PMC Links for GEO Profiles (Select 33142963) - PMC

Imke Ensinck, Alexander Maman, Waleed S Albihlal, Michelangelo Lassandro, Giulia Salzano, Theodora Sideri, Steven A Howell, Enrica Calvani, Harshil Patel, Guy Bushkin, Markus Ralser, Ambrosius P Snijders, Mark Skehel, Ana Casañal, Schraga Schwartz, Folkert J van Werven

eLife. 2023; 12: RP87860. Published online 2023 Jul 25. doi: 10.7554/eLife.87860

PMCID:: PMC10393049

Abstract Article PDF–4.1M

Select item 92098114.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 67340035.

Accurate detection of m⁶A RNA modifications in native RNA sequences

Huanle Liu, Oguzhan Begik, Morghan C. Lucas, Jose Miguel Ramirez, Christopher E. Mason, David Wiener, Schraga Schwartz, John S. Mattick, Martin A. Smith, Eva Maria Novoa

Nat Commun. 2019; 10: 4079. Published online 2019 Sep 9. doi: 10.1038/s41467-019-11713-9

PMCID:: PMC6734003

Abstract Article PDF–1.5M

Select item 66674716.

m⁶A modification of a 3′ UTR site reduces RME1 mRNA levels to promote meiosis

G. Guy Bushkin, David Pincus, Jeffrey T. Morgan, Kris Richardson, Caroline Lewis, Sze Ham Chan, David P. Bartel, Gerald R. Fink

Nat Commun. 2019; 10: 3414. Published online 2019 Jul 30. doi: 10.1038/s41467-019-11232-7

PMCID:: PMC6667471

Abstract Article PDF–1.5M

Select item 65895667.

Selective defects in gene expression control genome instability in yeast splicing mutants

Annie S. Tam, Tianna S. Sihota, Karissa L. Milbury, Anni Zhang, Veena Mathew, Peter C. Stirling

Mol Biol Cell. 2019 Jan 15; 30(2): 191–200. doi: 10.1091/mbc.E18-07-0439

PMCID:: PMC6589566

Abstract Article PDF–5.1M

Select item 62162778.

A role for Mog1 in H2Bub1 and H3K4me3 regulation affecting RNAPII transcription and mRNA export

Paula Oliete‐Calvo, Joan Serrano‐Quílez, Carme Nuño‐Cabanes, María E Pérez‐Martínez, Luis M Soares, Bernhard Dichtl, Stephen Buratowski, José E Pérez‐Ortín, Susana Rodríguez‐Navarro

EMBO Rep. 2018 Nov; 19(11): e45992. Published online 2018 Sep 24. doi: 10.15252/embr.201845992

PMCID:: PMC6216277

Abstract Article PDF–1.7M

Select item 56618859.

A global interaction network maps a wiring diagram of cellular function

Michael Costanzo, Benjamin VanderSluis, Elizabeth N. Koch, Anastasia Baryshnikova, Carles Pons, Guihong Tan, Wen Wang, Matej Usaj, Julia Hanchard, Susan D. Lee, Vicent Pelechano, Erin B. Styles, Maximilian Billmann, Jolanda van Leeuwen, Nydia van Dyk, Zhen-Yuan Lin, Elena Kuzmin, Justin Nelson, Jeff S. Piotrowski, Tharan Srikumar, Sondra Bahr, Yiqun Chen, Raamesh Deshpande, Christoph F. Kurat, Sheena C. Li, Zhijian Li, Mojca Mattiazzi Usaj, Hiroki Okada, Natasha Pascoe, Bryan-Joseph San Luis, Sara Sharifpoor, Emira Shuteriqi, Scott W. Simpkins, Jamie Snider, Harsha Garadi Suresh, Yizhao Tan, Hongwei Zhu, Noel Malod-Dognin, Vuk Janjic, Natasa Przulj, Olga G. Troyanskaya, Igor Stagljar, Tian Xia, Yoshikazu Ohya, Anne-Claude Gingras, Brian Raught, Michael Boutros, Lars M. Steinmetz, Claire L. Moore, Adam P. Rosebrock, Amy A. Caudy, Chad L. Myers, Brenda Andrews, Charles Boone

Science. Author manuscript; available in PMC 2017 Oct 30.

Published in final edited form as: Science. 2016 Sep 23; 353(6306): aaf1420. doi: 10.1126/science.aaf1420

PMCID:: PMC5661885

Abstract Article PDF–2.6M

Select item 556652710.

The m⁶A methyltransferase Ime4 epitranscriptionally regulates triacylglycerol metabolism and vacuolar morphology in haploid yeast cells

Pradeep Kumar Yadav, Ram Rajasekharan

J Biol Chem. 2017 Aug 18; 292(33): 13727–13744. Published online 2017 Jun 27. doi: 10.1074/jbc.M117.783761

PMCID:: PMC5566527

Abstract Article PDF–4.8M

Select item 510085411.

Temporal Expression of a Master Regulator Drives Synchronous Sporulation in Budding Yeast

Minghao Chia, Folkert J. van Werven

G3 (Bethesda) 2016 Nov; 6(11): 3553–3560. Published online 2016 Sep 6. doi: 10.1534/g3.116.034983

PMCID:: PMC5100854

Abstract Article PDF–1.3M

Select item 505508312.

Functional Metabolomics Describes the Yeast Biosynthetic Regulome

Michael Mülleder, Enrica Calvani, Mohammad Tauqeer Alam, Richard Kangda Wang, Florian Eckerstorfer, Aleksej Zelezniak, Markus Ralser

Cell. 2016 Oct 6; 167(2): 553–565.e12. doi: 10.1016/j.cell.2016.09.007

PMCID:: PMC5055083

Abstract Article PDF–3.9M

Select item 395611813.

High-resolution mapping reveals a conserved, widespread, dynamic meiotically regulated mRNA methylation program

Schraga Schwartz, Sudeep D. Agarwala, Maxwell R. Mumbach, Marko Jovanovic, Philipp Mertins, Alexander Shishkin, Yuval Tabach, Tarjei S Mikkelsen, Rahul Satija, Gary Ruvkun, Steven A. Carr, Eric S. Lander, Gerald R. Fink, Aviv Regev

Cell. Author manuscript; available in PMC 2014 Jun 5.

Published in final edited form as: Cell. 2013 Dec 5; 155(6): 1409–1421. Published online 2013 Nov 21. doi: 10.1016/j.cell.2013.10.047