PMC Links for GEO Profiles (Select 33142577) - PMC

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Items: 17

Select item 107001381.

The social and structural architecture of the yeast protein interactome

André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann

Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5

PMCID:: PMC10700138

Abstract Article PDF–20M

Select item 102333682.

A systematic proximity ligation approach to studying protein‐substrate specificity identifies the substrate spectrum of the Ssh1 translocon

Nir Cohen, Naama Aviram, Maya Schuldiner

EMBO J. 2023 Jun; 42(11): e113385. Published online 2023 Apr 19. doi: 10.15252/embj.2022113385

PMCID:: PMC10233368

Abstract Article PDF–1.2M

Select item 92098113.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 68929224.

A novel ER membrane protein Ehg1/May24 plays a critical role in maintaining multiple nutrient permeases in yeast under high-pressure perturbation

Goyu Kurosaka, Satoshi Uemura, Takahiro Mochizuki, Yuri Kozaki, Akiko Hozumi, Sayuri Suwa, Ryoga Ishii, Yusuke Kato, Saki Imura, Natsuho Ishida, Yoichi Noda, Fumiyoshi Abe

Sci Rep. 2019; 9: 18341. Published online 2019 Dec 4. doi: 10.1038/s41598-019-54925-1

PMCID:: PMC6892922

Abstract Article PDF–5.4M

Select item 61539505.

Acetaminophen reduces the protein levels of high affinity amino acid permeases and causes tryptophan depletion

Angelina Huseinovic, Stefan J. Dekker, Bob Boogaard, Nico. P. E. Vermeulen, Jan M. Kooter, J. Chris Vos

Amino Acids. 2018; 50(10): 1377–1390. Published online 2018 Jul 5. doi: 10.1007/s00726-018-2613-8

PMCID:: PMC6153950

Abstract Article PDF–2.5M

Select item 56480326.

Architecture and dynamics of overlapped RNA regulatory networks

Christopher P. Lapointe, Melanie A. Preston, Daniel Wilinski, Harriet A.J. Saunders, Zachary T. Campbell, Marvin Wickens

RNA. 2017 Nov; 23(11): 1636–1647. doi: 10.1261/rna.062687.117

PMCID:: PMC5648032

Abstract Article PDF–6.6M

Select item 54737557.

Mapping the Synthetic Dosage Lethality Network of CDK1/CDC28

Christine Zimmermann, Ignacio Garcia, Manja Omerzu, Pierre Chymkowitch, Beibei Zhang, Jorrit M. Enserink

G3 (Bethesda) 2017 Jun; 7(6): 1753–1766. Published online 2017 Apr 18. doi: 10.1534/g3.117.042317

Correction in:: G3 (Bethesda). 2019 Aug; 9(8): 2787.

PMCID:: PMC5473755

Abstract Article PDF–2.7M

Select item 49655538.

A Plasma Membrane Association Module in Yeast Amino Acid Transporters

Dušan Popov-Čeleketić, Frans Bianchi, Stephanie J. Ruiz, Febrina Meutiawati, Bert Poolman

J Biol Chem. 2016 Jul 29; 291(31): 16024–16037. Published online 2016 May 19. doi: 10.1074/jbc.M115.706770

PMCID:: PMC4965553

Abstract Article PDF–3.6M

Select item 48698359.

One library to make them all: Streamlining yeast library creation by a SWAp-Tag (SWAT) strategy

Ido Yofe, Uri Weill, Matthias Meurer, Silvia Chuartzman, Einat Zalckvar, Omer Goldman, Shifra Ben-Dor, Conny Schütze, Nils Wiedemann, Michael Knop, Anton Khmelinskii, Maya Schuldiner

Nat Methods. Author manuscript; available in PMC 2016 Sep 22.

Published in final edited form as: Nat Methods. 2016 Apr; 13(4): 371–378. Published online 2016 Feb 29. doi: 10.1038/nmeth.3795

PMCID:: PMC4869835

Abstract Article PDF–2.7M

Select item 470795210.

Protein-RNA networks revealed through covalent RNA marks

Christopher P. Lapointe, Daniel Wilinski, Harriet A. J. Saunders, Marvin Wickens

Nat Methods. Author manuscript; available in PMC 2016 May 18.

Published in final edited form as: Nat Methods. 2015 Dec; 12(12): 1163–1170. Published online 2015 Nov 2. doi: 10.1038/nmeth.3651

PMCID:: PMC4707952

Abstract Article PDF–856K

Select item 470301211.

Target selection by natural and redesigned PUF proteins

Douglas F. Porter, Yvonne Y. Koh, Brett VanVeller, Ronald T. Raines, Marvin Wickens

Proc Natl Acad Sci U S A. 2015 Dec 29; 112(52): 15868–15873. Published online 2015 Dec 14. doi: 10.1073/pnas.1508501112

PMCID:: PMC4703012

Abstract Article PDF–1.3M

Select item 347297112.

Selective Inhibition of HER2-Positive Breast Cancer Cells by the HIV Protease Inhibitor Nelfinavir

Joong Sup Shim, Rajini Rao, Kristin Beebe, Len Neckers, Inkyu Han, Rita Nahta, Jun O. Liu

J Natl Cancer Inst. 2012 Oct 17; 104(20): 1576–1590. Published online 2012 Oct 5. doi: 10.1093/jnci/djs396

PMCID:: PMC3472971

Abstract Article PDF–16M

Select item 338420813.

Multiplex assay for condition-dependent changes in protein–protein interactions

Ulrich Schlecht, Molly Miranda, Sundari Suresh, Ronald W. Davis, Robert P. St.Onge

Proc Natl Acad Sci U S A. 2012 Jun 5; 109(23): 9213–9218. Published online 2012 May 21. doi: 10.1073/pnas.1204952109

PMCID:: PMC3384208

Abstract Article PDF–2.9M

Select item 331716014.

Functional wiring of the yeast kinome revealed by global analysis of genetic network motifs

Sara Sharifpoor, Dewald van Dyk, Michael Costanzo, Anastasia Baryshnikova, Helena Friesen, Alison C. Douglas, Ji-Young Youn, Benjamin VanderSluis, Chad L. Myers, Balázs Papp, Charles Boone, Brenda J. Andrews

Genome Res. 2012 Apr; 22(4): 791–801. doi: 10.1101/gr.129213.111