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Select item 108724771.

Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle

Michael J. O’Brien, Athar Ansari

Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.

Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968

PMCID:: PMC10872477

Abstract Article PDF–1.7M

Select item 107001382.

The social and structural architecture of the yeast protein interactome

André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann

Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5

PMCID:: PMC10700138

Abstract Article PDF–20M

Select item 105517003.

Misregulation of cell cycle-dependent methylation of budding yeast CENP-A contributes to chromosomal instability

Prashant K. Mishra, Wei-Chun Au, Pedro G. Castineira, Nazrin Ali, John Stanton, Lars Boeckmann, Yoshimitsu Takahashi, Michael Costanzo, Charles Boone, Kerry S. Bloom, Peter H. Thorpe, Munira A. Basrai

Mol Biol Cell. 2023 Sep 1; 34(10): ar99. Published online 2023 Aug 17. doi: 10.1091/mbc.E23-03-0108

PMCID:: PMC10551700

Abstract Article PDF–3.7M

Select item 103819654.

Cryo-EM structure of the complete inner kinetochore of the budding yeast point centromere

Tom Dendooven, Ziguo Zhang, Jing Yang, Stephen H. McLaughlin, Johannes Schwab, Sjors H. W. Scheres, Stanislau Yatskevich, David Barford

Sci Adv. 2023 Jul; 9(30): eadg7480. Published online 2023 Jul 28. doi: 10.1126/sciadv.adg7480

PMCID:: PMC10381965

Abstract Article PDF–2.1M

Select item 102333685.

A systematic proximity ligation approach to studying protein‐substrate specificity identifies the substrate spectrum of the Ssh1 translocon

Nir Cohen, Naama Aviram, Maya Schuldiner

EMBO J. 2023 Jun; 42(11): e113385. Published online 2023 Apr 19. doi: 10.15252/embj.2022113385

PMCID:: PMC10233368

Abstract Article PDF–1.2M

Select item 96309866.

A balancing act: interactions within NuA4/TIP60 regulate picNuA4 function in Saccharomyces cerevisiae and humans

Phoebe Y T Lu, Alyssa C Kirlin, Maria J Aristizabal, Hilary T Brewis, Nancy Lévesque, Dheva T Setiaputra, Nikita Avvakumov, Joris J Benschop, Marian Groot Koerkamp, Frank C P Holstege, Nevan J Krogan, Calvin K Yip, Jacques Côté, Michael S Kobor

Genetics. 2022 Nov; 222(3): iyac136. Published online 2022 Sep 6. doi: 10.1093/genetics/iyac136

PMCID:: PMC9630986

Abstract Article PDF–2.2M

Select item 92098117.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 81787548.

Ctf3/CENP-I provides a docking site for the desumoylase Ulp2 at the kinetochore

Yun Quan, Stephen M. Hinshaw, Pang-Che Wang, Stephen C. Harrison, Huilin Zhou

J Cell Biol. 2021 Aug 2; 220(8): e202012149. Published online 2021 Jun 3. doi: 10.1083/jcb.202012149

PMCID:: PMC8178754

Abstract Article PDF–3.9M

Select item 80049149.

SCRaMbLE: A Study of Its Robustness and Challenges through Enhancement of Hygromycin B Resistance in a Semi-Synthetic Yeast

Jun Yang Ong, Reem Swidah, Marco Monti, Daniel Schindler, Junbiao Dai, Yizhi Cai

Bioengineering (Basel) 2021 Mar; 8(3): 42. Published online 2021 Mar 23. doi: 10.3390/bioengineering8030042

PMCID:: PMC8004914

Abstract Article PDF–4.2M

Select item 784627710.

The Proteomic Landscape of Centromeric Chromatin Reveals an Essential Role for the Ctf19^CCAN Complex in Meiotic Kinetochore Assembly

Weronika E. Borek, Nadine Vincenten, Eris Duro, Vasso Makrantoni, Christos Spanos, Krishna K. Sarangapani, Flavia de Lima Alves, David A. Kelly, Charles L. Asbury, Juri Rappsilber, Adele L. Marston

Curr Biol. 2021 Jan 25; 31(2): 283–296.e7. doi: 10.1016/j.cub.2020.10.025

PMCID:: PMC7846277

Abstract Article

Select item 753684311.

A dCas9-Based System Identifies a Central Role for Ctf19 in Kinetochore-Derived Suppression of Meiotic Recombination

Lisa-Marie Kuhl, Vasso Makrantoni, Sarah Recknagel, Animish N. Vaze, Adele L. Marston, Gerben Vader

Genetics. 2020 Oct; 216(2): 395–408. Published online 2020 Aug 25. doi: 10.1534/genetics.120.303384

PMCID:: PMC7536843

Abstract Article PDF–1.7M

Select item 736768512.

Reconstitution reveals two paths of force transmission through the kinetochore

Grace E Hamilton, Luke A Helgeson, Cameron L Noland, Charles L Asbury, Yoana N Dimitrova, Trisha N Davis

eLife. 2020; 9: e56582. Published online 2020 May 14. doi: 10.7554/eLife.56582

PMCID:: PMC7367685

Abstract Article PDF–2.5M

Select item 732543513.

A genetic interaction map centered on cohesin reveals auxiliary factors involved in sister chromatid cohesion in S. cerevisiae

Su Ming Sun, Amandine Batté, Mireille Elmer, Sophie C. van der Horst, Tibor van Welsem, Gordon Bean, Trey Ideker, Fred van Leeuwen, Haico van Attikum

J Cell Sci. 2020 May 15; 133(10): jcs237628. Published online 2020 May 22. doi: 10.1242/jcs.237628

PMCID:: PMC7325435

Abstract Article

Select item 707185414.

The ATAD2/ANCCA homolog Yta7 cooperates with Scm3^HJURP to deposit Cse4^CENP-A at the centromere in yeast

Sara Shahnejat-Bushehri, Ann E. Ehrenhofer-Murray

Proc Natl Acad Sci U S A. 2020 Mar 10; 117(10): 5386–5393. Published online 2020 Feb 20. doi: 10.1073/pnas.1917814117

PMCID:: PMC7071854

Abstract Article PDF–1.1M

Select item 685907415.

Structure of the inner kinetochore CCAN complex assembled onto a centromeric nucleosome

Kaige Yan, Jing Yang, Ziguo Zhang, Stephen H. McLaughlin, Leifu Chang, Domenico Fasci, Ann E. Ehrenhofer-Murray, Albert J.R. Heck, David Barford

Nature. Author manuscript; available in PMC 2020 Apr 2.

Published in final edited form as: Nature. 2019 Oct; 574(7777): 278–282. Published online 2019 Oct 2. doi: 10.1038/s41586-019-1609-1

PMCID:: PMC6859074

Abstract Article PDF–7.3M

Select item 660580116.

The stoichiometry of the outer kinetochore is modulated by microtubule-proximal regulatory factors

Karthik Dhatchinamoorthy, Jay R. Unruh, Jeffrey J. Lange, Michaella Levy, Brian D. Slaughter, Jennifer L. Gerton

J Cell Biol. 2019 Jul 1; 218(7): 2124–2135. Published online 2019 May 22. doi: 10.1083/jcb.201810070

PMCID:: PMC6605801

Abstract Article PDF–2.6M

Select item 660257917.

The structure of the yeast Ctf3 complex

Stephen M Hinshaw, Andrew N Dates, Stephen C Harrison

eLife. 2019; 8: e48215. Published online 2019 Jun 13. doi: 10.7554/eLife.48215

PMCID:: PMC6602579

Abstract Article PDF–2.5M

Select item 654639518.

The COMA complex interacts with Cse4 and positions Sli15/Ipl1 at the budding yeast inner kinetochore

Josef Fischböck-Halwachs, Sylvia Singh, Mia Potocnjak, Götz Hagemann, Victor Solis-Mezarino, Stephan Woike, Medini Ghodgaonkar-Steger, Florian Weissmann, Laura D Gallego, Julie Rojas, Jessica Andreani, Alwin Köhler, Franz Herzog

eLife. 2019; 8: e42879. Published online 2019 May 21. doi: 10.7554/eLife.42879

PMCID:: PMC6546395

Abstract Article PDF–5.9M

Select item 640792319.

The structure of the Ctf19c/CCAN from budding yeast

Stephen M Hinshaw, Stephen C Harrison

eLife. 2019; 8: e44239. Published online 2019 Feb 14. doi: 10.7554/eLife.44239

Correction in:: eLife. 2020; 9: e56553.

PMCID:: PMC6407923

Abstract Article PDF–5.8M

Select item 621571320.

Systematic Analysis of Complex Genetic Interactions

Elena Kuzmin, Benjamin VanderSluis, Wen Wang, Guihong Tan, Raamesh Deshpande, Yiqun Chen, Matej Usaj, Attila Balint, Mojca Mattiazzi Usaj, Jolanda van Leeuwen, Elizabeth N. Koch, Carles Pons, Andrius J. Dagilis, Michael Pryszlak, Jason Zi Yang Wang, Julia Hanchard, Margot Riggi, Kaicong Xu, Hamed Heydari, Bryan-Joseph San Luis, Ermira Shuteriqi, Hongwei Zhu, Nydia Van Dyk, Sara Sharifpoor, Michael Costanzo, Robbie Loewith, Amy Caudy, Daniel Bolnick, Grant W. Brown, Brenda J. Andrews, Charles Boone, Chad L. Myers

Science. Author manuscript; available in PMC 2018 Nov 4.

Published in final edited form as: Science. 2018 Apr 20; 360(6386): eaao1729. doi: 10.1126/science.aao1729

PMCID:: PMC6215713

Abstract Article PDF–1.9M

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