphate in Escherichia coli for investigation of phosphate secretion from the cell.
S J Van Dien, S Keyhani, C Yang, J D Keasling
Appl Environ Microbiol. 1997 May; 63(5): 1689–1695. doi: 10.1128/aem.63.5.1689-1695.1997
PMCID:
PMC168463
SummaryPDF–299K

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