PMC Links for GEO Profiles (Select 33146869) - PMC

Select item 102333681.

A systematic proximity ligation approach to studying protein‐substrate specificity identifies the substrate spectrum of the Ssh1 translocon

Nir Cohen, Naama Aviram, Maya Schuldiner

EMBO J. 2023 Jun; 42(11): e113385. Published online 2023 Apr 19. doi: 10.15252/embj.2022113385

PMCID:: PMC10233368

Abstract Article PDF–1.2M

Select item 92098112.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 79690013.

The SR-protein Npl3 is an essential component of the meiotic splicing regulatory network in Saccharomyces cerevisiae

Rima Sandhu, Aniketa Sinha, Ben Montpetit

Nucleic Acids Res. 2021 Mar 18; 49(5): 2552–2568. Published online 2021 Feb 12. doi: 10.1093/nar/gkab071

PMCID:: PMC7969001

Abstract Article PDF–5.8M

Select item 56618854.

A global interaction network maps a wiring diagram of cellular function

Michael Costanzo, Benjamin VanderSluis, Elizabeth N. Koch, Anastasia Baryshnikova, Carles Pons, Guihong Tan, Wen Wang, Matej Usaj, Julia Hanchard, Susan D. Lee, Vicent Pelechano, Erin B. Styles, Maximilian Billmann, Jolanda van Leeuwen, Nydia van Dyk, Zhen-Yuan Lin, Elena Kuzmin, Justin Nelson, Jeff S. Piotrowski, Tharan Srikumar, Sondra Bahr, Yiqun Chen, Raamesh Deshpande, Christoph F. Kurat, Sheena C. Li, Zhijian Li, Mojca Mattiazzi Usaj, Hiroki Okada, Natasha Pascoe, Bryan-Joseph San Luis, Sara Sharifpoor, Emira Shuteriqi, Scott W. Simpkins, Jamie Snider, Harsha Garadi Suresh, Yizhao Tan, Hongwei Zhu, Noel Malod-Dognin, Vuk Janjic, Natasa Przulj, Olga G. Troyanskaya, Igor Stagljar, Tian Xia, Yoshikazu Ohya, Anne-Claude Gingras, Brian Raught, Michael Boutros, Lars M. Steinmetz, Claire L. Moore, Adam P. Rosebrock, Amy A. Caudy, Chad L. Myers, Brenda Andrews, Charles Boone

Science. Author manuscript; available in PMC 2017 Oct 30.

Published in final edited form as: Science. 2016 Sep 23; 353(6306): aaf1420. doi: 10.1126/science.aaf1420

PMCID:: PMC5661885

Abstract Article PDF–2.6M

Select item 48487585.

An inter‐species protein–protein interaction network across vast evolutionary distance

Quan Zhong, Samuel J Pevzner, Tong Hao, Yang Wang, Roberto Mosca, Jörg Menche, Mikko Taipale, Murat Taşan, Changyu Fan, Xinping Yang, Patrick Haley, Ryan R Murray, Flora Mer, Fana Gebreab, Stanley Tam, Andrew MacWilliams, Amélie Dricot, Patrick Reichert, Balaji Santhanam, Lila Ghamsari, Michael A Calderwood, Thomas Rolland, Benoit Charloteaux, Susan Lindquist, Albert‐László Barabási, David E Hill, Patrick Aloy, Michael E Cusick, Yu Xia, Frederick P Roth, Marc Vidal

Mol Syst Biol. 2016 Apr; 12(4): 865. Published online 2016 Apr 23. doi: 10.15252/msb.20156484

PMCID:: PMC4848758

Abstract Article PDF–2.1M

Select item 31623306.

Defining the Mer1 and Nam8 meiotic splicing regulons by cDNA rescue

Zhicheng R. Qiu, Beate Schwer, Stewart Shuman

RNA. 2011 Sep; 17(9): 1648–1654. doi: 10.1261/rna.2792011

PMCID:: PMC3162330

Abstract Article PDF–395K

Select item 31412327.

An essential role for trimethylguanosine RNA caps in Saccharomyces cerevisiae meiosis and their requirement for splicing of SAE3 and PCH2 meiotic pre-mRNAs

Zhicheng R. Qiu, Stewart Shuman, Beate Schwer

Nucleic Acids Res. 2011 Jul; 39(13): 5633–5646. Published online 2011 Mar 11. doi: 10.1093/nar/gkr083

PMCID:: PMC3141232

Abstract Article PDF–5.5M

Select item 30829128.

Determinants of Nam8-dependent splicing of meiotic pre-mRNAs

Zhicheng R. Qiu, Beate Schwer, Stewart Shuman

Nucleic Acids Res. 2011 Apr; 39(8): 3427–3445. Published online 2011 Jan 5. doi: 10.1093/nar/gkq1328

PMCID:: PMC3082912

Abstract Article PDF–13M

Select item 29940429.

Integration of a splicing regulatory network within the meiotic gene expression program of Saccharomyces cerevisiae

Elizabeth M. Munding, A. Haller Igel, Lily Shiue, Kristel M. Dorighi, Lisa R. Treviño, Manuel Ares, Jr

Genes Dev. 2010 Dec 1; 24(23): 2693–2704. doi: 10.1101/gad.1977410

PMCID:: PMC2994042

Abstract Article PDF–895K

Select item 229311810.

Snu56p Is Required for Mer1p-Activated Meiotic Splicing

Richard J. Balzer, Michael F. Henry

Mol Cell Biol. 2008 Apr; 28(8): 2497–2508. Published online 2008 Feb 11. doi: 10.1128/MCB.00405-07

PMCID:: PMC2293118

Abstract Article PDF–522K

Select item 199573511.

A Protein Interaction Map of the Mitotic Spindle

Jonathan Wong, Yuko Nakajima, Stefan Westermann, Ching Shang, Jung-seog Kang, Crystal Goodner, Pantea Houshmand, Stanley Fields, Clarence S.M. Chan, David Drubin, Georjana Barnes, Tony Hazbun

Mol Biol Cell. 2007 Oct; 18(10): 3800–3809. doi: 10.1091/mbc.E07-06-0536