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Items: 15

1.
Synergy of protease-binding sites within the ecotin homodimer is crucial for inhibition of MASP enzymes and for blocking lectin pathway activation
Zoltán Attila Nagy, Dávid Héja, Dániel Bencze, Bence Kiss, Eszter Boros, Dávid Szakács, Krisztián Fodor, Matthias Wilmanns, Andrea Kocsis, József Dobó, Péter Gál, Veronika Harmat, Gábor Pál
J Biol Chem. 2022 Jun; 298(6): 101985. Published online 2022 Apr 25. doi: 10.1016/j.jbc.2022.101985
Correction in:
J Biol Chem. 2023 Jan; 299(1): 102807.
PMCID:
PMC9136129
AbstractArticlePDF–3.1M
2.
The Serine Protease Domain of MASP-3: Enzymatic Properties and Crystal Structure in Complex with Ecotin
Christine Gaboriaud, Rajesh Kumar Gupta, Lydie Martin, Monique Lacroix, Laurence Serre, Florence Teillet, Gérard J. Arlaud, Véronique Rossi, Nicole M. Thielens
PLoS One. 2013; 8(7): e67962. Published online 2013 Jul 4. doi: 10.1371/journal.pone.0067962
PMCID:
PMC3701661
AbstractArticlePDF–3.5M
3.
Prokaryote-derived protein inhibitors of peptidases: a sketchy occurrence and mostly unknown function
Tomasz Kantyka, Neil D. Rawlings, Jan Potempa
Biochimie. Author manuscript; available in PMC 2011 Nov 1.
Published in final edited form as: Biochimie. 2010 Nov; 92(11): 1644–1656. Published online 2010 Jun 14. doi: 10.1016/j.biochi.2010.06.004
PMCID:
PMC2952067
AbstractArticlePDF–3.7M
4.
Energetics-Based Protein Profiling on a Proteomic Scale: Identification of Proteins Resistant to Proteolysis
Chiwook Park, Sharleen Zhou, Jacqueline Gilmore, Susan Marqusee
J Mol Biol. Author manuscript; available in PMC 2010 Apr 21.
Published in final edited form as: J Mol Biol. 2007 May 18; 368(5): 1426–1437. Published online 2007 Mar 7. doi: 10.1016/j.jmb.2007.02.091
PMCID:
PMC2857998
AbstractArticlePDF–2.6M
5.
Finding Chimeras: a Bioinformatics Strategy for Identification of Cross-linked Peptides
Feixia Chu, Peter R. Baker, Alma L. Burlingame, Robert J. Chalkley
Mol Cell Proteomics. 2010 Jan; 9(1): 25–31. Published online 2009 Oct 6. doi: 10.1074/mcp.M800555-MCP200
PMCID:
PMC2808265
AbstractArticlePDF–229K
6.
Insights into protein flexibility: The relationship between normal modes and conformational change upon protein–protein docking
Sara E. Dobbins, Victor I. Lesk, Michael J. E. Sternberg
Proc Natl Acad Sci U S A. 2008 Jul 29; 105(30): 10390–10395. Published online 2008 Jul 18. doi: 10.1073/pnas.0802496105
PMCID:
PMC2475499
AbstractArticlePDF–687K
7.
Crystal structure analyses of uncomplexed ecotin in two crystal forms: implications for its function and stability.
D. H. Shin, H. K. Song, I. S. Seong, C. S. Lee, C. H. Chung, S. W. Suh
Protein Sci. 1996 Nov; 5(11): 2236–2247. doi: 10.1002/pro.5560051110
PMCID:
PMC2143284
SummaryPDF–6.1M
8.
Ecotin: lessons on survival in a protease-filled world.
M. E. McGrath, S. A. Gillmor, R. J. Fletterick
Protein Sci. 1995 Feb; 4(2): 141–148. doi: 10.1002/pro.5560040201
PMCID:
PMC2143063
SummaryPDF–8.7M
9.
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110
Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi
Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049
PMCID:
PMC1681481
AbstractArticlePDF–141K
10.
Escherichia coli K-12: a cooperatively developed annotation snapshot—2005
Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner
Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405
PMCID:
PMC1325200
AbstractArticlePDF–204K
11.
The periplasmic serine protease inhibitor ecotin protects bacteria against neutrophil elastase.
Christopher T Eggers, Iain A Murray, Valerie A Delmar, Anthony G Day, Charles S Craik
Biochem J. 2004 Apr 1; 379(Pt 1): 107–118. doi: 10.1042/BJ20031790
PMCID:
PMC1224055
SummaryPDF–438K
12.
Macromolecular chelation as an improved mechanism of protease inhibition: structure of the ecotin-trypsin complex.
M E McGrath, T Erpel, C Bystroff, R J Fletterick
EMBO J. 1994 Apr 1; 13(7): 1502–1507. doi: 10.1002/j.1460-2075.1994.tb06411.x
PMCID:
PMC394978
SummaryPage BrowsePDF–1.8M
13.
Characterization of a membrane-associated serine protease in Escherichia coli.
S M Palmer, A C St John
J Bacteriol. 1987 Apr; 169(4): 1474–1479. doi: 10.1128/jb.169.4.1474-1479.1987
PMCID:
PMC211970
SummaryPage BrowsePDF–1.2M
14.
Physical map location of the new Escherichia coli gene eco, encoding the serine protease inhibitor ecotin.
T Erpel, P Hwang, C S Craik, R J Fletterick, M E McGrath
J Bacteriol. 1992 Mar; 174(5): 1704. doi: 10.1128/jb.174.5.1704.1992
PMCID:
PMC206573
SummaryPage BrowsePDF–181K
15.
Reverse biochemistry: Use of macromolecular protease inhibitors to dissect complex biological processes and identify a membrane-type serine protease in epithelial cancer and normal tissue
Toshihiko Takeuchi, Marc A. Shuman, Charles S. Craik
Proc Natl Acad Sci U S A. 1999 Sep 28; 96(20): 11054–11061. doi: 10.1073/pnas.96.20.11054
PMCID:
PMC34240
AbstractArticlePDF–325K

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