PMC Links for GEO Profiles (Select 33128714) - PMC

Roman Praschberger, Sabine Kuenen, Nils Schoovaerts, Natalie Kaempf, Jeevanjot Singh, Jasper Janssens, Jef Swerts, Eliana Nachman, Carles Calatayud, Stein Aerts, Suresh Poovathingal, Patrik Verstreken

Neuron. 2023 May 17; 111(10): 1577–1590.e11. doi: 10.1016/j.neuron.2023.02.033

PMCID:: PMC10191620

Abstract Article

Select item 91887564.

Systematic expression profiling of Dpr and DIP genes reveals cell surface codes in Drosophila larval motor and sensory neurons

Yupu Wang, Meike Lobb-Rabe, James Ashley, Purujit Chatterjee, Veera Anand, Hugo J. Bellen, Oguz Kanca, Robert A. Carrillo

Development. 2022 May 15; 149(10): dev200355. Published online 2022 May 19. doi: 10.1242/dev.200355

PMCID:: PMC9188756

Abstract Article

Select item 88834435.

Single‐cell RNA sequencing of motoneurons identifies regulators of synaptic wiring in Drosophila embryos

Jessica Velten, Xuefan Gao, Patrick Van Nierop y Sanchez, Katrin Domsch, Rashi Agarwal, Lena Bognar, Malte Paulsen, Lars Velten, Ingrid Lohmann

Mol Syst Biol. 2022 Mar; 18(3): e10255. Published online 2022 Feb 28. doi: 10.15252/msb.202110255

PMCID:: PMC8883443

Abstract Article PDF–3.0M

Select item 79724546.

Investigation of Drosophila fruitless neurons that express Dpr/DIP cell adhesion molecules

Savannah G Brovero, Julia C Fortier, Hongru Hu, Pamela C Lovejoy, Nicole R Newell, Colleen M Palmateer, Ruei-Ying Tzeng, Pei-Tseng Lee, Kai Zinn, Michelle N Arbeitman

eLife. 2021; 10: e63101. Published online 2021 Feb 22. doi: 10.7554/eLife.63101

PMCID:: PMC7972454

Abstract Article PDF–17M

Select item 71954917.

DIP/Dpr interactions and the evolutionary design of specificity in protein families

Alina P. Sergeeva, Phinikoula S. Katsamba, Filip Cosmanescu, Joshua J. Brewer, Goran Ahlsen, Seetha Mannepalli, Lawrence Shapiro, Barry Honig

Nat Commun. 2020; 11: 2125. Published online 2020 May 1. doi: 10.1038/s41467-020-15981-8

PMCID:: PMC7195491

Abstract Article PDF–3.6M

Select item 69615788.

CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans

Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang

Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119

PMCID:: PMC6961578

Abstract Article PDF–3.6M

Select item 65255119.

Family of neural wiring receptors in bilaterians defined by phylogenetic, biochemical, and structural evidence

Shouqiang Cheng, Yeonwoo Park, Justyna D. Kurleto, Mili Jeon, Kai Zinn, Joseph W. Thornton, Engin Özkan

Proc Natl Acad Sci U S A. 2019 May 14; 116(20): 9837–9842. Published online 2019 May 1. doi: 10.1073/pnas.1818631116

PMCID:: PMC6525511

Abstract Article PDF–1.3M

Select item 630922410.

Neuron sub-type specific expression, interaction affinities, and specificity determinants of DIP/Dpr cell recognition proteins

Filip Cosmanescu, Phinikoula S. Katsamba, Alina P. Sergeeva, Goran Ahlsen, Saurabh D. Patel, Joshua J. Brewer, Liming Tan, Shuwa Xu, Qi Xiao, Sonal Nagarkar-Jaiswal, Aljoscha Nern, Hugo Bellen, S. Lawrence Zipursky, Barry Honig, Lawrence Shapiro

Neuron. Author manuscript; available in PMC 2019 Dec 19.

Published in final edited form as: Neuron. 2018 Dec 19; 100(6): 1385–1400.e6. Published online 2018 Nov 19. doi: 10.1016/j.neuron.2018.10.046

PMCID:: PMC6309224

Abstract Article PDF–3.3M

Select item 568900211.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 492804712.

Cold acclimation wholly reorganizes the Drosophila melanogaster transcriptome and metabolome

Heath A. MacMillan, Jose M. Knee, Alice B. Dennis, Hiroko Udaka, Katie E. Marshall, Thomas J. S. Merritt, Brent J. Sinclair

Sci Rep. 2016; 6: 28999. Published online 2016 Jun 30. doi: 10.1038/srep28999

PMCID:: PMC4928047

Abstract Article PDF–3.1M

Select item 488965813.

mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster

Gildas Lepennetier, Francesco Catania

G3 (Bethesda) 2016 Jun; 6(6): 1617–1626. Published online 2016 Mar 28. doi: 10.1534/g3.116.029231

PMCID:: PMC4889658

Abstract Article PDF–1.5M

Select item 480470714.

Ig Superfamily Ligand and Receptor Pairs Expressed in Synaptic Partners in Drosophila

Liming Tan, Kelvin Xi Zhang, Matthew Y. Pecot, Sonal Nagarkar-Jaiswal, Pei-Tseng Lee, Shin-ya Takemura, Jason M. McEwen, Aljoscha Nern, Shuwa Xu, Wael Tadros, Zhenqing Chen, Kai Zinn, Hugo J. Bellen, Marta Morey, S. Lawrence Zipursky

Cell. Author manuscript; available in PMC 2016 Jun 17.

Published in final edited form as: Cell. 2015 Dec 17; 163(7): 1756–1769. doi: 10.1016/j.cell.2015.11.021

PMCID:: PMC4804707

Abstract Article PDF–3.5M

Select item 472025915.

Control of synaptic connectivity by a network of Drosophila IgSF cell surface proteins

Robert A. Carrillo, Engin Özkan, Kaushiki P. Menon, Sonal Nagarkar-Jaiswal, Pei-Tseng Lee, Mili Jeon, Michael E. Birnbaum, Hugo J. Bellen, K. Christopher Garcia, Kai Zinn

Cell. Author manuscript; available in PMC 2016 Dec 17.

Published in final edited form as: Cell. 2015 Dec 17; 163(7): 1770–1782. doi: 10.1016/j.cell.2015.11.022

PMCID:: PMC4720259

Abstract Article PDF–2.7M

Select item 452833016.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 452832917.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

Select item 439805018.

The Genetic Basis for Variation in Olfactory Behavior in Drosophila melanogaster

Gunjan H. Arya, Michael M. Magwire, Wen Huang, Yazmin L. Serrano-Negron, Trudy F.C. Mackay, Robert R.H. Anholt

Chem Senses. 2015 May; 40(4): 233–243. Published online 2015 Feb 15. doi: 10.1093/chemse/bjv001

PMCID:: PMC4398050

Abstract Article PDF–8.9M

Select item 435288719.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114

PMCID:: PMC4352887

Abstract Article PDF–1022K

Select item 412555320.

From fat fruitfly to human obesity

Wanli W. Smith, Joseph Thomas, Jingnan Liu, Tianxia Li, Timothy H. Moran

Physiol Behav. Author manuscript; available in PMC 2015 Sep 1.

Published in final edited form as: Physiol Behav. 2014 Sep; 0: 15–21. Published online 2014 Feb 6. doi: 10.1016/j.physbeh.2014.01.017

PMCID:: PMC4125553

Abstract Article PDF–203K

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